Result of FASTA (ccds) for pF1KB6450
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6450, 349 aa
  1>>>pF1KB6450     349 - 349 aa - 349 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.9976+/-0.000874; mu= 2.6970+/- 0.053
 mean_var=275.0247+/-55.514, 0's: 0 Z-trim(115.7): 22  B-trim: 0 in 0/53
 Lambda= 0.077337
 statistics sampled from 16460 (16475) to 16460 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.493), width:  16
 Scan time:  1.510

The best scores are:                                      opt bits E(33420)
CCDS4963.1 KHDRBS2 gene_id:202559|Hs109|chr6       ( 349) 2353 275.1 6.2e-74
CCDS6374.1 KHDRBS3 gene_id:10656|Hs109|chr8        ( 346) 1504 180.4   2e-45
CCDS350.1 KHDRBS1 gene_id:10657|Hs109|chr1         ( 443) 1434 172.7 5.4e-43
CCDS60067.1 KHDRBS1 gene_id:10657|Hs109|chr1       ( 404)  876 110.4 2.8e-24
CCDS5286.1 QKI gene_id:9444|Hs109|chr6             ( 319)  475 65.5   7e-11
CCDS43525.1 QKI gene_id:9444|Hs109|chr6            ( 319)  475 65.5   7e-11
CCDS5287.1 QKI gene_id:9444|Hs109|chr6             ( 325)  475 65.5 7.1e-11
CCDS5285.1 QKI gene_id:9444|Hs109|chr6             ( 341)  475 65.6 7.3e-11


>>CCDS4963.1 KHDRBS2 gene_id:202559|Hs109|chr6            (349 aa)
 initn: 2353 init1: 2353 opt: 2353  Z-score: 1441.0  bits: 275.1 E(33420): 6.2e-74
Smith-Waterman score: 2353; 99.7% identity (99.7% similar) in 349 aa overlap (1-349:1-349)

               10        20        30        40        50        60
pF1KB6 MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 EAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 EAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 SEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 SEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVAR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 GVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVP
              250       260       270       280       290       300

              310       320       330       340         
pF1KB6 EYYDYGHGVSEDAYDSYAPEEWATTSSSLKAPPQRSARGGYREHPYGRY
       ::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS49 EYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHPYGRY
              310       320       330       340         

>>CCDS6374.1 KHDRBS3 gene_id:10656|Hs109|chr8             (346 aa)
 initn: 1237 init1: 828 opt: 1504  Z-score: 929.1  bits: 180.4 E(33420): 2e-45
Smith-Waterman score: 1504; 67.8% identity (83.8% similar) in 357 aa overlap (3-349:2-346)

               10        20        30        40        50        60
pF1KB6 MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKL
         :::::::::::::::::::.:: ::. .:::::: ..::  :::: :.::. :::.::
CCDS63  MEEKYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGK--DEEK-YIDVVINKNMKL
                10        20        30        40           50      

               70        80        90       100       110       120
pF1KB6 SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSG
       ...:::::::.:::::::::::::::::::::::: .:::::::::::::::::::::::
CCDS63 GQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSG
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB6 EAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNG
       :::: ::.:.:::::::::::.:::.::.::::::::::.::::::::: ::.::.::::
CCDS63 EAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNG
        120       130       140       150       160       170      

                    190       200       210       220       230    
pF1KB6 -SEDSG----RGRG-IRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALP
        ::..     ::.  .: ::.  :: : .:::::.   :     ::..:::. . ::.: 
CCDS63 GSENADVPVVRGKPTLRTRGVP-AP-AITRGRGGVTARPV----GVVVPRGTPTPRGVLS
        180       190        200        210           220       230

           240         250       260        270       280       290
pF1KB6 V-PPVARG--VPTPRARGAPTVPGYRAPPPP-AHEAYEEYGYDDGYGGEYDDQTYETYDN
       .  ::.::  . ::::::.: . ::: :::: ..:.: :: ::::::  ::.:.:..:::
CCDS63 TRGPVSRGRGLLTPRARGVPPT-GYRPPPPPPTQETYGEYDYDDGYGTAYDEQSYDSYDN
              240       250        260       270       280         

              300       310       320       330       340         
pF1KB6 SYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSLKAPPQRSARGGYREHPYGRY
       ::.: .::  .:::::::.::..::::. :::  :.:  :::  :.:.: ::..:::::
CCDS63 SYSTPAQSGADYYDYGHGLSEETYDSYGQEEW--TNSRHKAPSARTAKGVYRDQPYGRY
     290       300       310       320         330       340      

>>CCDS350.1 KHDRBS1 gene_id:10657|Hs109|chr1              (443 aa)
 initn: 1213 init1: 789 opt: 1434  Z-score: 885.5  bits: 172.7 E(33420): 5.4e-43
Smith-Waterman score: 1434; 62.8% identity (81.1% similar) in 360 aa overlap (1-349:97-443)

                                              10        20         
pF1KB6                               ME-EEKYLPELMAEKDSLDPSFVHASRLLA
                                     :: :.:::::::::::::::::.:: .::.
CCDS35 LPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLT
         70        80        90       100       110       120      

      30        40        50        60        70        80         
pF1KB6 EEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLK
        ::::.: .:.::.:::. :::..:.::.::.::::::::::::::::::.:::.::..:
CCDS35 AEIEKIQKGDSKKDDEEN-YLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIK
        130       140        150       160       170       180     

      90       100       110       120       130       140         
pF1KB6 RLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMS
       :::::::::.:.:::::::::::::::::.:. :::::. .:::.::::.:: :::. :.
CCDS35 RLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMA
         190       200       210       220       230       240     

     150       160       170       180       190         200       
pF1KB6 HALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEDSGRGRGI--RGRGIRIAPTAPSRGRG
       ::.::.:::::::. :.: :::. :::::::  . .::::.  ::::   ::  :   ::
CCDS35 HAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGA--APPPPPVPRG
         250       260       270       280       290         300   

       210             220       230       240         250         
pF1KB6 GAIPPP------PPPGRGVLTPRGSTVTRGALPVPPVARGVPTPRAR--GAPTVPGYRAP
        .. ::        : ::..: ::.::::: .: ::..::.:.::::  :   .:    :
CCDS35 RGVGPPRGALVRGTPVRGAIT-RGATVTRG-VPPPPTVRGAPAPRARTAGIQRIP---LP
           310       320        330        340       350           

     260       270       280       290       300       310         
pF1KB6 PPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAP
       :::: :.:::::::: :.    .:.:: :.. : .:.:.  ::::::::  .:.:..:. 
CCDS35 PPPAPETYEEYGYDDTYA----EQSYEGYEG-YYSQSQGDSEYYDYGHGEVQDSYEAYGQ
      360       370           380        390       400       410   

     320       330       340         
pF1KB6 EEWATTSSSLKAPPQRSARGGYREHPYGRY
       ..:  :  :::::: : ..:.:::::::::
CCDS35 DDWNGTRPSLKAPPARPVKGAYREHPYGRY
           420       430       440   

>>CCDS60067.1 KHDRBS1 gene_id:10657|Hs109|chr1            (404 aa)
 initn: 1029 init1: 408 opt: 876  Z-score: 549.6  bits: 110.4 E(33420): 2.8e-24
Smith-Waterman score: 1116; 53.6% identity (70.3% similar) in 360 aa overlap (1-349:97-404)

                                              10        20         
pF1KB6                               ME-EEKYLPELMAEKDSLDPSFVHASRLLA
                                     :: :.:::::::::::::::::.:: .::.
CCDS60 LPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLT
         70        80        90       100       110       120      

      30        40        50        60        70        80         
pF1KB6 EEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLK
        ::::.: .:.::.:::. :::..:.::.::.::::::::::::                
CCDS60 AEIEKIQKGDSKKDDEEN-YLDLFSHKNMKLKERVLIPVKQYPK----------------
        130       140        150       160                         

      90       100       110       120       130       140         
pF1KB6 RLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMS
                              ::::::.:. :::::. .:::.::::.:: :::. :.
CCDS60 -----------------------EEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMA
                            170       180       190       200      

     150       160       170       180       190         200       
pF1KB6 HALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEDSGRGRGI--RGRGIRIAPTAPSRGRG
       ::.::.:::::::. :.: :::. :::::::  . .::::.  ::::   ::  :   ::
CCDS60 HAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVPVRGRGA--APPPPPVPRG
        210       220       230       240       250         260    

       210             220       230       240         250         
pF1KB6 GAIPPP------PPPGRGVLTPRGSTVTRGALPVPPVARGVPTPRAR--GAPTVPGYRAP
        .. ::        : ::..: ::.::::: .: ::..::.:.::::  :   .:    :
CCDS60 RGVGPPRGALVRGTPVRGAIT-RGATVTRG-VPPPPTVRGAPAPRARTAGIQRIP---LP
          270       280        290        300       310            

     260       270       280       290       300       310         
pF1KB6 PPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAP
       :::: :.:::::::: :.    .:.:: :.. : .:.:.  ::::::::  .:.:..:. 
CCDS60 PPPAPETYEEYGYDDTYA----EQSYEGYEG-YYSQSQGDSEYYDYGHGEVQDSYEAYGQ
     320       330           340        350       360       370    

     320       330       340         
pF1KB6 EEWATTSSSLKAPPQRSARGGYREHPYGRY
       ..:  :  :::::: : ..:.:::::::::
CCDS60 DDWNGTRPSLKAPPARPVKGAYREHPYGRY
          380       390       400    

>>CCDS5286.1 QKI gene_id:9444|Hs109|chr6                  (319 aa)
 initn: 340 init1: 271 opt: 475  Z-score: 309.0  bits: 65.5 E(33420): 7e-11
Smith-Waterman score: 484; 36.2% identity (59.9% similar) in 287 aa overlap (6-272:17-290)

                          10          20            30             
pF1KB6            MEEEKYLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS-----
                       :: .:: .:  ..  :.:     :  ::: ::: . . .     
CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
               10        20        30        40        50        60

        40        50        60        70        80        90       
pF1KB6 -DGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGA
        .:. : .  .  :...   ..:.:.. .:::.:: :::::..::::: . :.:. ::: 
CCDS52 LNGSTEKRSAELPDAVG-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC
               70         80        90       100       110         

       100       110       120       130       140       150       
pF1KB6 KMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKK
       :. . :::::::: :::. :  :. .. ::...::::: :    ..:  ....:.::.::
CCDS52 KIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKK
     120       130         140       150       160       170       

       160         170       180       190         200       210   
pF1KB6 FLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGRGGAIPPP
       .:::  . .: ... :: ::. :::.    :  .:.. ..   .: :: .  :  . : :
CCDS52 LLVPAAEGEDSLKKMQLMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAP
       180       190       200          210       220       230    

             220       230       240        250       260          
pF1KB6 --PPPGRGVLTPRGSTVTRGALPVPPVARGVPTP-RARGAPTVPGYRAPP-PPAHEAYEE
         :: .  . :: : :.        :. : . :     :.:   .  .:: : :   :  
CCDS52 VLPPAALRTPTPAGPTIM-------PLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP
          240       250              260       270       280       

     270       280       290       300       310       320         
pF1KB6 YGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSL
       : :                                                         
CCDS52 YEYPYTLAPATSILEYPIEPSGVLGMAFPTKG                            
       290       300       310                                     

>>CCDS43525.1 QKI gene_id:9444|Hs109|chr6                 (319 aa)
 initn: 340 init1: 271 opt: 475  Z-score: 309.0  bits: 65.5 E(33420): 7e-11
Smith-Waterman score: 484; 36.2% identity (59.9% similar) in 287 aa overlap (6-272:17-290)

                          10          20            30             
pF1KB6            MEEEKYLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS-----
                       :: .:: .:  ..  :.:     :  ::: ::: . . .     
CCDS43 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
               10        20        30        40        50        60

        40        50        60        70        80        90       
pF1KB6 -DGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGA
        .:. : .  .  :...   ..:.:.. .:::.:: :::::..::::: . :.:. ::: 
CCDS43 LNGSTEKRSAELPDAVG-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC
               70         80        90       100       110         

       100       110       120       130       140       150       
pF1KB6 KMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKK
       :. . :::::::: :::. :  :. .. ::...::::: :    ..:  ....:.::.::
CCDS43 KIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKK
     120       130         140       150       160       170       

       160         170       180       190         200       210   
pF1KB6 FLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGRGGAIPPP
       .:::  . .: ... :: ::. :::.    :  .:.. ..   .: :: .  :  . : :
CCDS43 LLVPAAEGEDSLKKMQLMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAP
       180       190       200          210       220       230    

             220       230       240        250       260          
pF1KB6 --PPPGRGVLTPRGSTVTRGALPVPPVARGVPTP-RARGAPTVPGYRAPP-PPAHEAYEE
         :: .  . :: : :.        :. : . :     :.:   .  .:: : :   :  
CCDS43 VLPPAALRTPTPAGPTIM-------PLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP
          240       250              260       270       280       

     270       280       290       300       310       320         
pF1KB6 YGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSL
       : :                                                         
CCDS43 YEYPYTLAPATSILEYPIEPSGVLGKFFSPWG                            
       290       300       310                                     

>>CCDS5287.1 QKI gene_id:9444|Hs109|chr6                  (325 aa)
 initn: 340 init1: 271 opt: 475  Z-score: 308.9  bits: 65.5 E(33420): 7.1e-11
Smith-Waterman score: 484; 36.2% identity (59.9% similar) in 287 aa overlap (6-272:17-290)

                          10          20            30             
pF1KB6            MEEEKYLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS-----
                       :: .:: .:  ..  :.:     :  ::: ::: . . .     
CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
               10        20        30        40        50        60

        40        50        60        70        80        90       
pF1KB6 -DGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGA
        .:. : .  .  :...   ..:.:.. .:::.:: :::::..::::: . :.:. ::: 
CCDS52 LNGSTEKRSAELPDAVG-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC
               70         80        90       100       110         

       100       110       120       130       140       150       
pF1KB6 KMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKK
       :. . :::::::: :::. :  :. .. ::...::::: :    ..:  ....:.::.::
CCDS52 KIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKK
     120       130         140       150       160       170       

       160         170       180       190         200       210   
pF1KB6 FLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGRGGAIPPP
       .:::  . .: ... :: ::. :::.    :  .:.. ..   .: :: .  :  . : :
CCDS52 LLVPAAEGEDSLKKMQLMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAP
       180       190       200          210       220       230    

             220       230       240        250       260          
pF1KB6 --PPPGRGVLTPRGSTVTRGALPVPPVARGVPTP-RARGAPTVPGYRAPP-PPAHEAYEE
         :: .  . :: : :.        :. : . :     :.:   .  .:: : :   :  
CCDS52 VLPPAALRTPTPAGPTIM-------PLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP
          240       250              260       270       280       

     270       280       290       300       310       320         
pF1KB6 YGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSL
       : :                                                         
CCDS52 YEYPYTLAPATSILEYPIEPSGVLEWIEMPVMPDISAH                      
       290       300       310       320                           

>>CCDS5285.1 QKI gene_id:9444|Hs109|chr6                  (341 aa)
 initn: 340 init1: 271 opt: 475  Z-score: 308.7  bits: 65.6 E(33420): 7.3e-11
Smith-Waterman score: 484; 36.2% identity (59.9% similar) in 287 aa overlap (6-272:17-290)

                          10          20            30             
pF1KB6            MEEEKYLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS-----
                       :: .:: .:  ..  :.:     :  ::: ::: . . .     
CCDS52 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
               10        20        30        40        50        60

        40        50        60        70        80        90       
pF1KB6 -DGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGA
        .:. : .  .  :...   ..:.:.. .:::.:: :::::..::::: . :.:. ::: 
CCDS52 LNGSTEKRSAELPDAVG-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC
               70         80        90       100       110         

       100       110       120       130       140       150       
pF1KB6 KMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKK
       :. . :::::::: :::. :  :. .. ::...::::: :    ..:  ....:.::.::
CCDS52 KIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKK
     120       130         140       150       160       170       

       160         170       180       190         200       210   
pF1KB6 FLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGRGGAIPPP
       .:::  . .: ... :: ::. :::.    :  .:.. ..   .: :: .  :  . : :
CCDS52 LLVPAAEGEDSLKKMQLMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAP
       180       190       200          210       220       230    

             220       230       240        250       260          
pF1KB6 --PPPGRGVLTPRGSTVTRGALPVPPVARGVPTP-RARGAPTVPGYRAPP-PPAHEAYEE
         :: .  . :: : :.        :. : . :     :.:   .  .:: : :   :  
CCDS52 VLPPAALRTPTPAGPTIM-------PLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP
          240       250              260       270       280       

     270       280       290       300       310       320         
pF1KB6 YGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTSSSL
       : :                                                         
CCDS52 YEYPYTLAPATSILEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN      
       290       300       310       320       330       340       




349 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Oct 24 21:40:37 2019 done: Thu Oct 24 21:40:38 2019
 Total Scan time:  1.510 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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