Result of FASTA (ccds) for
pF1KB6509
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6509, 359 aa
1>>>pF1KB6509 359 - 359 aa - 359 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0121+/-0.000911; mu= 13.2624+/- 0.055
mean_var=100.0255+/-20.138, 0's: 0 Z-trim(108.4): 189 B-trim: 8 in 1/49
Lambda= 0.128239
statistics sampled from 9982 (10202) to 9982 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.313), width: 16
Scan time: 2.120
The best scores are: opt bits E(32554)
CCDS9039.1 DCN gene_id:1634|Hs108|chr12 ( 359) 2376 450.1 1.4e-126
CCDS14721.1 BGN gene_id:633|Hs108|chrX ( 368) 1281 247.5 1.4e-65
CCDS9040.1 DCN gene_id:1634|Hs108|chr12 ( 250) 1184 229.4 2.5e-60
CCDS9041.1 DCN gene_id:1634|Hs108|chr12 ( 212) 942 184.6 6.7e-47
CCDS9042.1 DCN gene_id:1634|Hs108|chr12 ( 172) 797 157.7 6.8e-39
CCDS44951.1 DCN gene_id:1634|Hs108|chr12 ( 75) 510 104.3 3.5e-23
CCDS1438.1 PRELP gene_id:5549|Hs108|chr1 ( 382) 498 102.6 5.7e-22
CCDS9038.1 LUM gene_id:4060|Hs108|chr12 ( 338) 478 98.9 6.7e-21
CCDS56578.1 ECM2 gene_id:1842|Hs108|chr9 ( 643) 454 94.7 2.4e-19
CCDS6698.1 ECM2 gene_id:1842|Hs108|chr9 ( 699) 454 94.7 2.5e-19
CCDS30971.1 LGR6 gene_id:59352|Hs108|chr1 ( 967) 434 91.1 4.2e-18
CCDS30976.1 FMOD gene_id:2331|Hs108|chr1 ( 376) 425 89.1 6.5e-18
CCDS31449.1 LGR4 gene_id:55366|Hs108|chr11 ( 951) 423 89.1 1.7e-17
CCDS5799.1 LRRC4 gene_id:64101|Hs108|chr7 ( 653) 409 86.4 7.7e-17
CCDS31464.1 LRRC4C gene_id:57689|Hs108|chr11 ( 640) 405 85.6 1.3e-16
CCDS54226.1 PODNL1 gene_id:79883|Hs108|chr19 ( 510) 402 85.0 1.6e-16
CCDS12300.1 PODNL1 gene_id:79883|Hs108|chr19 ( 512) 402 85.0 1.6e-16
CCDS6696.1 OMD gene_id:4958|Hs108|chr9 ( 421) 396 83.8 2.9e-16
CCDS9000.1 LGR5 gene_id:8549|Hs108|chr12 ( 907) 400 84.8 3.2e-16
CCDS42595.1 LRRC4B gene_id:94030|Hs108|chr19 ( 713) 377 80.5 5e-15
CCDS61194.1 LGR5 gene_id:8549|Hs108|chr12 ( 883) 378 80.7 5.2e-15
CCDS4369.1 SLIT3 gene_id:6586|Hs108|chr5 (1523) 377 80.7 9e-15
CCDS64311.1 SLIT3 gene_id:6586|Hs108|chr5 (1530) 377 80.7 9e-15
CCDS33783.1 LRIG1 gene_id:26018|Hs108|chr3 (1093) 372 79.7 1.3e-14
CCDS47218.1 LRRC70 gene_id:100130733|Hs108|chr5 ( 622) 365 78.2 2.1e-14
CCDS30855.1 LINGO4 gene_id:339398|Hs108|chr1 ( 593) 364 78.0 2.3e-14
CCDS7453.1 SLIT1 gene_id:6585|Hs108|chr10 (1534) 369 79.2 2.5e-14
CCDS61195.1 LGR5 gene_id:8549|Hs108|chr12 ( 835) 361 77.6 4.4e-14
CCDS13121.1 FLRT3 gene_id:23767|Hs108|chr20 ( 649) 356 76.5 6.9e-14
CCDS3306.1 LRRC15 gene_id:131578|Hs108|chr3 ( 581) 352 75.8 1.1e-13
CCDS46984.1 LRRC15 gene_id:131578|Hs108|chr3 ( 587) 352 75.8 1.1e-13
CCDS47272.1 LRRTM2 gene_id:26045|Hs108|chr5 ( 516) 347 74.8 1.8e-13
CCDS75111.1 SLIT2 gene_id:9353|Hs108|chr4 (1521) 353 76.3 2e-13
CCDS75110.1 SLIT2 gene_id:9353|Hs108|chr4 (1525) 353 76.3 2e-13
CCDS3426.1 SLIT2 gene_id:9353|Hs108|chr4 (1529) 353 76.3 2e-13
CCDS55601.1 PODN gene_id:127435|Hs108|chr1 ( 519) 340 73.5 4.5e-13
CCDS55602.1 PODN gene_id:127435|Hs108|chr1 ( 642) 340 73.6 5.3e-13
CCDS573.1 PODN gene_id:127435|Hs108|chr1 ( 661) 340 73.6 5.4e-13
CCDS8057.1 FLRT1 gene_id:23769|Hs108|chr11 ( 674) 338 73.2 7.1e-13
CCDS45905.1 LINGO3 gene_id:645191|Hs108|chr19 ( 592) 337 73.0 7.3e-13
CCDS8960.1 LRIG3 gene_id:121227|Hs108|chr12 (1119) 339 73.6 9.3e-13
CCDS44933.1 LRIG3 gene_id:121227|Hs108|chr12 (1059) 333 72.5 1.9e-12
CCDS7957.1 RTN4RL2 gene_id:349667|Hs108|chr11 ( 420) 325 70.7 2.6e-12
CCDS47855.1 PXDNL gene_id:137902|Hs108|chr8 (1463) 332 72.4 2.8e-12
CCDS46715.1 CHADL gene_id:150356|Hs108|chr22 ( 762) 327 71.2 3.2e-12
CCDS73766.1 LINGO1 gene_id:84894|Hs108|chr15 ( 614) 318 69.5 8.6e-12
CCDS45313.1 LINGO1 gene_id:84894|Hs108|chr15 ( 620) 318 69.5 8.7e-12
CCDS46221.1 PXDN gene_id:7837|Hs108|chr2 (1479) 317 69.6 1.9e-11
CCDS7270.1 LRRTM3 gene_id:347731|Hs108|chr10 ( 581) 308 67.6 3e-11
CCDS9877.1 FLRT2 gene_id:23768|Hs108|chr14 ( 660) 308 67.7 3.3e-11
>>CCDS9039.1 DCN gene_id:1634|Hs108|chr12 (359 aa)
initn: 2376 init1: 2376 opt: 2376 Z-score: 2386.1 bits: 450.1 E(32554): 1.4e-126
Smith-Waterman score: 2376; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 SPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
310 320 330 340 350
>>CCDS14721.1 BGN gene_id:633|Hs108|chrX (368 aa)
initn: 707 init1: 642 opt: 1281 Z-score: 1291.1 bits: 247.5 E(32554): 1.4e-65
Smith-Waterman score: 1326; 55.8% identity (78.7% similar) in 362 aa overlap (7-359:7-367)
10 20 30 40 50
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLED--------EASGIGPE-VPDDRDFEPSLG
:. : .: : ::.:::..:: :.: :::: : : . :. .
CCDS14 MWPLWRLVSLLALSQALPFEQRGFWDFTLDDGPFMMNDEEASGADTSGVLDPDSVTPTYS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 PVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALI
.::: :.::::::::::::: .:::.. ::::::::::: :.:.. :::.:..:.::.
CCDS14 AMCPFGCHCHLRVVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LVNNKISKVSPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFN
::::::::. ::.:: ::..::.:::.: :.: ..:..: ::: :.:.: :: : .:.
CCDS14 LVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 GLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGN
:: .: ::.: :::..::.: :::.:.: :.:.::.....:.::. :: .:.::::: :
CCDS14 GLRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRISEAKLTGIPKDLPETLNELHLDHN
190 200 210 220 230
240 250 260 270 280 290
pF1KB6 KISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEH
::. .. .: ..: .:::. :.: ..::::. : :::::::::::.:::.:: .
CCDS14 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLARVPSGLPDL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 KYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRS
: .::::::.:::. :: .:::: : ..:.: :.:.:::.::: :::.::.::::: :
CCDS14 KLLQVVYLHSNNITKVGVNDFCPMGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRL
300 310 320 330 340 350
pF1KB6 AIQLGNYK
:::.::::
CCDS14 AIQFGNYKK
360
>>CCDS9040.1 DCN gene_id:1634|Hs108|chr12 (250 aa)
initn: 1184 init1: 1184 opt: 1184 Z-score: 1196.4 bits: 229.4 E(32554): 2.5e-60
Smith-Waterman score: 1456; 69.6% identity (69.6% similar) in 359 aa overlap (1-359:1-250)
10 20 30 40 50 60
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
::::::::::
CCDS90 HLRVVQCSDL--------------------------------------------------
70
130 140 150 160 170 180
pF1KB6 SPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIE
:
CCDS90 -----------------------------------------------------------E
190 200 210 220 230 240
pF1KB6 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
80 90 100 110 120 130
250 260 270 280 290 300
pF1KB6 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
140 150 160 170 180 190
310 320 330 340 350
pF1KB6 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
200 210 220 230 240 250
>>CCDS9041.1 DCN gene_id:1634|Hs108|chr12 (212 aa)
initn: 942 init1: 942 opt: 942 Z-score: 955.5 bits: 184.6 E(32554): 6.7e-47
Smith-Waterman score: 1140; 59.1% identity (59.1% similar) in 359 aa overlap (1-359:1-212)
10 20 30 40 50 60
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
::::::::::::
CCDS90 HLRVVQCSDLGL------------------------------------------------
70
130 140 150 160 170 180
pF1KB6 SPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIE
CCDS90 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB6 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
:::::::::::::::::::::
CCDS90 ---------------------------------------PPSLTELHLDGNKISRVDAAS
80 90
250 260 270 280 290 300
pF1KB6 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
100 110 120 130 140 150
310 320 330 340 350
pF1KB6 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
160 170 180 190 200 210
>>CCDS9042.1 DCN gene_id:1634|Hs108|chr12 (172 aa)
initn: 825 init1: 797 opt: 797 Z-score: 811.7 bits: 157.7 E(32554): 6.8e-39
Smith-Waterman score: 813; 47.9% identity (47.9% similar) in 359 aa overlap (1-359:1-172)
10 20 30 40 50 60
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLH------------
70 80 90 100
130 140 150 160 170 180
pF1KB6 SPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIE
CCDS90 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB6 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAAS
CCDS90 ------------------------------------------------------------
250 260 270 280 290 300
pF1KB6 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLH
:::::
CCDS90 -------------------------------------------------------VVYLH
110
310 320 330 340 350
pF1KB6 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 NNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
120 130 140 150 160 170
>>CCDS44951.1 DCN gene_id:1634|Hs108|chr12 (75 aa)
initn: 510 init1: 510 opt: 510 Z-score: 529.8 bits: 104.3 E(32554): 3.5e-23
Smith-Waterman score: 510; 100.0% identity (100.0% similar) in 71 aa overlap (1-71:1-71)
10 20 30 40 50 60
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV
:::::::::::
CCDS44 HLRVVQCSDLGCLPS
70
>>CCDS1438.1 PRELP gene_id:5549|Hs108|chr1 (382 aa)
initn: 432 init1: 335 opt: 498 Z-score: 508.0 bits: 102.6 E(32554): 5.7e-22
Smith-Waterman score: 498; 31.5% identity (64.7% similar) in 289 aa overlap (32-314:54-333)
10 20 30 40 50 60
pF1KB6 KATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC-
: . . : .: ::. : :: .: :
CCDS14 RRPRPGTGPGRRPRPRPRPTPSFPQPDEPAEPTDLPPPLPPG---PPSIFPDCPRECYCP
30 40 50 60 70 80
70 80 90 100 110
pF1KB6 --HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKIS
.. :.. .: ::: .:: : :::: :::. .:.: .:. . : ::.:
CCDS14 PDFPSALYCDSRNLRKVPV-IPPRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIR
90 100 110 120 130
120 130 140 150 160 170
pF1KB6 KVSPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIV
:.. .. : : ::. ::::.:.: .:..:..:: .:.:... .:. :.....
CCDS14 KIDQRVLEKLPGLVFLYMEKNQLEEVPSALPRNLEQLRLSQNHISRIPPGVFSKLENLLL
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB6 IELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDA
..: : :... .. .:.:.:.: . .: . . ..: .: .. .:.::.::: .
CCDS14 LDLQHNRLSDGVFKPDTFHGLKNLMQLNLAHNILRKMPPRVPTAIHQLYLDSNKIETIPN
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB6 ASLKGLNNLAKLGLSFNSISAVDNGSLANT---PHLRELHLDNNKLTRVPGGLAEHKYIQ
. .:.. ::: . :..:... : : :. .: :::..:... :: : .. ..
CCDS14 GYFKSFPNLAFIRLNYNKLT--DRGLPKNSFNISNLLVLHLSHNRISSVP---AINNRLE
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB6 VVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQL
.::.::.: ......::
CCDS14 HLYLNNNSIEKINGTQICPNDLVAFHDFSSDLENVPHLRYLRLDGNYLKPPIPLDLMMCF
320 330 340 350 360 370
>>CCDS9038.1 LUM gene_id:4060|Hs108|chr12 (338 aa)
initn: 293 init1: 159 opt: 478 Z-score: 488.7 bits: 98.9 E(32554): 6.7e-21
Smith-Waterman score: 478; 31.5% identity (62.7% similar) in 324 aa overlap (43-355:22-337)
20 30 40 50 60
pF1KB6 VSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSL----GPVCPFRCQC---HLRVV
: :: :. .: : .:.: . ..
CCDS90 MSLSAFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCPESYPSAM
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKI--SKVSPG
:..: : .:: .:: : :.::.: .: . :.:. .:. ::: .: . ::..
CCDS90 YCDELKLKSVPM-VPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 AFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQMIVIELGT
.:. : .:..:....:.: : .::.:..:. .:.:::. .:.:: .. :.:
CCDS90 VFSKLKQLKKLHINHNNLTESVGPLPKSLEDLQLTHNKITKLG--SFEGLVNLTFIHLQH
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 NPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISRVDAASLKG
: :: ... ..::.:.:.: :. .. ..:. .:.::: :: :.::.:::: . .:
CCDS90 NRLKEDAV-SAAFKGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIPDEYFKR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 LNNLAKLGLSFNSI--SAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHN
.: : : :: : . :.. ..:. :. : :: :. ::: .: . .. .. ::.
CCDS90 FNALQYLRLSHNELADSGIPGNSF-NVSSLVELDLSYNKLKNIP---TVNENLENYYLEV
230 240 250 260 270 280
310 320 330 340 350
pF1KB6 NNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
:.. ..:: . .. . . : .: .. . :. ..:. : . . :
CCDS90 NQLEKFDIKSFCKILGPLSYSKIKHLRLDGNRISETSLPPDMYECLRVANEVTLN
290 300 310 320 330
>>CCDS56578.1 ECM2 gene_id:1842|Hs108|chr9 (643 aa)
initn: 396 init1: 304 opt: 454 Z-score: 460.9 bits: 94.7 E(32554): 2.4e-19
Smith-Waterman score: 454; 31.6% identity (63.5% similar) in 285 aa overlap (30-308:268-551)
10 20 30 40 50
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFE-PSLGPV-CPFR
:: . : ..:. . : : . :
CCDS56 LAHQQQRQGREEEEDEEEEGEEGEEDEEDEEDPVRGDMFRMPSRSPLPAPPRGTLRLPSG
240 250 260 270 280 290
60 70 80 90 100 110
pF1KB6 CQCHLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKI
:. :...: . : ..: :. : :.: .:.:. : : :..: ::. : : .:.:
CCDS56 CSLSYRTISCINAMLTQIPPLTAPQITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNI
300 310 320 330 340 350
120 130 140 150 160 170
pF1KB6 --SKVSPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQ
: ..: :: : :: :: .. :.: ..: ..:.::.::...::.. . . ... :::
CCDS56 TSSGIGPKAFKLLKKLMRLNMDGNNLIQIPSQLPSTLEELKVNENNLQAIDEESLSDLNQ
360 370 380 390 400 410
180 190 200 210 220 230
pF1KB6 MIVIELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISR
....:: : :. .... ::. .:.:.:.:.. ... :::::: :. ::.:..:.: .
CCDS56 LVTLELEGNNLSEANVNPLAFKPLKSLAYLRLGKNKFRIIPQGLPGSIEELYLENNQIEE
420 430 440 450 460 470
240 250 260 270 280 290
pF1KB6 VDAASLKGLNNLAKLGLSFNSISAVDNGSLA--NTPHLRELHLDNNKLTRVPGGLAEHKY
. .. .. . : .:.: . :: : .:. . :. ::: .::. : . .
CCDS56 ITEICFNHTRKINVIVLRYNKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPK-SL
480 490 500 510 520 530
300 310 320 330 340 350
pF1KB6 IQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAI
...: : :. . :
CCDS56 LHLVLLGNQIERIPGYVFGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLRELFLDHN
540 550 560 570 580 590
>>CCDS6698.1 ECM2 gene_id:1842|Hs108|chr9 (699 aa)
initn: 392 init1: 304 opt: 454 Z-score: 460.4 bits: 94.7 E(32554): 2.5e-19
Smith-Waterman score: 454; 31.6% identity (63.5% similar) in 285 aa overlap (30-308:290-573)
10 20 30 40 50
pF1KB6 MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFE-PSLGPV-CPFR
:: . : ..:. . : : . :
CCDS66 LAHQQQRQGREEEEDEEEEGEEGEEDEEDEEDPVRGDMFRMPSRSPLPAPPRGTLRLPSG
260 270 280 290 300 310
60 70 80 90 100 110
pF1KB6 CQCHLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKI
:. :...: . : ..: :. : :.: .:.:. : : :..: ::. : : .:.:
CCDS66 CSLSYRTISCINAMLTQIPPLTAPQITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNI
320 330 340 350 360 370
120 130 140 150 160 170
pF1KB6 --SKVSPGAFTPLVKLERLYLSKNQLKELPEKMPKTLQELRAHENEITKVRKVTFNGLNQ
: ..: :: : :: :: .. :.: ..: ..:.::.::...::.. . . ... :::
CCDS66 TSSGIGPKAFKLLKKLMRLNMDGNNLIQIPSQLPSTLEELKVNENNLQAIDEESLSDLNQ
380 390 400 410 420 430
180 190 200 210 220 230
pF1KB6 MIVIELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLDGNKISR
....:: : :. .... ::. .:.:.:.:.. ... :::::: :. ::.:..:.: .
CCDS66 LVTLELEGNNLSEANVNPLAFKPLKSLAYLRLGKNKFRIIPQGLPGSIEELYLENNQIEE
440 450 460 470 480 490
240 250 260 270 280 290
pF1KB6 VDAASLKGLNNLAKLGLSFNSISAVDNGSLA--NTPHLRELHLDNNKLTRVPGGLAEHKY
. .. .. . : .:.: . :: : .:. . :. ::: .::. : . .
CCDS66 ITEICFNHTRKINVIVLRYNKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPK-SL
500 510 520 530 540 550
300 310 320 330 340 350
pF1KB6 IQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAI
...: : :. . :
CCDS66 LHLVLLGNQIERIPGYVFGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLRELFLDHN
560 570 580 590 600 610
359 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:11:23 2016 done: Fri Nov 4 23:11:23 2016
Total Scan time: 2.120 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]