Result of FASTA (omim) for
pF1KB6393
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6393, 276 aa
1>>>pF1KB6393 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0024+/-0.000291; mu= 11.7279+/- 0.018
mean_var=84.4881+/-17.935, 0's: 0 Z-trim(118.2): 188 B-trim: 1656 in 1/55
Lambda= 0.139533
statistics sampled from 30662 (30908) to 30662 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.362), width: 16
Scan time: 7.850
The best scores are: opt bits E(85289)
NP_001039021 (OMIM: 601099) src-like-adapter isofo ( 276) 1870 385.8 4.7e-107
NP_001039022 (OMIM: 601099) src-like-adapter isofo ( 293) 1870 385.8 5e-107
NP_006739 (OMIM: 601099) src-like-adapter isoform ( 316) 1870 385.8 5.3e-107
NP_001269894 (OMIM: 601099) src-like-adapter isofo ( 168) 1120 234.7 8.8e-62
XP_016869228 (OMIM: 601099) PREDICTED: src-like-ad ( 168) 1120 234.7 8.8e-62
NP_001269893 (OMIM: 601099) src-like-adapter isofo ( 249) 803 171.0 2e-42
NP_115590 (OMIM: 606577) src-like-adapter 2 isofor ( 261) 630 136.2 6.3e-32
XP_016883587 (OMIM: 606577) PREDICTED: src-like-ad ( 288) 475 105.0 1.7e-22
NP_778252 (OMIM: 606577) src-like-adapter 2 isofor ( 210) 472 104.3 2e-22
XP_011539756 (OMIM: 153390,615758) PREDICTED: tyro ( 516) 390 88.0 3.9e-17
XP_011539755 (OMIM: 153390,615758) PREDICTED: tyro ( 516) 390 88.0 3.9e-17
NP_001317397 (OMIM: 153390,615758) tyrosine-protei ( 458) 387 87.4 5.3e-17
NP_001165602 (OMIM: 142370) tyrosine-protein kinas ( 504) 336 77.1 7.1e-14
NP_001165600 (OMIM: 142370) tyrosine-protein kinas ( 505) 336 77.1 7.1e-14
NP_001165604 (OMIM: 142370) tyrosine-protein kinas ( 505) 336 77.1 7.1e-14
NP_001165603 (OMIM: 142370) tyrosine-protein kinas ( 506) 336 77.1 7.1e-14
NP_001165601 (OMIM: 142370) tyrosine-protein kinas ( 525) 336 77.2 7.4e-14
NP_002101 (OMIM: 142370) tyrosine-protein kinase H ( 526) 336 77.2 7.4e-14
XP_011542131 (OMIM: 191305,613375) PREDICTED: tyro ( 344) 321 74.0 4.2e-13
XP_011542130 (OMIM: 191305,613375) PREDICTED: tyro ( 345) 321 74.0 4.2e-13
NP_001317394 (OMIM: 191305,613375) tyrosine-protei ( 434) 321 74.1 5.1e-13
XP_011542129 (OMIM: 191305,613375) PREDICTED: tyro ( 460) 321 74.1 5.3e-13
NP_001706 (OMIM: 191305,613375) tyrosine-protein k ( 505) 321 74.1 5.8e-13
XP_011542126 (OMIM: 191305,613375) PREDICTED: tyro ( 531) 321 74.1 6e-13
XP_011542127 (OMIM: 191305,613375) PREDICTED: tyro ( 531) 321 74.1 6e-13
NP_001036236 (OMIM: 153390,615758) tyrosine-protei ( 509) 317 73.3 1e-12
NP_005347 (OMIM: 153390,615758) tyrosine-protein k ( 509) 317 73.3 1e-12
NP_001104567 (OMIM: 165120) tyrosine-protein kinas ( 491) 316 73.1 1.1e-12
XP_016868905 (OMIM: 165120) PREDICTED: tyrosine-pr ( 491) 316 73.1 1.1e-12
XP_016868904 (OMIM: 165120) PREDICTED: tyrosine-pr ( 499) 316 73.1 1.2e-12
NP_002341 (OMIM: 165120) tyrosine-protein kinase L ( 512) 316 73.1 1.2e-12
XP_011515831 (OMIM: 165120) PREDICTED: tyrosine-pr ( 682) 316 73.2 1.5e-12
XP_005266937 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_011533955 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_011533957 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_005266939 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
NP_002022 (OMIM: 606573) tyrosine-protein kinase F ( 505) 313 72.5 1.8e-12
XP_005266938 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_011533956 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_016866134 (OMIM: 606573) PREDICTED: tyrosine-pr ( 505) 313 72.5 1.8e-12
XP_011533958 (OMIM: 606573) PREDICTED: tyrosine-pr ( 392) 307 71.2 3.3e-12
XP_011539315 (OMIM: 164940) PREDICTED: tyrosine-pr ( 352) 304 70.6 4.6e-12
XP_011539314 (OMIM: 164940) PREDICTED: tyrosine-pr ( 410) 304 70.7 5.2e-12
XP_016866144 (OMIM: 137025) PREDICTED: tyrosine-pr ( 311) 302 70.2 5.5e-12
NP_005239 (OMIM: 164940) tyrosine-protein kinase F ( 529) 304 70.7 6.4e-12
XP_006710515 (OMIM: 164940) PREDICTED: tyrosine-pr ( 529) 304 70.7 6.4e-12
NP_001036194 (OMIM: 164940) tyrosine-protein kinas ( 529) 304 70.7 6.4e-12
XP_011539312 (OMIM: 164940) PREDICTED: tyrosine-pr ( 529) 304 70.7 6.4e-12
NP_001036212 (OMIM: 164940) tyrosine-protein kinas ( 529) 304 70.7 6.4e-12
NP_002028 (OMIM: 137025) tyrosine-protein kinase F ( 537) 302 70.3 8.6e-12
>>NP_001039021 (OMIM: 601099) src-like-adapter isoform a (276 aa)
initn: 1870 init1: 1870 opt: 1870 Z-score: 2042.9 bits: 385.8 E(85289): 4.7e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:1-276)
10 20 30 40 50 60
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
190 200 210 220 230 240
250 260 270
pF1KB6 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
::::::::::::::::::::::::::::::::::::
NP_001 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
250 260 270
>>NP_001039022 (OMIM: 601099) src-like-adapter isoform b (293 aa)
initn: 1870 init1: 1870 opt: 1870 Z-score: 2042.5 bits: 385.8 E(85289): 5e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:18-293)
10 20 30 40
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 MLHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
190 200 210 220 230 240
230 240 250 260 270
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
250 260 270 280 290
>>NP_006739 (OMIM: 601099) src-like-adapter isoform c [H (316 aa)
initn: 1870 init1: 1870 opt: 1870 Z-score: 2042.0 bits: 385.8 E(85289): 5.3e-107
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 276 aa overlap (1-276:41-316)
10 20 30
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVL
::::::::::::::::::::::::::::::
NP_006 GGLRARLTFPVCLLYHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 SDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLG
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 RDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 QCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQED
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB6 PEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSS
260 270 280 290 300 310
pF1KB6 PPYFED
::::::
NP_006 PPYFED
>>NP_001269894 (OMIM: 601099) src-like-adapter isoform e (168 aa)
initn: 1120 init1: 1120 opt: 1120 Z-score: 1230.2 bits: 234.7 E(85289): 8.8e-62
Smith-Waterman score: 1120; 100.0% identity (100.0% similar) in 168 aa overlap (109-276:1-168)
80 90 100 110 120 130
pF1KB6 RVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLP
::::::::::::::::::::::::::::::
NP_001 MIRESETKKGFYSLSVRHRQVKHYRIFRLP
10 20 30
140 150 160 170 180 190
pF1KB6 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
100 110 120 130 140 150
260 270
pF1KB6 GGSKRKSSFFSSPPYFED
::::::::::::::::::
NP_001 GGSKRKSSFFSSPPYFED
160
>>XP_016869228 (OMIM: 601099) PREDICTED: src-like-adapte (168 aa)
initn: 1120 init1: 1120 opt: 1120 Z-score: 1230.2 bits: 234.7 E(85289): 8.8e-62
Smith-Waterman score: 1120; 100.0% identity (100.0% similar) in 168 aa overlap (109-276:1-168)
80 90 100 110 120 130
pF1KB6 RVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLP
::::::::::::::::::::::::::::::
XP_016 MIRESETKKGFYSLSVRHRQVKHYRIFRLP
10 20 30
140 150 160 170 180 190
pF1KB6 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKT
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMY
100 110 120 130 140 150
260 270
pF1KB6 GGSKRKSSFFSSPPYFED
::::::::::::::::::
XP_016 GGSKRKSSFFSSPPYFED
160
>>NP_001269893 (OMIM: 601099) src-like-adapter isoform d (249 aa)
initn: 1541 init1: 803 opt: 803 Z-score: 882.7 bits: 171.0 E(85289): 2e-42
Smith-Waterman score: 1457; 84.1% identity (84.1% similar) in 276 aa overlap (1-276:18-249)
10 20 30 40
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 MLHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KVGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
:::::::::::::: ::
NP_001 KVGSFMIRESETKK--------------------------------------------EV
130
170 180 190 200 210 220
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
140 150 160 170 180 190
230 240 250 260 270
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
200 210 220 230 240
>>NP_115590 (OMIM: 606577) src-like-adapter 2 isoform a (261 aa)
initn: 651 init1: 334 opt: 630 Z-score: 694.2 bits: 136.2 E(85289): 6.3e-32
Smith-Waterman score: 630; 42.8% identity (66.9% similar) in 257 aa overlap (6-248:9-259)
10 20 30 40
pF1KB6 MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
:: :.:. . :. :. : :: :...:. . .: :: :
NP_115 MGSLPSRRKSLPSPSLSSSVQGQGPVTM-EAERSKATAVALGSFPAGGPAELSLRLGEPL
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
..:..: :: ..: .::: ::.. ::.: ::::.:::.:.:::::: :: . :.:.
NP_115 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
::::.:..: :::::: . ..:::: : :.: :::::::: :. ::.::::.
NP_115 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSEL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
:: .::.: ::. : .. . :::... ..:. .:. . .: : .::
NP_115 ADDICCLLKEPCVLQRAGPLPGKDIPLPVTVQRTPLNWK---ELDSSLLFSEAATG-EES
180 190 200 210 220 230
230 240 250 260 270
pF1KB6 LFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
:.: :::::.. :.::..: .:.:
NP_115 LLSEGLRESLSFYISLNDE-AVSLDDA
240 250 260
>>XP_016883587 (OMIM: 606577) PREDICTED: src-like-adapte (288 aa)
initn: 491 init1: 334 opt: 475 Z-score: 524.9 bits: 105.0 E(85289): 1.7e-22
Smith-Waterman score: 480; 38.2% identity (59.3% similar) in 285 aa overlap (6-265:9-286)
10 20 30 40
pF1KB6 MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
:: :.:. . :. . :. : :: :...:. . .: :: :
XP_016 MGSLPSRRKSLPSPSLSSSVQGQGPV-TMEAERSKATAVALGSFPAGGPAELSLRLGEPL
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
..:..: :: ..: .::: ::.. ::.: ::::.:::.:.:::::: :: . :.:.
XP_016 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
::::.:..: :::::: . ..:::: : :.: :::::::: :. ::.:::.
XP_016 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSDR
120 130 140 150 160 170
170 180 190 200 210
pF1KB6 A-DGLCCVLTTPCLTQSTAAPAVR--ASSSPVTLRQK--TVDWRRVSRLQEDPEGTENPL
.:: : . : : : : ::: .: .: : . : . .::
XP_016 QKSGL------PYFHASPYAKKCRLGALSSPRALAEKPQTSCVGSGQYLAYHSGSDSEPL
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB6 GVDESLFS-YGLRESIA--SYLSLTSED-NTSFDR--KKKSISLMYGGSKRKSSFFSSPP
.. . : . : : . . : :.: : . ::.: : .:.. :: . ..
XP_016 AAGRVLSTGTGHRAAAVWDSILTLLSTSWCLSFNRHWKMQSLGTASGGREGRALL
240 250 260 270 280
pF1KB6 YFED
>>NP_778252 (OMIM: 606577) src-like-adapter 2 isoform b (210 aa)
initn: 495 init1: 334 opt: 472 Z-score: 523.7 bits: 104.3 E(85289): 2e-22
Smith-Waterman score: 472; 46.8% identity (68.4% similar) in 171 aa overlap (6-162:9-178)
10 20 30 40
pF1KB6 MGNSMKSTPAPA-------ERPLPNPEGLDSDFLAV-LSDYPSPDISPPIFRRGEKL
:: :.:. . :. . :. : :: :...:. . .: :: :
NP_778 MGSLPSRRKSLPSPSLSSSVQGQGPV-TMEAERSKATAVALGSFPAGGPAELSLRLGEPL
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 RVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFM
..:..: :: ..: .::: ::.. ::.: ::::.:::.:.:::::: :: . :.:.
NP_778 TIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 IRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEV
::::.:..: :::::: . ..:::: : :.: :::::::: :. ::.::::
NP_778 IRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSEG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 ADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDES
NP_778 WPAPWQGYTPTCDCAEDTTQLERAGQLPPVF
180 190 200 210
>>XP_011539756 (OMIM: 153390,615758) PREDICTED: tyrosine (516 aa)
initn: 374 init1: 138 opt: 390 Z-score: 428.7 bits: 88.0 E(85289): 3.9e-17
Smith-Waterman score: 398; 35.5% identity (60.6% similar) in 251 aa overlap (9-242:107-354)
10 20 30
pF1KB6 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDY-PSPD
: ::. : : . .... .: .: :: :
XP_011 SLAVGFHLSPTYFLPGLAFLVPHPVTPGFLPIPARFSL-MPLVFTDNLVIALHSYEPSHD
80 90 100 110 120 130
40 50 60 70 80 90
pF1KB6 ISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVY----HGWLFEGLGRDK
. :..::.::.. . : :::: ::.::.:..:: ::.. . :.:..:.:
XP_011 -GDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKD
140 150 160 170 180 190
100 110 120 130 140
pF1KB6 AEELLQLPDTKVGSFMIRESETKKGFYSLSVR---HRQ---VKHYRIFRLPNNWYYISPR
::. : : . :::.:::::. : .::::: . : ::::.: : :. .:::::
XP_011 AERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPR
200 210 220 230 240 250
150 160 170 180 190 200
pF1KB6 LTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAP-AVRASSSPVTLRQKTVDWRRVSR
.:: :..:: ::.. .: : .. : :.. .: : : .. . :. : .
XP_011 ITFPGLHELVRHYTRYYNGHTKV-AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV
260 270 280 290 300 310
210 220 230 240 250 260
pF1KB6 LQEDP-----EGTENPLGVDESLFSYGLRESIASYLSLTSEDNTSFDRKKKSISLMYGGS
. ..: : :: :: :.. .: . :.....
XP_011 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR
320 330 340 350 360 370
270
pF1KB6 KRKSSFFSSPPYFED
XP_011 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF
380 390 400 410 420 430
276 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:47:26 2016 done: Fri Nov 4 20:47:27 2016
Total Scan time: 7.850 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]