Result of FASTA (omim) for
pF1KB6457
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6457, 318 aa
1>>>pF1KB6457 318 - 318 aa - 318 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7558+/-0.00031; mu= 15.2978+/- 0.020
mean_var=96.8729+/-19.456, 0's: 0 Z-trim(118.5): 81 B-trim: 56 in 1/50
Lambda= 0.130309
statistics sampled from 31460 (31547) to 31460 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.37), width: 16
Scan time: 8.230
The best scores are: opt bits E(85289)
NP_057105 (OMIM: 616175) ubiquitin-conjugating enz ( 318) 2122 408.7 8e-114
XP_011534190 (OMIM: 616175) PREDICTED: ubiquitin-c ( 235) 1531 297.5 1.8e-80
XP_011534189 (OMIM: 616175) PREDICTED: ubiquitin-c ( 278) 1285 251.3 1.7e-66
NP_003329 (OMIM: 602961) ubiquitin-conjugating enz ( 147) 263 58.9 7.2e-09
NP_003332 (OMIM: 602916) ubiquitin-conjugating enz ( 193) 258 58.1 1.7e-08
XP_005265490 (OMIM: 602163) PREDICTED: ubiquitin-c ( 189) 255 57.5 2.5e-08
XP_005265488 (OMIM: 602916) PREDICTED: ubiquitin-c ( 167) 254 57.3 2.6e-08
XP_005265489 (OMIM: 602163) PREDICTED: ubiquitin-c ( 201) 254 57.4 2.9e-08
NP_689866 (OMIM: 602163) ubiquitin-conjugating enz ( 201) 254 57.4 2.9e-08
NP_001189405 (OMIM: 602916) ubiquitin-conjugating ( 160) 250 56.5 4.2e-08
XP_005246301 (OMIM: 604151) PREDICTED: ubiquitin-c ( 207) 243 55.3 1.3e-07
NP_001265483 (OMIM: 604151) ubiquitin-conjugating ( 207) 243 55.3 1.3e-07
NP_001265484 (OMIM: 604151) ubiquitin-conjugating ( 207) 243 55.3 1.3e-07
NP_872619 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 243 55.3 1.3e-07
NP_006348 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 243 55.3 1.3e-07
NP_871619 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871620 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871618 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871615 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871616 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871617 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_003331 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 239 54.4 1.6e-07
NP_871621 (OMIM: 602963) ubiquitin-conjugating enz ( 148) 239 54.4 1.6e-07
NP_003330 (OMIM: 602962) ubiquitin-conjugating enz ( 147) 238 54.2 1.9e-07
NP_003339 (OMIM: 603679) ubiquitin-conjugating enz ( 152) 229 52.6 6.2e-07
NP_871622 (OMIM: 602963) ubiquitin-conjugating enz ( 149) 225 51.8 1e-06
NP_872607 (OMIM: 602916) ubiquitin-conjugating enz ( 176) 216 50.2 3.8e-06
XP_016865309 (OMIM: 602962) PREDICTED: ubiquitin-c ( 173) 214 49.8 4.8e-06
NP_003333 (OMIM: 601569) ubiquitin-conjugating enz ( 170) 208 48.7 1e-05
NP_003328 (OMIM: 179095) ubiquitin-conjugating enz ( 152) 202 47.5 2.1e-05
NP_003327 (OMIM: 300860,312180) ubiquitin-conjugat ( 152) 197 46.6 4e-05
NP_075567 (OMIM: 611362) ubiquitin-conjugating enz ( 354) 190 45.5 0.00019
NP_003334 (OMIM: 603124) ubiquitin-conjugating enz ( 165) 183 43.9 0.00026
XP_016864073 (OMIM: 602963) PREDICTED: ubiquitin-c ( 118) 178 42.9 0.00039
NP_001287724 (OMIM: 602963) ubiquitin-conjugating ( 118) 178 42.9 0.00039
NP_862821 (OMIM: 602962) ubiquitin-conjugating enz ( 118) 178 42.9 0.00039
NP_005330 (OMIM: 602846) ubiquitin-conjugating enz ( 200) 179 43.3 0.00051
NP_003338 (OMIM: 603721) ubiquitin-conjugating enz ( 154) 176 42.6 0.00062
NP_001104582 (OMIM: 602846) ubiquitin-conjugating ( 157) 174 42.2 0.00082
NP_055316 (OMIM: 610309) ubiquitin-conjugating enz ( 222) 174 42.4 0.0011
XP_006723015 (OMIM: 116948) PREDICTED: ubiquitin-c ( 179) 170 41.5 0.0015
XP_011516251 (OMIM: 612506) PREDICTED: ubiquitin-c ( 193) 169 41.4 0.0018
NP_004350 (OMIM: 116948) ubiquitin-conjugating enz ( 236) 170 41.6 0.0019
XP_005259747 (OMIM: 116948) PREDICTED: ubiquitin-c ( 269) 170 41.7 0.0021
XP_011525054 (OMIM: 610309) PREDICTED: ubiquitin-c ( 162) 167 40.9 0.0021
NP_060281 (OMIM: 612506) ubiquitin-conjugating enz ( 238) 169 41.4 0.0021
NP_008950 (OMIM: 605574) ubiquitin-conjugating enz ( 179) 167 41.0 0.0023
XP_016884424 (OMIM: 603721) PREDICTED: ubiquitin-c ( 121) 164 40.3 0.0025
XP_016872098 (OMIM: 602961) PREDICTED: ubiquitin-c ( 110) 158 39.1 0.0051
>>NP_057105 (OMIM: 616175) ubiquitin-conjugating enzyme (318 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 2164.5 bits: 408.7 E(85289): 8e-114
Smith-Waterman score: 2122; 99.7% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KB6 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTFQGATASTSYGVQNSSAASFHQP
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
NP_057 RQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTFQGATASTSYGLQNSSAASFHQP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGGSAVLIVILTLALAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGGSAVLIVILTLALAA
250 260 270 280 290 300
310
pF1KB6 LIFRRIYLANEYIFDFEL
::::::::::::::::::
NP_057 LIFRRIYLANEYIFDFEL
310
>>XP_011534190 (OMIM: 616175) PREDICTED: ubiquitin-conju (235 aa)
initn: 1553 init1: 1531 opt: 1531 Z-score: 1565.8 bits: 297.5 E(85289): 1.8e-80
Smith-Waterman score: 1531; 99.6% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KB6 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTFQGATASTSYGVQNSSAASFHQP
::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 RQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTFQGATASTSFQTKFLKIS
190 200 210 220 230
250 260 270 280 290 300
pF1KB6 TQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGGSAVLIVILTLALAA
>>XP_011534189 (OMIM: 616175) PREDICTED: ubiquitin-conju (278 aa)
initn: 1282 init1: 1282 opt: 1285 Z-score: 1314.9 bits: 251.3 E(85289): 1.7e-66
Smith-Waterman score: 1787; 87.1% identity (87.4% similar) in 318 aa overlap (1-318:1-278)
10 20 30 40 50 60
pF1KB6 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTFQGATASTSYGVQNSSAASFHQP
:::::: ::.:::::::::::
XP_011 RQISFK----------------------------------------YGLQNSSAASFHQP
190 200
250 260 270 280 290 300
pF1KB6 TQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGGSAVLIVILTLALAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQPRDNHTDHGGSAVLIVILTLALAA
210 220 230 240 250 260
310
pF1KB6 LIFRRIYLANEYIFDFEL
::::::::::::::::::
XP_011 LIFRRIYLANEYIFDFEL
270
>>NP_003329 (OMIM: 602961) ubiquitin-conjugating enzyme (147 aa)
initn: 223 init1: 202 opt: 263 Z-score: 280.2 bits: 58.9 E(85289): 7.2e-09
Smith-Waterman score: 263; 36.6% identity (69.6% similar) in 112 aa overlap (11-119:2-110)
10 20 30 40 50
pF1KB6 METRYNLKSPAVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYH
:.::..:: ..: .:: : : :. :.::.:. :. ::::: ..:::.
NP_003 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFF
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 GRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSISGHHPETWQPSWSIRTALLAIIG
. .: .::.:::.: . : . ..... :::.: . :.:. .. .::.: .
NP_003 LTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ---WSPALTVSKVLLSICS
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 FMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQADQEAK
..
NP_003 LLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM
110 120 130 140
>>NP_003332 (OMIM: 602916) ubiquitin-conjugating enzyme (193 aa)
initn: 188 init1: 188 opt: 258 Z-score: 273.6 bits: 58.1 E(85289): 1.7e-08
Smith-Waterman score: 258; 33.3% identity (65.2% similar) in 135 aa overlap (1-130:38-169)
10 20
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHY
: .: : ..::..:: :.. :: .
NP_003 ASTSSSSSSSSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNC
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB6 HAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK
: : ::..::. :. ::: : ..:::. :.. ::::.:::.. . : . .....
NP_003 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB6 --ICLSISGHHPETWQPSWSIRTALLAIIGFMP--TKGEGAIGSLDYTPEERRALAKKSQ
:::.: ..:.:. .: .::.: ... . .. .::.
NP_003 GVICLDI---LKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMA
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB6 DFCCEGCGSAMKDVLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLNHSF
NP_003 RQWTKRYAT
190
>>XP_005265490 (OMIM: 602163) PREDICTED: ubiquitin-conju (189 aa)
initn: 184 init1: 184 opt: 255 Z-score: 270.6 bits: 57.5 E(85289): 2.5e-08
Smith-Waterman score: 255; 35.0% identity (66.7% similar) in 120 aa overlap (9-125:54-170)
10 20 30
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDN
: ..::..:: ::. :: . : : ::
XP_005 RESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDN
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB6 LFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSIS
..::. :. ::: : ..:::. :.. :.::.:::.. . : . ..... :::.:
XP_005 IYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB6 GHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSA
..:.:. .: .::.: ... . :
XP_005 ---KDNWSPALTISKVLLSICSLLTDCNPGDFEAWPALPPSQLKWNLLP
150 160 170 180
>>XP_005265488 (OMIM: 602916) PREDICTED: ubiquitin-conju (167 aa)
initn: 188 init1: 188 opt: 254 Z-score: 270.3 bits: 57.3 E(85289): 2.6e-08
Smith-Waterman score: 254; 33.9% identity (66.1% similar) in 121 aa overlap (10-127:14-131)
10 20 30 40 50
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDG
:. .:..:: :.. :: . : : ::..::. :. ::: : ..:
XP_005 MKEVGRPREVRGRPGKSRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 GVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSISGHHPETWQPSWSIRTALL
::. :.. ::::.:::.. . : . ..... :::.: ..:.:. .: .::
XP_005 GVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDI---LKDNWSPALTISKVLL
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 AIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQAD
.: ... . : .
XP_005 SICSLLTDCNPGKVHNSLPCFILPYLKNTCFQKLSKDKTNFSAQVCEYKN
120 130 140 150 160
>>XP_005265489 (OMIM: 602163) PREDICTED: ubiquitin-conju (201 aa)
initn: 184 init1: 184 opt: 254 Z-score: 269.3 bits: 57.4 E(85289): 2.9e-08
Smith-Waterman score: 254; 33.9% identity (66.9% similar) in 127 aa overlap (9-130:54-177)
10 20 30
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDN
: ..::..:: ::. :: . : : ::
XP_005 RESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDN
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB6 LFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSIS
..::. :. ::: : ..:::. :.. :.::.:::.. . : . ..... :::.:
XP_005 IYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB6 GHHPETWQPSWSIRTALLAIIGFMP--TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCG
..:.:. .: .::.: ... . .. .::.
XP_005 ---KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB6 SAMKDVLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLNHSFSLTDLQDD
XP_005 T
>>NP_689866 (OMIM: 602163) ubiquitin-conjugating enzyme (201 aa)
initn: 184 init1: 184 opt: 254 Z-score: 269.3 bits: 57.4 E(85289): 2.9e-08
Smith-Waterman score: 254; 33.9% identity (66.9% similar) in 127 aa overlap (9-130:54-177)
10 20 30
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDN
: ..::..:: ::. :: . : : ::
NP_689 RESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDN
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB6 LFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSIS
..::. :. ::: : ..:::. :.. :.::.:::.. . : . ..... :::.:
NP_689 IYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB6 GHHPETWQPSWSIRTALLAIIGFMP--TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCG
..:.:. .: .::.: ... . .. .::.
NP_689 ---KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB6 SAMKDVLLPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLNHSFSLTDLQDD
NP_689 T
>>NP_001189405 (OMIM: 602916) ubiquitin-conjugating enzy (160 aa)
initn: 188 init1: 188 opt: 250 Z-score: 266.5 bits: 56.5 E(85289): 4.2e-08
Smith-Waterman score: 250; 33.3% identity (66.7% similar) in 126 aa overlap (10-130:14-136)
10 20 30 40 50
pF1KB6 METRYNLKSPAVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDG
:. .:..:: :.. :: . : : ::..::. :. ::: : ..:
NP_001 MKEVGRPREVRGRPGKSRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 GVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKK--ICLSISGHHPETWQPSWSIRTALL
::. :.. ::::.:::.. . : . ..... :::.: ..:.:. .: .::
NP_001 GVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL---KDNWSPALTISKVLL
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 AIIGFMP--TKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGSDSSQ
.: ... . .. .::.
NP_001 SICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
120 130 140 150 160
318 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:02:40 2016 done: Fri Nov 4 23:02:41 2016
Total Scan time: 8.230 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]