Result of FASTA (omim) for
pF1KB6585
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6585, 377 aa
1>>>pF1KB6585 377 - 377 aa - 377 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3558+/-0.000448; mu= 16.2559+/- 0.028
mean_var=62.2156+/-12.193, 0's: 0 Z-trim(109.9): 36 B-trim: 524 in 1/48
Lambda= 0.162602
statistics sampled from 18149 (18185) to 18149 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.579), E-opt: 0.2 (0.213), width: 16
Scan time: 6.570
The best scores are: opt bits E(85289)
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 2514 598.7 7.4e-171
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 2514 598.7 7.4e-171
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 2514 598.7 7.4e-171
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 2483 591.4 1.1e-168
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 2480 590.7 1.9e-168
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 2475 589.5 4.2e-168
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 2383 567.9 1.3e-161
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 2383 567.9 1.3e-161
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 2382 567.7 1.5e-161
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 2278 543.3 3.4e-154
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 2220 529.8 6.9e-150
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 2220 529.9 9.6e-150
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 2220 529.9 9.7e-150
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 2220 529.9 1.1e-149
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 2220 529.9 1.1e-149
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 1908 456.5 4.1e-128
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 1443 347.4 3.2e-95
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 1421 342.3 1.1e-93
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 1307 315.5 1.3e-85
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 1289 311.3 2.1e-84
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 1249 301.9 1.6e-81
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 1235 298.6 1.5e-80
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 1197 289.7 6.1e-78
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 1111 269.6 1e-71
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 1101 267.2 4.7e-71
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 1089 264.4 3.3e-70
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 1073 260.6 4.6e-69
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 575 143.8 6.8e-34
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 506 127.6 4.6e-29
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 439 111.9 2.8e-24
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 363 94.1 6e-19
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 363 94.1 6e-19
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 363 94.1 6.5e-19
>>NP_001604 (OMIM: 102620,611788,613834,614042) actin, a (377 aa)
initn: 2514 init1: 2514 opt: 2514 Z-score: 3188.4 bits: 598.7 E(85289): 7.4e-171
Smith-Waterman score: 2514; 100.0% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001307784 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2514 init1: 2514 opt: 2514 Z-score: 3188.4 bits: 598.7 E(85289): 7.4e-171
Smith-Waterman score: 2514; 100.0% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2514 init1: 2514 opt: 2514 Z-score: 3188.4 bits: 598.7 E(85289): 7.4e-171
Smith-Waterman score: 2514; 100.0% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 2471 init1: 2471 opt: 2483 Z-score: 3149.1 bits: 591.4 E(85289): 1.1e-168
Smith-Waterman score: 2483; 99.2% identity (99.5% similar) in 377 aa overlap (1-377:1-376)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::::: .:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
: :::::::::::::::
NP_001 KPEYDEAGPSIVHRKCF
360 370
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 2480 init1: 2480 opt: 2480 Z-score: 3145.3 bits: 590.7 E(85289): 1.9e-168
Smith-Waterman score: 2480; 98.4% identity (99.7% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::..:..::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_005 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_005 KQEYDEAGPSIVHRKCF
370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 3139.0 bits: 589.5 E(85289): 4.2e-168
Smith-Waterman score: 2475; 97.9% identity (99.7% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::.:...::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 2383 init1: 2383 opt: 2383 Z-score: 3022.4 bits: 567.9 E(85289): 1.3e-161
Smith-Waterman score: 2383; 94.4% identity (99.2% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::. .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 2383 init1: 2383 opt: 2383 Z-score: 3022.4 bits: 567.9 E(85289): 1.3e-161
Smith-Waterman score: 2383; 94.4% identity (99.2% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::. .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 2382 init1: 2382 opt: 2382 Z-score: 3021.1 bits: 567.7 E(85289): 1.5e-161
Smith-Waterman score: 2382; 94.1% identity (99.2% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
..: .::: :::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::.:::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001017992 (OMIM: 614835) beta-actin-like protein 2 (376 aa)
initn: 2278 init1: 2278 opt: 2278 Z-score: 2889.2 bits: 543.3 E(85289): 3.4e-154
Smith-Waterman score: 2278; 88.0% identity (97.3% similar) in 374 aa overlap (4-377:3-376)
10 20 30 40 50 60
pF1KB6 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
... .::: :::::.:::::.:::::::::::..:::::::::::::::: ::::::
NP_001 MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::.::::::::::..::::::::::.:.:::::::::.::: :::::::::: ::::
NP_001 QSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
:::::::.::.:::::::::::::::::::::::.:::::::: :::::::::::::.::
NP_001 MTQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::.:.::::::::::.::::::::::::.::. ::.::: :.
NP_001 DLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::..:::::.:.::.::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
::::.:::::::::::::: .:::::::::::::::::::::::::::::::::::::::
NP_001 LSGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::::: :::::::
NP_001 KQEYDEAGPPIVHRKCF
360 370
377 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:22:15 2016 done: Fri Nov 4 23:22:16 2016
Total Scan time: 6.570 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]