Result of FASTA (omim) for
pF1KB6424
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6424, 340 aa
1>>>pF1KB6424 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1491+/-0.000498; mu= 12.3246+/- 0.030
mean_var=149.1961+/-30.258, 0's: 0 Z-trim(111.9): 433 B-trim: 102 in 1/51
Lambda= 0.105002
statistics sampled from 20099 (20676) to 20099 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.242), width: 16
Scan time: 7.690
The best scores are: opt bits E(85289)
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2321 364.0 2.6e-100
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 2321 364.0 2.6e-100
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2321 364.0 2.6e-100
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 2152 338.4 1.3e-92
NP_001269468 (OMIM: 139380,613065,616973) guanine ( 340) 2152 338.4 1.3e-92
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 2151 338.2 1.5e-92
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 1960 309.3 7.6e-84
NP_001284500 (OMIM: 139130,145500,617024) guanine ( 339) 1935 305.5 1.1e-82
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 1739 275.9 9.5e-74
NP_001269467 (OMIM: 139380,613065,616973) guanine ( 240) 1553 247.5 2.2e-65
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1259 203.1 7.2e-52
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1259 203.2 7.8e-52
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1203 194.7 2.6e-49
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1183 191.5 1.9e-48
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212) 817 135.9 7.5e-32
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521) 421 76.4 1.5e-13
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522) 421 76.4 1.5e-13
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 401 73.1 9.3e-13
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 401 73.1 9.3e-13
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 401 73.1 9.3e-13
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 391 71.5 2.4e-12
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 391 71.5 2.4e-12
NP_008882 (OMIM: 601787) transcription initiation ( 800) 387 71.5 7.1e-12
NP_006089 (OMIM: 176981) receptor of activated pro ( 317) 344 64.5 3.6e-10
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 336 63.4 1e-09
NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 329 62.3 1.9e-09
NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 329 62.3 2e-09
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540) 329 62.5 2.4e-09
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 326 61.8 2.6e-09
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589) 329 62.5 2.6e-09
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627) 329 62.6 2.7e-09
XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679) 329 62.6 2.8e-09
XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679) 329 62.6 2.8e-09
XP_011530385 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 329 62.6 2.9e-09
XP_011530387 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 329 62.6 2.9e-09
XP_011530386 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 329 62.6 2.9e-09
XP_016863851 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 329 62.6 2.9e-09
NP_361014 (OMIM: 606278) F-box/WD repeat-containin ( 707) 329 62.6 2.9e-09
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 328 62.4 3.1e-09
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 328 62.4 3.1e-09
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 328 62.4 3.1e-09
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 328 62.4 3.1e-09
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 328 62.4 3.1e-09
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 328 62.4 3.1e-09
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 328 62.4 3.1e-09
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 328 62.4 3.1e-09
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 328 62.4 3.1e-09
>>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2321 init1: 2321 opt: 2321 Z-score: 1921.8 bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
::::::::::::::::::::::::::::::::::::::::
XP_006 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin (340 aa)
initn: 2321 init1: 2321 opt: 2321 Z-score: 1921.8 bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
::::::::::::::::::::::::::::::::::::::::
NP_067 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2321 init1: 2321 opt: 2321 Z-score: 1921.8 bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
::::::::::::::::::::::::::::::::::::::::
XP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1783.4 bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1783.4 bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1783.4 bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_002 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_002 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_002 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_002 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_002 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:.::::::::::::::::::::::::::::::::::.:::
NP_002 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_001269468 (OMIM: 139380,613065,616973) guanine nucl (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1783.4 bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_001 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_001 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_001 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_001 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_001 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:.::::::::::::::::::::::::::::::::::.:::
NP_001 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1783.4 bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
:::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_005264 (OMIM: 139390) guanine nucleotide-binding pr (340 aa)
initn: 2151 init1: 2151 opt: 2151 Z-score: 1782.6 bits: 338.2 E(85289): 1.5e-92
Smith-Waterman score: 2151; 90.0% identity (97.9% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::.::::::.:.::.:::...: :::::::::::::::::::::
NP_005 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::.:::::::::
NP_005 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
::::.:::::::::::::::::::::::::::::.::.:::::::::::::::.:::. :
NP_005 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
.:::::::::::.:: ::::::::::: ::::.::.::::.: :: ::::::.:::::::
NP_005 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
:.::::::::::::::::::::.::::::::::::::::.:::::::::::::::.::..
NP_005 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
::::::::::::::::::::::::::::::::::::.:::
NP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot (340 aa)
initn: 1960 init1: 1960 opt: 1960 Z-score: 1626.3 bits: 309.3 E(85289): 7.6e-84
Smith-Waterman score: 1960; 79.7% identity (95.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
:.:.::::::::::..:: :::::: :.::....:... :::.:::::::::::::::::
NP_002 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
:::. ::.::::::::::::.::::::::.::::::::::::::::::::.::::::::.
NP_002 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
:::::::.:::::.::::: .:::::::::::::..:::::::::::::::::.:: :.:
NP_002 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
.::.:: :::..:::. :.:::::::.::::.:.: :::.:::: :::::. ::::: :
NP_002 VGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
. ::::::.::::::::::::. .::..::::::::::: :::::.::::::::::::..
NP_002 ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM
250 260 270 280 290 300
310 320 330 340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
:..:.:.:.:::::::::::: ::::::::::::::.:::
NP_002 KSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
310 320 330 340
340 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:06:06 2016 done: Sat Nov 5 20:06:08 2016
Total Scan time: 7.690 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]