FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6431, 312 aa 1>>>pF1KB6431 312 - 312 aa - 312 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0976+/-0.000689; mu= 13.1471+/- 0.042 mean_var=87.2485+/-16.926, 0's: 0 Z-trim(112.1): 12 B-trim: 0 in 0/52 Lambda= 0.137308 statistics sampled from 12919 (12930) to 12919 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.397), width: 16 Scan time: 2.450 The best scores are: opt bits E(32554) CCDS10457.1 NTHL1 gene_id:4913|Hs108|chr16 ( 312) 2126 430.3 9e-121 >>CCDS10457.1 NTHL1 gene_id:4913|Hs108|chr16 (312 aa) initn: 2126 init1: 2126 opt: 2126 Z-score: 2281.7 bits: 430.3 E(32554): 9e-121 Smith-Waterman score: 2126; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312) 10 20 30 40 50 60 pF1KB6 MCSPQESGMTALSARMLTRSRSLGPGAGPRGCREEPGPLRRREAAAEARKSHSPVKRPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MCSPQESGMTALSARMLTRSRSLGPGAGPRGCREEPGPLRRREAAAEARKSHSPVKRPRK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 AQRLRVAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AQRLRVAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 FWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 FWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 HVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHAC 250 260 270 280 290 300 310 pF1KB6 LNQALCPAAQGL :::::::::::: CCDS10 LNQALCPAAQGL 310 312 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 17:37:23 2016 done: Fri Nov 4 17:37:24 2016 Total Scan time: 2.450 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]