Result of FASTA (omim) for
pF1KB6413
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6413, 308 aa
1>>>pF1KB6413 308 - 308 aa - 308 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5919+/-0.000392; mu= 14.1034+/- 0.024
mean_var=74.3192+/-15.006, 0's: 0 Z-trim(113.4): 133 B-trim: 1179 in 1/49
Lambda= 0.148773
statistics sampled from 22545 (22684) to 22545 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.266), width: 16
Scan time: 7.860
The best scores are: opt bits E(85289)
NP_056442 (OMIM: 603813,605747) low density lipopr ( 308) 2004 439.5 4e-123
XP_011539511 (OMIM: 603813,605747) PREDICTED: low ( 307) 1986 435.6 5.9e-122
XP_016856483 (OMIM: 603813,605747) PREDICTED: low ( 281) 1802 396.1 4.2e-110
XP_006710624 (OMIM: 603813,605747) PREDICTED: low ( 264) 1677 369.3 4.8e-102
XP_006710623 (OMIM: 603813,605747) PREDICTED: low ( 270) 1677 369.3 4.9e-102
XP_006710622 (OMIM: 603813,605747) PREDICTED: low ( 278) 1677 369.3 5e-102
XP_011539514 (OMIM: 603813,605747) PREDICTED: low ( 263) 1659 365.4 6.9e-101
XP_011539513 (OMIM: 603813,605747) PREDICTED: low ( 269) 1659 365.4 7e-101
XP_011539512 (OMIM: 603813,605747) PREDICTED: low ( 277) 1659 365.4 7.2e-101
XP_016856484 (OMIM: 603813,605747) PREDICTED: low ( 155) 990 221.7 7.5e-58
NP_001239597 (OMIM: 608165) PTB domain-containing ( 291) 292 72.0 1.6e-12
NP_057399 (OMIM: 608165) PTB domain-containing eng ( 304) 292 72.0 1.6e-12
XP_016859795 (OMIM: 608165) PREDICTED: PTB domain- ( 304) 292 72.0 1.6e-12
XP_006712652 (OMIM: 608165) PREDICTED: PTB domain- ( 322) 292 72.1 1.7e-12
XP_016859794 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 290 71.7 2.6e-12
XP_016859793 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 290 71.7 2.6e-12
XP_016859792 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 290 71.7 2.6e-12
XP_011509631 (OMIM: 608165) PREDICTED: PTB domain- ( 376) 290 71.7 2.6e-12
XP_006712646 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_006712647 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_006712645 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_006712644 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_006712648 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_006712643 (OMIM: 608165) PREDICTED: PTB domain- ( 379) 290 71.7 2.7e-12
XP_011509634 (OMIM: 608165) PREDICTED: PTB domain- ( 351) 264 66.1 1.2e-10
XP_011509633 (OMIM: 608165) PREDICTED: PTB domain- ( 366) 260 65.2 2.2e-10
NP_001005745 (OMIM: 603728) protein numb homolog i ( 592) 252 63.6 1.1e-09
NP_003735 (OMIM: 603728) protein numb homolog isof ( 640) 252 63.6 1.2e-09
NP_001307043 (OMIM: 603728) protein numb homolog i ( 603) 239 60.8 7.7e-09
NP_001005744 (OMIM: 603728) protein numb homolog i ( 603) 239 60.8 7.7e-09
NP_001005743 (OMIM: 603728) protein numb homolog i ( 651) 239 60.9 8.2e-09
NP_001276908 (OMIM: 604018) numb-like protein isof ( 568) 236 60.2 1.1e-08
NP_001276909 (OMIM: 604018) numb-like protein isof ( 568) 236 60.2 1.1e-08
NP_004747 (OMIM: 604018) numb-like protein isoform ( 609) 236 60.2 1.2e-08
NP_001191010 (OMIM: 607815) ankyrin repeat and ste ( 254) 198 51.8 1.7e-06
XP_005269089 (OMIM: 607815) PREDICTED: ankyrin rep ( 266) 198 51.8 1.7e-06
NP_001191009 (OMIM: 607815) ankyrin repeat and ste ( 266) 198 51.8 1.7e-06
NP_066566 (OMIM: 603448) disabled homolog 1 [Homo ( 555) 202 52.9 1.8e-06
NP_001191008 (OMIM: 607815) ankyrin repeat and ste ( 290) 198 51.9 1.9e-06
NP_001190994 (OMIM: 607815) ankyrin repeat and ste ( 290) 198 51.9 1.9e-06
NP_001190995 (OMIM: 607815) ankyrin repeat and ste ( 357) 198 51.9 2.2e-06
NP_001190996 (OMIM: 607815) ankyrin repeat and ste ( 394) 198 51.9 2.4e-06
NP_064525 (OMIM: 607815) ankyrin repeat and steril ( 414) 198 51.9 2.5e-06
XP_016875154 (OMIM: 607815) PREDICTED: ankyrin rep ( 425) 198 51.9 2.6e-06
NP_001190999 (OMIM: 607815) ankyrin repeat and ste ( 426) 198 51.9 2.6e-06
XP_016875153 (OMIM: 607815) PREDICTED: ankyrin rep ( 429) 198 52.0 2.6e-06
NP_001190998 (OMIM: 607815) ankyrin repeat and ste ( 450) 198 52.0 2.7e-06
NP_001190997 (OMIM: 607815) ankyrin repeat and ste ( 460) 198 52.0 2.7e-06
XP_016875152 (OMIM: 607815) PREDICTED: ankyrin rep ( 476) 198 52.0 2.8e-06
XP_016875151 (OMIM: 607815) PREDICTED: ankyrin rep ( 479) 198 52.0 2.8e-06
>>NP_056442 (OMIM: 603813,605747) low density lipoprotei (308 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 2331.4 bits: 439.5 E(85289): 4e-123
Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
250 260 270 280 290 300
pF1KB6 EQDDLFSF
::::::::
NP_056 EQDDLFSF
>>XP_011539511 (OMIM: 603813,605747) PREDICTED: low dens (307 aa)
initn: 1984 init1: 1598 opt: 1986 Z-score: 2310.5 bits: 435.6 E(85289): 5.9e-122
Smith-Waterman score: 1986; 99.7% identity (99.7% similar) in 308 aa overlap (1-308:1-307)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSGSSVVW-LDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
250 260 270 280 290
pF1KB6 EQDDLFSF
::::::::
XP_011 EQDDLFSF
300
>>XP_016856483 (OMIM: 603813,605747) PREDICTED: low dens (281 aa)
initn: 1802 init1: 1802 opt: 1802 Z-score: 2097.7 bits: 396.1 E(85289): 4.2e-110
Smith-Waterman score: 1802; 99.6% identity (100.0% similar) in 279 aa overlap (30-308:3-281)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
.::::::::::::::::::::::::::::::
XP_016 MAELPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
220 230 240 250 260 270
pF1KB6 EQDDLFSF
::::::::
XP_016 EQDDLFSF
280
>>XP_006710624 (OMIM: 603813,605747) PREDICTED: low dens (264 aa)
initn: 1677 init1: 1677 opt: 1677 Z-score: 1953.1 bits: 369.3 E(85289): 4.8e-102
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
:::::::::::::::::::::
XP_006 ALSGSSVVWELDDGLDEAFSRDPD
250 260
>>XP_006710623 (OMIM: 603813,605747) PREDICTED: low dens (270 aa)
initn: 1677 init1: 1677 opt: 1677 Z-score: 1952.9 bits: 369.3 E(85289): 4.9e-102
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
:::::::::::::::::::::
XP_006 ALSGSSVVWELDDGLDEAFSRWRFTSCSER
250 260 270
>>XP_006710622 (OMIM: 603813,605747) PREDICTED: low dens (278 aa)
initn: 1677 init1: 1677 opt: 1677 Z-score: 1952.7 bits: 369.3 E(85289): 5e-102
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
:::::::::::::::::::::
XP_006 ALSGSSVVWELDDGLDEAFSRGRELTGEETPSSVVQSC
250 260 270
>>XP_011539514 (OMIM: 603813,605747) PREDICTED: low dens (263 aa)
initn: 1657 init1: 1598 opt: 1659 Z-score: 1932.2 bits: 365.4 E(85289): 6.9e-101
Smith-Waterman score: 1659; 99.6% identity (99.6% similar) in 261 aa overlap (1-261:1-260)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::: :::::::::::
XP_011 ALSGSSVVW-LDDGLDEAFSRDPD
250 260
>>XP_011539513 (OMIM: 603813,605747) PREDICTED: low dens (269 aa)
initn: 1657 init1: 1598 opt: 1659 Z-score: 1932.1 bits: 365.4 E(85289): 7e-101
Smith-Waterman score: 1659; 99.6% identity (99.6% similar) in 261 aa overlap (1-261:1-260)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::: :::::::::::
XP_011 ALSGSSVVW-LDDGLDEAFSRWRFTSCSER
250 260
>>XP_011539512 (OMIM: 603813,605747) PREDICTED: low dens (277 aa)
initn: 1657 init1: 1598 opt: 1659 Z-score: 1931.9 bits: 365.4 E(85289): 7.2e-101
Smith-Waterman score: 1659; 99.6% identity (99.6% similar) in 261 aa overlap (1-261:1-260)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ALSGSSVVWELDDGLDEAFSRLAQSRTNPQVLDTGLTAQDMHYAQCLSPVDWDKPDSSGT
::::::::: :::::::::::
XP_011 ALSGSSVVW-LDDGLDEAFSRGRELTGEETPSSVVQSC
250 260 270
>>XP_016856484 (OMIM: 603813,605747) PREDICTED: low dens (155 aa)
initn: 990 init1: 990 opt: 990 Z-score: 1159.6 bits: 221.7 E(85289): 7.5e-58
Smith-Waterman score: 990; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153)
10 20 30 40 50 60
pF1KB6 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDALKSAGRALIRSPSLAKQSWGGGGRHRKLPENWTDTRETLLEGMLFSLKYLGMTLVEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKGEELSAAAIKRIVATAKASGKKLQKVTLKVSPRGIILTDNLTNQLIENVSIYRISYCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEFWQVSKEEKE
:::::::::::::::::::::::::::::::::
XP_016 ADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMRS
130 140 150
190 200 210 220 230 240
pF1KB6 KRDKASQEGGDVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVSANTTNMDEVPRPQ
308 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:52:43 2016 done: Fri Nov 4 17:52:44 2016
Total Scan time: 7.860 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]