Result of FASTA (ccds) for
pF1KB6595
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6595, 380 aa
1>>>pF1KB6595 380 - 380 aa - 380 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2013+/-0.000961; mu= 17.2010+/- 0.058
mean_var=72.7784+/-14.969, 0's: 0 Z-trim(105.5): 57 B-trim: 17 in 3/48
Lambda= 0.150339
statistics sampled from 8420 (8478) to 8420 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.26), width: 16
Scan time: 1.970
The best scores are: opt bits E(32554)
CCDS14565.1 IL13RA2 gene_id:3598|Hs108|chrX ( 380) 2675 589.7 1.5e-168
CCDS2559.1 IL5RA gene_id:3568|Hs108|chr3 ( 420) 369 89.5 5.7e-18
CCDS58813.1 IL5RA gene_id:3568|Hs108|chr3 ( 378) 368 89.3 6.2e-18
CCDS46739.1 IL5RA gene_id:3568|Hs108|chr3 ( 333) 344 84.1 2.1e-16
CCDS2560.1 IL5RA gene_id:3568|Hs108|chr3 ( 335) 344 84.1 2.1e-16
CCDS14573.1 IL13RA1 gene_id:3597|Hs108|chrX ( 427) 328 80.7 2.8e-15
CCDS14406.1 IL2RG gene_id:3561|Hs108|chrX ( 369) 316 78.0 1.5e-14
>>CCDS14565.1 IL13RA2 gene_id:3598|Hs108|chrX (380 aa)
initn: 2675 init1: 2675 opt: 2675 Z-score: 3139.7 bits: 589.7 E(32554): 1.5e-168
Smith-Waterman score: 2675; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380)
10 20 30 40 50 60
pF1KB6 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSWAETTYWISPQGIPETKVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SSWAETTYWISPQGIPETKVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENETYTLKTTNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENETYTLKTTNE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 TRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWLPFGFILILVIFVTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWLPFGFILILVIFVTG
310 320 330 340 350 360
370 380
pF1KB6 LLLRKPNTYPKMIPEFFCDT
::::::::::::::::::::
CCDS14 LLLRKPNTYPKMIPEFFCDT
370 380
>>CCDS2559.1 IL5RA gene_id:3568|Hs108|chr3 (420 aa)
initn: 196 init1: 146 opt: 369 Z-score: 436.0 bits: 89.5 E(32554): 5.7e-18
Smith-Waterman score: 422; 27.2% identity (56.9% similar) in 364 aa overlap (27-374:25-373)
10 20 30 40 50 60
pF1KB6 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
: .:.. :: .: : : :. . :::.: . .
CCDS25 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG-LAQVLLQWKPNPDQE
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
. .. ..::..: . ..: ::.. : :.::. :...:.: .. : .
CCDS25 Q-RNVNLEYQVKINAPKEDDYETRITES---KCVTILHKGFSASVRTILQ---NDHSLLA
60 70 80 90 100 110
130 140 150 160
pF1KB6 SSWAETTYWISPQGIPETKVQDMDCV----------YYNWQYLL-CSWKPGIGVLLDTNY
:::: .. .: : : :.. .. :. ..: : :.: : . ::.:
CCDS25 SSWA-SAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQY
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 NLFYWYEGLDHALQCVDYIKAD-GQNIGCRFPYLEA-SDYKDFY-ICVNGSSENKPIRSS
:.: : . . .: .: : :.::.: :: : .:. . :::::... ::
CCDS25 FLYYRYGSWTE--ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTA
: :. : . ::. .: :.. .....: :.. .: .:::::..:.. . .
CCDS25 DQLFALHAIDQINPPLNVTAEIEGT-RLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 TVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL
. .. .. . ::. :. .: . :.::::: . . :.: : :: :.
CCDS25 EKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWSEWS-QPIYVGNDEHKP--LREWF
290 300 310 320 330 340
350 360 370 380
pF1KB6 PFGFI--LILVIFVTGLLLRKPNTYPKMIPEFFCDT
. .. . ..... .:. . . . :..:
CCDS25 VIVIMATICFILLILSLICKICHLWIKLFPPIPAPKSNIKDLFVTTNYEKAGSSETEIEV
350 360 370 380 390 400
>>CCDS58813.1 IL5RA gene_id:3568|Hs108|chr3 (378 aa)
initn: 231 init1: 146 opt: 368 Z-score: 435.5 bits: 89.3 E(32554): 6.2e-18
Smith-Waterman score: 421; 28.2% identity (56.1% similar) in 351 aa overlap (27-363:25-356)
10 20 30 40 50 60
pF1KB6 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
: .:.. :: .: : : :. . :::.: . .
CCDS58 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG-LAQVLLQWKPNPDQE
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
. .. ..::..: . ..: ::.. : :.::. :...:.: .. : .
CCDS58 Q-RNVNLEYQVKINAPKEDDYETRITES---KCVTILHKGFSASVRTILQ---NDHSLLA
60 70 80 90 100 110
130 140 150 160
pF1KB6 SSWAETTYWISPQGIPETKVQDMDCV----------YYNWQYLL-CSWKPGIGVLLDTNY
:::: .. .: : : :.. .. :. ..: : :.: : . ::.:
CCDS58 SSWA-SAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQY
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 NLFYWYEGLDHALQCVDYIKAD-GQNIGCRFPYLEA-SDYKDFY-ICVNGSSENKPIRSS
:.: : . . .: .: : :.::.: :: : .:. . :::::... ::
CCDS58 FLYYRYGSWTE--ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTA
: :. : . ::. .: :.. .....: :.. .: .:::::..:.. . .
CCDS58 DQLFALHAIDQINPPLNVTAEIEGT-RLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 TVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL
. .. .. . ::. :. .: . :.::::: . . :.: : :: :
CCDS58 EKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWSEWS-QPIYVGNDEHKP--LREW-
290 300 310 320 330 340
350 360 370 380
pF1KB6 PFGFILILVIFVTGLLLRKPNTYPKMIPEFFCDT
:..... . .::
CCDS58 ---FVIVIMATICFILLILSLICKIKLGPVRRKLKSSVI
350 360 370
>>CCDS46739.1 IL5RA gene_id:3568|Hs108|chr3 (333 aa)
initn: 231 init1: 146 opt: 344 Z-score: 408.1 bits: 84.1 E(32554): 2.1e-16
Smith-Waterman score: 397; 28.7% identity (56.7% similar) in 314 aa overlap (27-326:25-326)
10 20 30 40 50 60
pF1KB6 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
: .:.. :: .: : : :. . :::.: . .
CCDS46 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG-LAQVLLQWKPNPDQE
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
. .. ..::..: . ..: ::.. : :.::. :...:.: .. : .
CCDS46 Q-RNVNLEYQVKINAPKEDDYETRITES---KCVTILHKGFSASVRTILQ---NDHSLLA
60 70 80 90 100 110
130 140 150 160
pF1KB6 SSWAETTYWISPQGIPETKVQDMDCV----------YYNWQYLL-CSWKPGIGVLLDTNY
:::: .. .: : : :.. .. :. ..: : :.: : . ::.:
CCDS46 SSWA-SAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQY
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 NLFYWYEGLDHALQCVDYIKAD-GQNIGCRFPYLEA-SDYKDFY-ICVNGSSENKPIRSS
:.: : . . .: .: : :.::.: :: : .:. . :::::... ::
CCDS46 FLYYRYGSWTE--ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTA
: :. : . ::. .: :.. .....: :.. .: .:::::..:.. . .
CCDS46 DQLFALHAIDQINPPLNVTAEIEGT-RLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 TVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL
. .. .. . ::. :. .: . :.:::::
CCDS46 EKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGK
290 300 310 320 330
350 360 370 380
pF1KB6 PFGFILILVIFVTGLLLRKPNTYPKMIPEFFCDT
>>CCDS2560.1 IL5RA gene_id:3568|Hs108|chr3 (335 aa)
initn: 231 init1: 146 opt: 344 Z-score: 408.1 bits: 84.1 E(32554): 2.1e-16
Smith-Waterman score: 397; 28.7% identity (56.7% similar) in 314 aa overlap (27-326:25-326)
10 20 30 40 50 60
pF1KB6 MAFVCLAIGCLYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLD
: .:.. :: .: : : :. . :::.: . .
CCDS25 MIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG-LAQVLLQWKPNPDQE
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 HFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSEVQ
. .. ..::..: . ..: ::.. : :.::. :...:.: .. : .
CCDS25 Q-RNVNLEYQVKINAPKEDDYETRITES---KCVTILHKGFSASVRTILQ---NDHSLLA
60 70 80 90 100 110
130 140 150 160
pF1KB6 SSWAETTYWISPQGIPETKVQDMDCV----------YYNWQYLL-CSWKPGIGVLLDTNY
:::: .. .: : : :.. .. :. ..: : :.: : . ::.:
CCDS25 SSWA-SAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQY
120 130 140 150 160
170 180 190 200 210 220
pF1KB6 NLFYWYEGLDHALQCVDYIKAD-GQNIGCRFPYLEA-SDYKDFY-ICVNGSSENKPIRSS
:.: : . . .: .: : :.::.: :: : .:. . :::::... ::
CCDS25 FLYYRYGSWTE--ECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB6 YFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTA
: :. : . ::. .: :.. .....: :.. .: .:::::..:.. . .
CCDS25 DQLFALHAIDQINPPLNVTAEIEGT-RLSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 TVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL
. .. .. . ::. :. .: . :.:::::
CCDS25 EKLMTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYVGFSR
290 300 310 320 330
350 360 370 380
pF1KB6 PFGFILILVIFVTGLLLRKPNTYPKMIPEFFCDT
>>CCDS14573.1 IL13RA1 gene_id:3597|Hs108|chrX (427 aa)
initn: 326 init1: 202 opt: 328 Z-score: 387.9 bits: 80.7 E(32554): 2.8e-15
Smith-Waterman score: 399; 26.1% identity (55.6% similar) in 403 aa overlap (10-379:8-391)
10 20 30 40 50
pF1KB6 MAFVCLAIGC-LYTFLISTTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSL
: :...:. . : ... . ...:: :. : . :.:: .
CCDS14 MEWPARLCGLWALLLCAGGGGGGGGAAPTETQPPVTNLSVSVENLCTVIWTWNPPEGA
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DHFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAKIHTLLPWQC-TNGSE
. ..:.. : . ..:.. : : .. . . ::. : .. . :: :: ::
CCDS14 S--SNCSLWY---FSHFGDKQDKKIAPETRRSIE-VPLNERICLQVGS----QCSTNESE
60 70 80 90 100
120 130 140 150 160 170
pF1KB6 VQSSWAETTYWISP-QGIPETKVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEG
: .: ::: .: ::. : ...:...: .:. ::: :: .. ::::.:.::...
CCDS14 KPSILVEKC--ISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 LDHALQCVDYIKADGQNIGCRFPYLEASD--YKDFYICVNGSSENKPIRSSYFTFQLQNI
:.. :: . .. .:: .:: : ...: ... . . ... :. :. : .
CCDS14 LEKIHQCENIFR-EGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSR
170 180 190 200 210 220
240 250 260 270 280
pF1KB6 VKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTT------LVTATVE
::: :: ... ... .. ..: : . : .::. ::.:. ...: . : :
CCDS14 VKPDPPHIKNLSFHND-DLYVQWENPQNFI-SRCLFYEVEVNNSQTETHNVFYVQEAKCE
230 240 250 260 270 280
290 300 310 320 330
pF1KB6 NETYTLKTTNETRQLCFVV-------------RSKVNIYC-SDDGIWSEWSDKQCWEGED
: . .. : . ::.: : :.: : :: .::.::... :.
CCDS14 NPEFERNVENTS---CFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSI-GKK
290 300 310 320 330
340 350 360 370 380
pF1KB6 LSKKTLLRFWL--PF---GFILILVIFVTGL--LLRKPNTYP-KMIPEFFCDT
.. . . : : : :..:.... : .. : : :.. :.: :
CCDS14 RNSTLYITMLLIVPVIVAGAIIVLLLYLKRLKIIIFPPIPDPGKIFKEMFGDQNDDTLHW
340 350 360 370 380 390
CCDS14 KKYDIYEKQTKEETDSVVLIENLKKASQ
400 410 420
>>CCDS14406.1 IL2RG gene_id:3561|Hs108|chrX (369 aa)
initn: 189 init1: 97 opt: 316 Z-score: 374.7 bits: 78.0 E(32554): 1.5e-14
Smith-Waterman score: 316; 25.9% identity (56.6% similar) in 251 aa overlap (115-360:31-268)
90 100 110 120 130 140
pF1KB6 ITKNLHYKDGFDLNKGIEAKIHTLLPWQCTNGSE-VQSSWAETTYWISPQGIPETKVQDM
::.: . ... ::. . .. . ..
CCDS14 MLKPSLPFTSLLFLQLPLLGVGLNTTILTPNGNEDTTADFFLTTMPTDSLSVSTLPLPEV
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB6 DCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDH--ALQCVDYIKADGQNIGCRFPY
.: .: .:. :.:. . . :: .: :::.. :. . .: :. .. . ::..
CCDS14 QCFVFNVEYMNCTWNSS-SEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQK
70 80 90 100 110
210 220 230 240 250 260
pF1KB6 LEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIP
: :. : . .. : : :.. ..:::.: : : ::. . : ...:.:.
CCDS14 KEIHLYQTFVVQLQDPRE--PRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWN--
120 130 140 150 160 170
270 280 290 300 310
pF1KB6 LGPIPARCFDYEIEIRED-DTTLVTATVE-NETYTLKTTNETRQLCFVVRSKVNIYCSDD
. . .:... .. : : : . . .:. . ..: ... .. : :::. : :..
CCDS14 -NRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSA
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB6 GIWSEWSDKQCWEGEDLSKKTLLRFWLPFGFILILVIFVTGLLLRKPNTYPKMIPEFFCD
::::: : : . ::.. :: : : :.. .:
CCDS14 QHWSEWSHPIHW-GSNTSKEN------PFLFALEAVVISVGSMGLIISLLCVYFWLERTM
240 250 260 270 280
380
pF1KB6 T
CCDS14 PRIPTLKNLEDLVTEYHGNFSAWSGVSKGLAESLQPDYSERLCLVSEIPPKGGALGEGPG
290 300 310 320 330 340
380 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:13:10 2016 done: Sat Nov 5 18:13:10 2016
Total Scan time: 1.970 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]