Result of FASTA (omim) for
pF1KB6510
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6510, 384 aa
1>>>pF1KB6510 384 - 384 aa - 384 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3214+/-0.000317; mu= 16.8593+/- 0.020
mean_var=66.4015+/-13.375, 0's: 0 Z-trim(115.6): 27 B-trim: 1565 in 1/51
Lambda= 0.157393
statistics sampled from 26202 (26229) to 26202 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.308), width: 16
Scan time: 8.810
The best scores are: opt bits E(85289)
NP_950245 (OMIM: 615394) 5-methylcytosine rRNA met ( 384) 2594 597.7 1.5e-170
NP_001243056 (OMIM: 615394) 5-methylcytosine rRNA ( 335) 2274 525.0 9.9e-149
NP_001243057 (OMIM: 615394) 5-methylcytosine rRNA ( 335) 2274 525.0 9.9e-149
NP_001245239 (OMIM: 164031) probable 28S rRNA (cyt ( 628) 262 68.3 5.7e-11
NP_006161 (OMIM: 164031) probable 28S rRNA (cytosi ( 808) 262 68.4 7e-11
NP_001028886 (OMIM: 164031) probable 28S rRNA (cyt ( 808) 262 68.4 7e-11
XP_005253748 (OMIM: 164031) PREDICTED: probable 28 ( 812) 262 68.4 7.1e-11
NP_001245237 (OMIM: 164031) probable 28S rRNA (cyt ( 812) 262 68.4 7.1e-11
NP_001245238 (OMIM: 164031) probable 28S rRNA (cyt ( 845) 262 68.4 7.3e-11
NP_001180384 (OMIM: 610916,611091) tRNA (cytosine( ( 732) 232 61.5 7.3e-09
NP_060225 (OMIM: 610916,611091) tRNA (cytosine(34) ( 767) 232 61.5 7.6e-09
NP_001161820 (OMIM: 615732) probable 28S rRNA (cyt ( 391) 178 49.1 2.1e-05
NP_060514 (OMIM: 615732) probable 28S rRNA (cytosi ( 429) 178 49.1 2.3e-05
NP_683759 (OMIM: 615732) probable 28S rRNA (cytosi ( 466) 178 49.1 2.4e-05
NP_001161819 (OMIM: 615732) probable 28S rRNA (cyt ( 470) 178 49.2 2.5e-05
>>NP_950245 (OMIM: 615394) 5-methylcytosine rRNA methylt (384 aa)
initn: 2594 init1: 2594 opt: 2594 Z-score: 3183.0 bits: 597.7 E(85289): 1.5e-170
Smith-Waterman score: 2594; 100.0% identity (100.0% similar) in 384 aa overlap (1-384:1-384)
10 20 30 40 50 60
pF1KB6 MAALTLRGVRELLKRVDLATVPRRHRYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 MAALTLRGVRELLKRVDLATVPRRHRYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PSIRVSLLSEQKYGALVNNFAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 PSIRVSLLSEQKYGALVNNFAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ASWACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 ASWACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 CAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 WGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 WGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_950 PGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQV
310 320 330 340 350 360
370 380
pF1KB6 GELVIPNLMANFGPMYFCKMRRLT
::::::::::::::::::::::::
NP_950 GELVIPNLMANFGPMYFCKMRRLT
370 380
>>NP_001243056 (OMIM: 615394) 5-methylcytosine rRNA meth (335 aa)
initn: 2274 init1: 2274 opt: 2274 Z-score: 2791.2 bits: 525.0 E(85289): 9.9e-149
Smith-Waterman score: 2274; 100.0% identity (100.0% similar) in 335 aa overlap (50-384:1-335)
20 30 40 50 60 70
pF1KB6 TVPRRHRYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNN
::::::::::::::::::::::::::::::
NP_001 MTYSVQFGDLWPSIRVSLLSEQKYGALVNN
10 20 30
80 90 100 110 120 130
pF1KB6 FAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCT
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 VVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCK
280 290 300 310 320 330
380
pF1KB6 MRRLT
:::::
NP_001 MRRLT
>>NP_001243057 (OMIM: 615394) 5-methylcytosine rRNA meth (335 aa)
initn: 2274 init1: 2274 opt: 2274 Z-score: 2791.2 bits: 525.0 E(85289): 9.9e-149
Smith-Waterman score: 2274; 100.0% identity (100.0% similar) in 335 aa overlap (50-384:1-335)
20 30 40 50 60 70
pF1KB6 TVPRRHRYKKKWAATEPKFPAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNN
::::::::::::::::::::::::::::::
NP_001 MTYSVQFGDLWPSIRVSLLSEQKYGALVNN
10 20 30
80 90 100 110 120 130
pF1KB6 FAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAAWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCT
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 VVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCK
280 290 300 310 320 330
380
pF1KB6 MRRLT
:::::
NP_001 MRRLT
>>NP_001245239 (OMIM: 164031) probable 28S rRNA (cytosin (628 aa)
initn: 274 init1: 131 opt: 262 Z-score: 318.0 bits: 68.3 E(85289): 5.7e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:362-529)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
NP_001 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
340 350 360 370 380 390
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
NP_001 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
400 410 420 430 440
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
NP_001 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
450 460 470 480 490
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
NP_001 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
500 510 520 530 540 550
>>NP_006161 (OMIM: 164031) probable 28S rRNA (cytosine(4 (808 aa)
initn: 274 init1: 131 opt: 262 Z-score: 316.3 bits: 68.4 E(85289): 7e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:362-529)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
NP_006 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
340 350 360 370 380 390
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
NP_006 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
400 410 420 430 440
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
NP_006 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
450 460 470 480 490
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
NP_006 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
500 510 520 530 540 550
>>NP_001028886 (OMIM: 164031) probable 28S rRNA (cytosin (808 aa)
initn: 274 init1: 131 opt: 262 Z-score: 316.3 bits: 68.4 E(85289): 7e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:362-529)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
NP_001 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
340 350 360 370 380 390
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
NP_001 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
400 410 420 430 440
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
NP_001 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
450 460 470 480 490
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
NP_001 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
500 510 520 530 540 550
>>XP_005253748 (OMIM: 164031) PREDICTED: probable 28S rR (812 aa)
initn: 274 init1: 131 opt: 262 Z-score: 316.3 bits: 68.4 E(85289): 7.1e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:366-533)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
XP_005 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
340 350 360 370 380 390
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
XP_005 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
400 410 420 430 440
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
XP_005 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
450 460 470 480 490 500
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
XP_005 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
510 520 530 540 550 560
>>NP_001245237 (OMIM: 164031) probable 28S rRNA (cytosin (812 aa)
initn: 274 init1: 131 opt: 262 Z-score: 316.3 bits: 68.4 E(85289): 7.1e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:366-533)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
NP_001 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
340 350 360 370 380 390
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
NP_001 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
400 410 420 430 440
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
NP_001 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
450 460 470 480 490 500
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
NP_001 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
510 520 530 540 550 560
>>NP_001245238 (OMIM: 164031) probable 28S rRNA (cytosin (845 aa)
initn: 270 init1: 131 opt: 262 Z-score: 316.0 bits: 68.4 E(85289): 7.3e-11
Smith-Waterman score: 274; 33.3% identity (62.8% similar) in 180 aa overlap (155-326:399-566)
130 140 150 160 170 180
pF1KB6 CSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAP
:.:. :.:.:::.::. : . .::.: ::
NP_001 DPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAP
370 380 390 400 410 420
190 200 210 220 230 240
pF1KB6 GGKTLALLQTGCCRNLA-ANDLSPSRIARLQKILHSYVPEEIRDG-NQVRVTSWDGRKWG
:::: . : .. ::: . :. . :: : : ... .. .:::..
NP_001 GGKTSYMAQLMKNTGVILANDANAERLKSVVGNLH-------RLGVTNTIISHYDGRQFP
430 440 450 460 470 480
250 260 270 280 290
pF1KB6 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV--LQVQLLAAGL----
.. : .::::.:.::. .. .. . .. : :..:: :: .:: ...
NP_001 KVVGG-FDRVLLDAPCSGT--GVISKDPAV--KTNKDEKDILRCAHLQKELLLSAIDSVN
490 500 510 520 530
300 310 320 330 340 350
pF1KB6 LATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFS
..: ::..:: :::.. .::.::. :..
NP_001 ATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSL
540 550 560 570 580 590
>>NP_001180384 (OMIM: 610916,611091) tRNA (cytosine(34)- (732 aa)
initn: 219 init1: 97 opt: 232 Z-score: 280.1 bits: 61.5 E(85289): 7.3e-09
Smith-Waterman score: 232; 30.8% identity (58.8% similar) in 182 aa overlap (159-326:127-302)
130 140 150 160 170 180
pF1KB6 LRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKT
.:.:..: : :...: .::.:::::.::
NP_001 SRKILRKSPHLEKFHQFLVSETESGNISRQEAVSMIPPLLLNVRPHHKILDMCAAPGSKT
100 110 120 130 140 150
190 200 210 220 230
pF1KB6 LALLQTGCCRN--------LAANDLSPSR---IARLQKILHSYVPEEI-RDGNQV-RVT-
:.. . :::.. .: ... : : : . .:.... :.
NP_001 TQLIEMLHADMNVPFPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQI
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 SWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAA
. :::: : :::.: ::::. : . ... ...:. . : ::... .
NP_001 DVDGRK----EILFYDRILCDVPCSGD--GTMRKNIDVWKKWTTLNSLQLHGLQLRIATR
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 GLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCF
: ::..:::::::. ...: :. . .:
NP_001 GAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEGALELADVSNELPGLKWMPGITQWK
280 290 300 310 320 330
360 370 380
pF1KB6 FSSCQVGELVIPNLMANFGPMYFCKMRRLT
NP_001 VMTKDGQWFTDWDAVPHSRHTQIRPTMFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVA
340 350 360 370 380 390
384 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:17:32 2016 done: Fri Nov 4 16:17:33 2016
Total Scan time: 8.810 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]