Result of FASTA (omim) for
pF1KB6423
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6423, 309 aa
1>>>pF1KB6423 309 - 309 aa - 309 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7618+/-0.000335; mu= 18.3225+/- 0.021
mean_var=61.2600+/-12.694, 0's: 0 Z-trim(115.0): 76 B-trim: 0 in 0/50
Lambda= 0.163865
statistics sampled from 25122 (25200) to 25122 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.295), width: 16
Scan time: 8.150
The best scores are: opt bits E(85289)
NP_055394 (OMIM: 612166) zinc transporter ZIP2 iso ( 309) 2045 491.8 7.3e-139
NP_001243517 (OMIM: 612166) zinc transporter ZIP2 ( 85) 552 138.4 4.8e-33
NP_001258887 (OMIM: 604740) zinc transporter ZIP1 ( 324) 487 123.5 5.7e-28
NP_001258886 (OMIM: 604740) zinc transporter ZIP1 ( 324) 487 123.5 5.7e-28
NP_001258889 (OMIM: 604740) zinc transporter ZIP1 ( 324) 487 123.5 5.7e-28
NP_001258888 (OMIM: 604740) zinc transporter ZIP1 ( 324) 487 123.5 5.7e-28
NP_055252 (OMIM: 604740) zinc transporter ZIP1 iso ( 324) 487 123.5 5.7e-28
NP_653165 (OMIM: 612168) zinc transporter ZIP3 iso ( 314) 355 92.3 1.4e-18
XP_016874676 (OMIM: 608730,615946) PREDICTED: zinc ( 288) 187 52.5 1.2e-06
XP_016874675 (OMIM: 608730,615946) PREDICTED: zinc ( 288) 187 52.5 1.2e-06
XP_005268860 (OMIM: 608730,615946) PREDICTED: zinc ( 540) 187 52.7 1.9e-06
XP_011536500 (OMIM: 608730,615946) PREDICTED: zinc ( 540) 187 52.7 1.9e-06
XP_011536502 (OMIM: 608730,615946) PREDICTED: zinc ( 540) 187 52.7 1.9e-06
XP_011536501 (OMIM: 608730,615946) PREDICTED: zinc ( 540) 187 52.7 1.9e-06
NP_775867 (OMIM: 608730,615946) zinc transporter Z ( 540) 187 52.7 1.9e-06
XP_011536503 (OMIM: 608730,615946) PREDICTED: zinc ( 540) 187 52.7 1.9e-06
NP_001128667 (OMIM: 608730,615946) zinc transporte ( 540) 187 52.7 1.9e-06
XP_016879822 (OMIM: 616508) PREDICTED: zinc transp ( 292) 182 51.4 2.7e-06
XP_016879826 (OMIM: 616508) PREDICTED: zinc transp ( 292) 182 51.4 2.7e-06
XP_016879825 (OMIM: 616508) PREDICTED: zinc transp ( 292) 182 51.4 2.7e-06
XP_011522796 (OMIM: 616508) PREDICTED: zinc transp ( 342) 182 51.4 3e-06
XP_006721818 (OMIM: 616508) PREDICTED: zinc transp ( 342) 182 51.4 3e-06
XP_011522795 (OMIM: 616508) PREDICTED: zinc transp ( 342) 182 51.4 3e-06
XP_006721817 (OMIM: 616508) PREDICTED: zinc transp ( 342) 182 51.4 3e-06
NP_001153242 (OMIM: 616508) zinc transporter ZIP11 ( 342) 182 51.4 3e-06
XP_016879819 (OMIM: 616508) PREDICTED: zinc transp ( 335) 168 48.1 2.9e-05
XP_016879821 (OMIM: 616508) PREDICTED: zinc transp ( 335) 168 48.1 2.9e-05
NP_631916 (OMIM: 616508) zinc transporter ZIP11 is ( 335) 168 48.1 2.9e-05
XP_016879820 (OMIM: 616508) PREDICTED: zinc transp ( 335) 168 48.1 2.9e-05
XP_005257191 (OMIM: 616508) PREDICTED: zinc transp ( 335) 168 48.1 2.9e-05
XP_005246746 (OMIM: 608733) PREDICTED: zinc transp ( 831) 160 46.5 0.00022
XP_011509808 (OMIM: 608733) PREDICTED: zinc transp ( 831) 160 46.5 0.00022
NP_065075 (OMIM: 608733) zinc transporter ZIP10 pr ( 831) 160 46.5 0.00022
NP_001120729 (OMIM: 608733) zinc transporter ZIP10 ( 831) 160 46.5 0.00022
XP_011509807 (OMIM: 608733) PREDICTED: zinc transp ( 831) 160 46.5 0.00022
XP_011509806 (OMIM: 608733) PREDICTED: zinc transp ( 831) 160 46.5 0.00022
NP_060237 (OMIM: 201100,607059) zinc transporter Z ( 622) 156 45.5 0.00034
NP_570901 (OMIM: 201100,607059) zinc transporter Z ( 647) 156 45.5 0.00035
NP_001269663 (OMIM: 608734) zinc transporter ZIP12 ( 557) 150 44.0 0.00084
NP_001267486 (OMIM: 201100,607059) zinc transporte ( 149) 143 41.9 0.00094
NP_689938 (OMIM: 608734) zinc transporter ZIP12 is ( 654) 150 44.0 0.00095
NP_001269662 (OMIM: 608734) zinc transporter ZIP12 ( 690) 150 44.1 0.00099
NP_001138667 (OMIM: 608734) zinc transporter ZIP12 ( 691) 150 44.1 0.00099
XP_016874030 (OMIM: 608735,612350) PREDICTED: zinc ( 328) 145 42.6 0.0013
XP_006718446 (OMIM: 608735,612350) PREDICTED: zinc ( 343) 145 42.7 0.0013
NP_001128619 (OMIM: 608732,616721) zinc transporte ( 444) 141 41.8 0.0031
XP_016864031 (OMIM: 608732,616721) PREDICTED: zinc ( 475) 141 41.8 0.0032
XP_011524203 (OMIM: 608731) PREDICTED: zinc transp ( 755) 140 41.7 0.0055
NP_036451 (OMIM: 608731) zinc transporter ZIP6 iso ( 755) 140 41.7 0.0055
XP_011524202 (OMIM: 608731) PREDICTED: zinc transp ( 755) 140 41.7 0.0055
>>NP_055394 (OMIM: 612166) zinc transporter ZIP2 isoform (309 aa)
initn: 2045 init1: 2045 opt: 2045 Z-score: 2614.0 bits: 491.8 E(85289): 7.3e-139
Smith-Waterman score: 2045; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHHRLVLRLLGCISAGVFLGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHHRLVLRLLGCISAGVFLGAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SLALQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SLALQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFEG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSILLLALMSPLGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSILLLALMSPLGLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 VGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLEILPRELASPEAPLAKWSCVAAGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLEILPRELASPEAPLAKWSCVAAGFA
250 260 270 280 290 300
pF1KB6 FMAFIALWA
:::::::::
NP_055 FMAFIALWA
>>NP_001243517 (OMIM: 612166) zinc transporter ZIP2 isof (85 aa)
initn: 552 init1: 552 opt: 552 Z-score: 714.3 bits: 138.4 E(85289): 4.8e-33
Smith-Waterman score: 552; 100.0% identity (100.0% similar) in 82 aa overlap (1-82:1-82)
10 20 30 40 50 60
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHHRLVLRLLGCISAGVFLGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHHRLVLRLLGCISAGVFLGAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFLE
::::::::::::::::::::::
NP_001 FMHMTAEALEEIESQIQKFMVQISK
70 80
>>NP_001258887 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 500 init1: 228 opt: 487 Z-score: 623.1 bits: 123.5 E(85289): 5.7e-28
Smith-Waterman score: 536; 36.5% identity (63.9% similar) in 310 aa overlap (5-302:27-316)
10 20 30
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAAR
: .::: : ::.::: :.:.::: .
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 GH--HRLVLRLLGCISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDAD
: .. .: :..:...::::.. .. . . : :. . . :
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVT--------------
70 80 90 100
100 110 120 130 140 150
pF1KB6 SAHMEYPYGELIISLGFFFVFFLESLALQCCPGAAGGSTVQDEE--WGGAHIFELHSHGH
...: :.:...:::.:. .:...: .: : ... . : .. : :
NP_001 ---LQFPLQEFILAMGFFLVLVMEQITLAY-KEQSGPSPLEETRALLGTVNGGPQHWHDG
110 120 130 140 150 160
160 170 180 190 200
pF1KB6 --LPSPSKGP-----LRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVV
.:. : .: ::: ::..::..:::::::::::: : ...::::.: :::...
NP_001 PGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILA
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB6 FGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGG-RGLAQAVLEGVAA
....::.. .. .. .:.. :.:::...: :. ..: : . :::.::::.::
NP_001 VSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAAL--AESAGPLHQLAQSVLEGMAA
230 240 250 260 270 280
270 280 290 300
pF1KB6 GTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:::::.:::::::.:::: : . : . ::::..
NP_001 GTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258886 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 500 init1: 228 opt: 487 Z-score: 623.1 bits: 123.5 E(85289): 5.7e-28
Smith-Waterman score: 536; 36.5% identity (63.9% similar) in 310 aa overlap (5-302:27-316)
10 20 30
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAAR
: .::: : ::.::: :.:.::: .
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 GH--HRLVLRLLGCISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDAD
: .. .: :..:...::::.. .. . . : :. . . :
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVT--------------
70 80 90 100
100 110 120 130 140 150
pF1KB6 SAHMEYPYGELIISLGFFFVFFLESLALQCCPGAAGGSTVQDEE--WGGAHIFELHSHGH
...: :.:...:::.:. .:...: .: : ... . : .. : :
NP_001 ---LQFPLQEFILAMGFFLVLVMEQITLAY-KEQSGPSPLEETRALLGTVNGGPQHWHDG
110 120 130 140 150 160
160 170 180 190 200
pF1KB6 --LPSPSKGP-----LRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVV
.:. : .: ::: ::..::..:::::::::::: : ...::::.: :::...
NP_001 PGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILA
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB6 FGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGG-RGLAQAVLEGVAA
....::.. .. .. .:.. :.:::...: :. ..: : . :::.::::.::
NP_001 VSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAAL--AESAGPLHQLAQSVLEGMAA
230 240 250 260 270 280
270 280 290 300
pF1KB6 GTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:::::.:::::::.:::: : . : . ::::..
NP_001 GTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258889 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 500 init1: 228 opt: 487 Z-score: 623.1 bits: 123.5 E(85289): 5.7e-28
Smith-Waterman score: 536; 36.5% identity (63.9% similar) in 310 aa overlap (5-302:27-316)
10 20 30
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAAR
: .::: : ::.::: :.:.::: .
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 GH--HRLVLRLLGCISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDAD
: .. .: :..:...::::.. .. . . : :. . . :
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVT--------------
70 80 90 100
100 110 120 130 140 150
pF1KB6 SAHMEYPYGELIISLGFFFVFFLESLALQCCPGAAGGSTVQDEE--WGGAHIFELHSHGH
...: :.:...:::.:. .:...: .: : ... . : .. : :
NP_001 ---LQFPLQEFILAMGFFLVLVMEQITLAY-KEQSGPSPLEETRALLGTVNGGPQHWHDG
110 120 130 140 150 160
160 170 180 190 200
pF1KB6 --LPSPSKGP-----LRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVV
.:. : .: ::: ::..::..:::::::::::: : ...::::.: :::...
NP_001 PGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILA
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB6 FGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGG-RGLAQAVLEGVAA
....::.. .. .. .:.. :.:::...: :. ..: : . :::.::::.::
NP_001 VSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAAL--AESAGPLHQLAQSVLEGMAA
230 240 250 260 270 280
270 280 290 300
pF1KB6 GTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:::::.:::::::.:::: : . : . ::::..
NP_001 GTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258888 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 500 init1: 228 opt: 487 Z-score: 623.1 bits: 123.5 E(85289): 5.7e-28
Smith-Waterman score: 536; 36.5% identity (63.9% similar) in 310 aa overlap (5-302:27-316)
10 20 30
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAAR
: .::: : ::.::: :.:.::: .
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 GH--HRLVLRLLGCISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDAD
: .. .: :..:...::::.. .. . . : :. . . :
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVT--------------
70 80 90 100
100 110 120 130 140 150
pF1KB6 SAHMEYPYGELIISLGFFFVFFLESLALQCCPGAAGGSTVQDEE--WGGAHIFELHSHGH
...: :.:...:::.:. .:...: .: : ... . : .. : :
NP_001 ---LQFPLQEFILAMGFFLVLVMEQITLAY-KEQSGPSPLEETRALLGTVNGGPQHWHDG
110 120 130 140 150 160
160 170 180 190 200
pF1KB6 --LPSPSKGP-----LRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVV
.:. : .: ::: ::..::..:::::::::::: : ...::::.: :::...
NP_001 PGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILA
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB6 FGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGG-RGLAQAVLEGVAA
....::.. .. .. .:.. :.:::...: :. ..: : . :::.::::.::
NP_001 VSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAAL--AESAGPLHQLAQSVLEGMAA
230 240 250 260 270 280
270 280 290 300
pF1KB6 GTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:::::.:::::::.:::: : . : . ::::..
NP_001 GTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_055252 (OMIM: 604740) zinc transporter ZIP1 isoform (324 aa)
initn: 500 init1: 228 opt: 487 Z-score: 623.1 bits: 123.5 E(85289): 5.7e-28
Smith-Waterman score: 536; 36.5% identity (63.9% similar) in 310 aa overlap (5-302:27-316)
10 20 30
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAAR
: .::: : ::.::: :.:.::: .
NP_055 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 GH--HRLVLRLLGCISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDAD
: .. .: :..:...::::.. .. . . : :. . . :
NP_055 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVT--------------
70 80 90 100
100 110 120 130 140 150
pF1KB6 SAHMEYPYGELIISLGFFFVFFLESLALQCCPGAAGGSTVQDEE--WGGAHIFELHSHGH
...: :.:...:::.:. .:...: .: : ... . : .. : :
NP_055 ---LQFPLQEFILAMGFFLVLVMEQITLAY-KEQSGPSPLEETRALLGTVNGGPQHWHDG
110 120 130 140 150 160
160 170 180 190 200
pF1KB6 --LPSPSKGP-----LRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVV
.:. : .: ::: ::..::..:::::::::::: : ...::::.: :::...
NP_055 PGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILA
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB6 FGVGMRLVHLGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGG-RGLAQAVLEGVAA
....::.. .. .. .:.. :.:::...: :. ..: : . :::.::::.::
NP_055 VSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAAL--AESAGPLHQLAQSVLEGMAA
230 240 250 260 270 280
270 280 290 300
pF1KB6 GTFLYVTFLEILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:::::.:::::::.:::: : . : . ::::..
NP_055 GTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_653165 (OMIM: 612168) zinc transporter ZIP3 isoform (314 aa)
initn: 352 init1: 153 opt: 355 Z-score: 454.7 bits: 92.3 E(85289): 1.4e-18
Smith-Waterman score: 423; 32.1% identity (60.9% similar) in 327 aa overlap (1-303:1-307)
10 20 30 40 50
pF1KB6 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHH-RLVLRLLGCISAGVFLGA
: .:: :. :. ... . : .: :. : .. : ..:. . .: : . ...::::..
NP_653 MVKLLVAKILCMVGVFFFMLLGSLLPV--KIIETDFEKAHRSKKILSLCNTFGGGVFLAT
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 GFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFL
: . : .. ..:: . : : .. .:: .: :. ::::.. ::
NP_653 CFNAL----LPAVREKLQKVL----------SLGHIST---DYPLAETILLLGFFMTVFL
60 70 80 90 100
120 130 140 150 160
pF1KB6 ESLAL---QCCPG-------AAGGSTVQDEEW-----GGA--HIFELHSHGHLPSPS-KG
:.: : . :. ::... .: :. ::: : . .. ::: :: : .:
NP_653 EQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQG
110 120 130 140 150 160
170 180 190 200 210
pF1KB6 -----PLRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVH
:.: : : ..:: ::::::::.::: .:.: ..: .:. ::. ..:. ...
NP_653 LSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMAR
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB6 LGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLE
. : :. . .. : :::...::.. .... : ..:...:.:.:.::::..::::
NP_653 SAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPG-SVASVLLQGLAGGTFLFITFLE
230 240 250 260 270 280
280 290 300
pF1KB6 ILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
:: .:: : : .. :.. .:
NP_653 ILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
290 300 310
>>XP_016874676 (OMIM: 608730,615946) PREDICTED: zinc tra (288 aa)
initn: 166 init1: 94 opt: 187 Z-score: 240.6 bits: 52.5 E(85289): 1.2e-06
Smith-Waterman score: 187; 34.0% identity (60.9% similar) in 156 aa overlap (150-302:121-265)
120 130 140 150 160 170
pF1KB6 ESLALQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFE
::::: . : . ..::. ..:.. .
XP_016 LQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGH----QGGTDITWMVLLGDGLHNLTD
100 110 120 130 140
180 190 200 210 220 230
pF1KB6 GLAVG--LQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSILLLALMSPL
:::.: .. .. .. :::. :. .: :.. : : : .:::.:.:
XP_016 GLAIGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQSGLSFR----RLLLLSLVSG-
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB6 GLAVGLAVTG-GDSEGGRGLAQAVLEGVAAGTFLYVTFLEILPRELASPEAPLAKWSCVA
.:..: :: : : : : :. :. ::.::.::::.....:: : :: :: .
XP_016 ALGLGGAVLGVGLSLGPVPLTPWVF-GVTAGVFLYVALVDMLPALLRPPE-PLPTPHVLL
210 220 230 240 250
300
pF1KB6 AGFAFMAFIALWA
:....
XP_016 QGLGLLLGGGLMLAITLLEERLLPVTTEG
260 270 280
>>XP_016874675 (OMIM: 608730,615946) PREDICTED: zinc tra (288 aa)
initn: 166 init1: 94 opt: 187 Z-score: 240.6 bits: 52.5 E(85289): 1.2e-06
Smith-Waterman score: 187; 34.0% identity (60.9% similar) in 156 aa overlap (150-302:121-265)
120 130 140 150 160 170
pF1KB6 ESLALQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFE
::::: . : . ..::. ..:.. .
XP_016 LQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGH----QGGTDITWMVLLGDGLHNLTD
100 110 120 130 140
180 190 200 210 220 230
pF1KB6 GLAVG--LQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSILLLALMSPL
:::.: .. .. .. :::. :. .: :.. : : : .:::.:.:
XP_016 GLAIGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQSGLSFR----RLLLLSLVSG-
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB6 GLAVGLAVTG-GDSEGGRGLAQAVLEGVAAGTFLYVTFLEILPRELASPEAPLAKWSCVA
.:..: :: : : : : :. :. ::.::.::::.....:: : :: :: .
XP_016 ALGLGGAVLGVGLSLGPVPLTPWVF-GVTAGVFLYVALVDMLPALLRPPE-PLPTPHVLL
210 220 230 240 250
300
pF1KB6 AGFAFMAFIALWA
:....
XP_016 QGLGLLLGGGLMLAITLLEERLLPVTTEG
260 270 280
309 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:11:56 2016 done: Sat Nov 5 18:11:57 2016
Total Scan time: 8.150 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]