Result of FASTA (omim) for
pF1KB6374
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6374, 276 aa
1>>>pF1KB6374 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8067+/-0.000443; mu= -6.1158+/- 0.027
mean_var=248.0544+/-50.292, 0's: 0 Z-trim(118.0): 77 B-trim: 272 in 1/53
Lambda= 0.081433
statistics sampled from 30354 (30433) to 30354 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.357), width: 16
Scan time: 7.550
The best scores are: opt bits E(85289)
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276) 1741 217.3 2.5e-56
NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 900 118.5 1.3e-26
NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Hom ( 261) 900 118.5 1.3e-26
NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 900 118.5 1.3e-26
NP_001313509 (OMIM: 603217) syntaxin-7 isoform b [ ( 239) 812 108.1 1.6e-23
XP_011534480 (OMIM: 603217) PREDICTED: syntaxin-7 ( 239) 812 108.1 1.6e-23
NP_001191797 (OMIM: 603233,603666) syntaxin-16 iso ( 272) 329 51.4 2.1e-06
NP_003754 (OMIM: 603233,603666) syntaxin-16 isofor ( 304) 329 51.5 2.3e-06
NP_001128245 (OMIM: 603233,603666) syntaxin-16 iso ( 308) 329 51.5 2.3e-06
NP_001128244 (OMIM: 603233,603666) syntaxin-16 iso ( 321) 329 51.5 2.4e-06
NP_001001433 (OMIM: 603233,603666) syntaxin-16 iso ( 325) 329 51.5 2.4e-06
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 321 50.5 4.2e-06
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 321 50.5 4.2e-06
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 321 50.5 4.2e-06
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 321 50.5 4.2e-06
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 321 50.5 4.3e-06
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 ( 289) 321 50.5 4.3e-06
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 311 49.3 9.6e-06
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 ( 319) 311 49.4 1e-05
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 305 48.6 1.5e-05
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo ( 288) 305 48.6 1.6e-05
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2 ( 260) 303 48.4 1.7e-05
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 303 48.4 1.8e-05
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 303 48.4 2e-05
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 303 48.4 2e-05
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4 ( 293) 295 47.5 3.6e-05
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295) 295 47.5 3.6e-05
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 294 47.3 3.7e-05
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 294 47.3 3.7e-05
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 ( 287) 294 47.3 3.8e-05
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297) 294 47.3 3.9e-05
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 291 47.0 4.9e-05
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3 ( 269) 280 45.7 0.00011
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 280 45.7 0.00012
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219) 274 44.9 0.00016
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2 ( 213) 271 44.5 0.0002
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3 ( 192) 269 44.3 0.00021
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2 ( 214) 263 43.6 0.00038
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2 ( 277) 265 43.9 0.00039
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2 ( 309) 265 43.9 0.00043
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2 ( 317) 262 43.6 0.00056
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4 ( 154) 235 40.2 0.0028
>>NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens] (276 aa)
initn: 1741 init1: 1741 opt: 1741 Z-score: 1132.3 bits: 217.3 E(85289): 2.5e-56
Smith-Waterman score: 1741; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_803 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_803 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 QRRVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEVAITEQDLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_803 QRRVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEVAITEQDLEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_803 IKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRA
190 200 210 220 230 240
250 260 270
pF1KB6 AYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
::::::::::::::::::::::::::::::::::::
NP_803 AYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
250 260 270
>>NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [Homo (261 aa)
initn: 667 init1: 667 opt: 900 Z-score: 598.7 bits: 118.5 E(85289): 1.3e-26
Smith-Waterman score: 900; 53.8% identity (84.6% similar) in 266 aa overlap (8-270:1-257)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
: .:: .: : ... : :.:::.:.: ...:. ..:::: ::: .:.
NP_001 MSYTPGVGG----DPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELR
10 20 30 40
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
..::: :. ::::::::.. .::.:::: . :::::...::.::. .:...:.::: :
NP_001 QQLQQKQQYTNQLAKETDKYIKEFGSLP--TTPSEQRQRKIQKDRLVAEFTTSLTNFQKV
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 QRRVSEKEKESIARARAGSRLSA---EERQREEQLVSFDSHEEWNQMQSQEDEVAITEQD
::...:.::: .::.::.::.:. :. ..:..:::..:. . :.: :..: :::.:
NP_001 QRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQ-PQVQVQDEE--ITEDD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQL
:.::.:::..::::::::.:.:.:::::.::::.:::.:::::::::..::::..:..::
NP_001 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL
170 180 190 200 210 220
240 250 260 270
pF1KB6 QRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
.::: ::.:::: .::..:.: . . :..::::
NP_001 SRAADYQRKSRKTLCIIILILVIGVAIISLIIWGLNH
230 240 250 260
>>NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Homo sa (261 aa)
initn: 667 init1: 667 opt: 900 Z-score: 598.7 bits: 118.5 E(85289): 1.3e-26
Smith-Waterman score: 900; 53.8% identity (84.6% similar) in 266 aa overlap (8-270:1-257)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
: .:: .: : ... : :.:::.:.: ...:. ..:::: ::: .:.
NP_003 MSYTPGVGG----DPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELR
10 20 30 40
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
..::: :. ::::::::.. .::.:::: . :::::...::.::. .:...:.::: :
NP_003 QQLQQKQQYTNQLAKETDKYIKEFGSLP--TTPSEQRQRKIQKDRLVAEFTTSLTNFQKV
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 QRRVSEKEKESIARARAGSRLSA---EERQREEQLVSFDSHEEWNQMQSQEDEVAITEQD
::...:.::: .::.::.::.:. :. ..:..:::..:. . :.: :..: :::.:
NP_003 QRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQ-PQVQVQDEE--ITEDD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQL
:.::.:::..::::::::.:.:.:::::.::::.:::.:::::::::..::::..:..::
NP_003 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL
170 180 190 200 210 220
240 250 260 270
pF1KB6 QRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
.::: ::.:::: .::..:.: . . :..::::
NP_003 SRAADYQRKSRKTLCIIILILVIGVAIISLIIWGLNH
230 240 250 260
>>NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [Homo (261 aa)
initn: 667 init1: 667 opt: 900 Z-score: 598.7 bits: 118.5 E(85289): 1.3e-26
Smith-Waterman score: 900; 53.8% identity (84.6% similar) in 266 aa overlap (8-270:1-257)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
: .:: .: : ... : :.:::.:.: ...:. ..:::: ::: .:.
NP_001 MSYTPGVGG----DPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELR
10 20 30 40
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
..::: :. ::::::::.. .::.:::: . :::::...::.::. .:...:.::: :
NP_001 QQLQQKQQYTNQLAKETDKYIKEFGSLP--TTPSEQRQRKIQKDRLVAEFTTSLTNFQKV
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 QRRVSEKEKESIARARAGSRLSA---EERQREEQLVSFDSHEEWNQMQSQEDEVAITEQD
::...:.::: .::.::.::.:. :. ..:..:::..:. . :.: :..: :::.:
NP_001 QRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQ-PQVQVQDEE--ITEDD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQL
:.::.:::..::::::::.:.:.:::::.::::.:::.:::::::::..::::..:..::
NP_001 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL
170 180 190 200 210 220
240 250 260 270
pF1KB6 QRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
.::: ::.:::: .::..:.: . . :..::::
NP_001 SRAADYQRKSRKTLCIIILILVIGVAIISLIIWGLNH
230 240 250 260
>>NP_001313509 (OMIM: 603217) syntaxin-7 isoform b [Homo (239 aa)
initn: 575 init1: 575 opt: 812 Z-score: 543.4 bits: 108.1 E(85289): 1.6e-23
Smith-Waterman score: 812; 53.4% identity (83.7% similar) in 251 aa overlap (8-255:1-239)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
: .:: .: : ... : :.:::.:.: ...:. ..:::: ::: .:.
NP_001 MSYTPGVGG----DPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELR
10 20 30 40
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
..::: :. ::::::::.. .::.:::: . :::::...::.::. .:...:.::: :
NP_001 QQLQQKQQYTNQLAKETDKYIKEFGSLP--TTPSEQRQRKIQKDRLVAEFTTSLTNFQKV
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 QRRVSEKEKESIARARAGSRLSA---EERQREEQLVSFDSHEEWNQMQSQEDEVAITEQD
::...:.::: .::.::.::.:. :. ..:..:::..:. . :.: :..: :::.:
NP_001 QRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQ-PQVQVQDEE--ITEDD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQL
:.::.:::..::::::::.:.:.:::::.::::.:::.:::::::::..::::..:..::
NP_001 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL
170 180 190 200 210 220
240 250 260 270
pF1KB6 QRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
.::: ::::. :.:.
NP_001 SRAADYQKKDS---CMLM
230
>>XP_011534480 (OMIM: 603217) PREDICTED: syntaxin-7 isof (239 aa)
initn: 575 init1: 575 opt: 812 Z-score: 543.4 bits: 108.1 E(85289): 1.6e-23
Smith-Waterman score: 812; 53.4% identity (83.7% similar) in 251 aa overlap (8-255:1-239)
10 20 30 40 50 60
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
: .:: .: : ... : :.:::.:.: ...:. ..:::: ::: .:.
XP_011 MSYTPGVGG----DPAQLAQRISSNIQKITQCSVEIQRTLNQLGTPQDSPELR
10 20 30 40
70 80 90 100 110 120
pF1KB6 ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
..::: :. ::::::::.. .::.:::: . :::::...::.::. .:...:.::: :
XP_011 QQLQQKQQYTNQLAKETDKYIKEFGSLP--TTPSEQRQRKIQKDRLVAEFTTSLTNFQKV
50 60 70 80 90 100
130 140 150 160 170
pF1KB6 QRRVSEKEKESIARARAGSRLSA---EERQREEQLVSFDSHEEWNQMQSQEDEVAITEQD
::...:.::: .::.::.::.:. :. ..:..:::..:. . :.: :..: :::.:
XP_011 QRQAAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWESQTQ-PQVQVQDEE--ITEDD
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQL
:.::.:::..::::::::.:.:.:::::.::::.:::.:::::::::..::::..:..::
XP_011 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL
170 180 190 200 210 220
240 250 260 270
pF1KB6 QRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
.::: ::::. :.:.
XP_011 SRAADYQKKDS---CMLM
230
>>NP_001191797 (OMIM: 603233,603666) syntaxin-16 isoform (272 aa)
initn: 316 init1: 292 opt: 329 Z-score: 235.9 bits: 51.4 E(85289): 2.1e-06
Smith-Waterman score: 329; 29.3% identity (62.5% similar) in 256 aa overlap (17-268:23-267)
10 20 30 40 50
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQ
:. : . :: : :.. . :.... . : .
NP_001 MALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 DSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAAL
::: :. . .. .:..... .. . . .:: :. : :. ::... :.:
NP_001 DSS---EEEHAIEITTQEITQLFHRCQRAVQALP-----SRARACSEQEGRLLGNVVASL
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 NNFQAVQR-RVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQSQ---EDE
::.:. .: .. .: : .: .. . .. .:. .. : . . ::.
NP_001 A--QALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDD-NTLYHRGFTEDQ
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHV
....::. ...::: :::. .: :.:.::.::. :: .:: ..: :. :::.: ...
NP_001 LVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKT
170 180 190 200 210 220
240 250 260 270
pF1KB6 ERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
: . .::..: ::::.:: . ::.: . .:.::. :.
NP_001 EDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR
230 240 250 260 270
>>NP_003754 (OMIM: 603233,603666) syntaxin-16 isoform b (304 aa)
initn: 316 init1: 292 opt: 329 Z-score: 235.2 bits: 51.5 E(85289): 2.3e-06
Smith-Waterman score: 329; 29.3% identity (62.5% similar) in 256 aa overlap (17-268:55-299)
10 20 30 40
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNL
:. : . :: : :.. . :....
NP_003 AEQLADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDK
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB6 MSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERL
. : .::: :. . .. .:..... .. . . .:: :. : :. ::
NP_003 HLNRPTLDDSS---EEEHAIEITTQEITQLFHRCQRAVQALP-----SRARACSEQEGRL
90 100 110 120 130
110 120 130 140 150 160
pF1KB6 MNDFSAALNNFQAVQR-RVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQ
... :.: ::.:. .: .. .: : .: .. . .. .:. .. : .
NP_003 LGNVVASLA--QALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDD-NTLY
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB6 SQ---EDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN
. ::.....::. ...::: :::. .: :.:.::.::. :: .:: ..: :. :
NP_003 HRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN
200 210 220 230 240 250
230 240 250 260 270
pF1KB6 VESSEVHVERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
::.: ...: . .::..: ::::.:: . ::.: . .:.::. :.
NP_003 VEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR
260 270 280 290 300
>>NP_001128245 (OMIM: 603233,603666) syntaxin-16 isoform (308 aa)
initn: 316 init1: 292 opt: 329 Z-score: 235.1 bits: 51.5 E(85289): 2.3e-06
Smith-Waterman score: 329; 29.3% identity (62.5% similar) in 256 aa overlap (17-268:59-303)
10 20 30 40
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNL
:. : . :: : :.. . :....
NP_001 LDELADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDK
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB6 MSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERL
. : .::: :. . .. .:..... .. . . .:: :. : :. ::
NP_001 HLNRPTLDDSS---EEEHAIEITTQEITQLFHRCQRAVQALP-----SRARACSEQEGRL
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB6 MNDFSAALNNFQAVQR-RVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQ
... :.: ::.:. .: .. .: : .: .. . .. .:. .. : .
NP_001 LGNVVASLA--QALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDD-NTLY
150 160 170 180 190
170 180 190 200 210 220
pF1KB6 SQ---EDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN
. ::.....::. ...::: :::. .: :.:.::.::. :: .:: ..: :. :
NP_001 HRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN
200 210 220 230 240 250
230 240 250 260 270
pF1KB6 VESSEVHVERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
::.: ...: . .::..: ::::.:: . ::.: . .:.::. :.
NP_001 VEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR
260 270 280 290 300
>>NP_001128244 (OMIM: 603233,603666) syntaxin-16 isoform (321 aa)
initn: 315 init1: 292 opt: 329 Z-score: 234.9 bits: 51.5 E(85289): 2.4e-06
Smith-Waterman score: 329; 29.3% identity (62.5% similar) in 256 aa overlap (17-268:72-316)
10 20 30 40
pF1KB6 MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNL
:. : . :: : :.. . :....
NP_001 IAALADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDK
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB6 MSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERL
. : .::: :. . .. .:..... .. . . .:: :. : :. ::
NP_001 HLNRPTLDDSS---EEEHAIEITTQEITQLFHRCQRAVQALP-----SRARACSEQEGRL
110 120 130 140 150
110 120 130 140 150 160
pF1KB6 MNDFSAALNNFQAVQR-RVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEEWNQMQ
... :.: ::.:. .: .. .: : .: .. . .. .:. .. : .
NP_001 LGNVVASLA--QALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDD-NTLY
160 170 180 190 200 210
170 180 190 200 210 220
pF1KB6 SQ---EDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN
. ::.....::. ...::: :::. .: :.:.::.::. :: .:: ..: :. :
NP_001 HRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN
220 230 240 250 260 270
230 240 250 260 270
pF1KB6 VESSEVHVERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
::.: ...: . .::..: ::::.:: . ::.: . .:.::. :.
NP_001 VEQSCIKTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR
280 290 300 310 320
276 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:49:10 2016 done: Fri Nov 4 22:49:11 2016
Total Scan time: 7.550 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]