Result of FASTA (omim) for
pF1KB6623
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6623, 413 aa
1>>>pF1KB6623 413 - 413 aa - 413 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3783+/-0.000491; mu= 0.5538+/- 0.031
mean_var=311.1574+/-63.260, 0's: 0 Z-trim(117.6): 9 B-trim: 347 in 1/54
Lambda= 0.072708
statistics sampled from 29804 (29813) to 29804 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.35), width: 16
Scan time: 7.260
The best scores are: opt bits E(85289)
NP_055856 (OMIM: 616787) clusterin-associated prot ( 413) 2654 292.1 1.7e-78
XP_016878558 (OMIM: 616787) PREDICTED: clusterin-a ( 440) 2606 287.1 5.7e-77
XP_016878561 (OMIM: 616787) PREDICTED: clusterin-a ( 402) 2581 284.5 3.3e-76
NP_001317383 (OMIM: 616787) clusterin-associated p ( 432) 2330 258.2 2.9e-68
XP_016878557 (OMIM: 616787) PREDICTED: clusterin-a ( 459) 2282 253.2 1e-66
XP_016878560 (OMIM: 616787) PREDICTED: clusterin-a ( 421) 2257 250.5 5.8e-66
XP_006720930 (OMIM: 616787) PREDICTED: clusterin-a ( 341) 2165 240.8 4e-63
XP_016878562 (OMIM: 616787) PREDICTED: clusterin-a ( 360) 1841 206.8 7.1e-53
NP_079069 (OMIM: 616787) clusterin-associated prot ( 247) 1595 180.8 3.2e-45
>>NP_055856 (OMIM: 616787) clusterin-associated protein (413 aa)
initn: 2654 init1: 2654 opt: 2654 Z-score: 1530.4 bits: 292.1 E(85289): 1.7e-78
Smith-Waterman score: 2654; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413)
10 20 30 40 50 60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
370 380 390 400 410
>>XP_016878558 (OMIM: 616787) PREDICTED: clusterin-assoc (440 aa)
initn: 2606 init1: 2606 opt: 2606 Z-score: 1502.9 bits: 287.1 E(85289): 5.7e-77
Smith-Waterman score: 2606; 99.5% identity (99.8% similar) in 408 aa overlap (6-413:33-440)
10 20 30
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLV
: .:::::::::::::::::::::::::::
XP_016 RGQNPGGSPWSLWLGSGHIKQTALANWRVLLSDFTEMMRALGYPRHISMENFRTPNFGLV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB6 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTK
370 380 390 400 410 420
400 410
pF1KB6 PNRRVRKSEPLDESDNDF
::::::::::::::::::
XP_016 PNRRVRKSEPLDESDNDF
430 440
>>XP_016878561 (OMIM: 616787) PREDICTED: clusterin-assoc (402 aa)
initn: 2581 init1: 2581 opt: 2581 Z-score: 1489.2 bits: 284.5 E(85289): 3.3e-76
Smith-Waterman score: 2581; 100.0% identity (100.0% similar) in 402 aa overlap (12-413:1-402)
10 20 30 40 50 60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
290 300 310 320 330 340
370 380 390 400 410
pF1KB6 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
350 360 370 380 390 400
>>NP_001317383 (OMIM: 616787) clusterin-associated prote (432 aa)
initn: 2399 init1: 2329 opt: 2330 Z-score: 1346.5 bits: 258.2 E(85289): 2.9e-68
Smith-Waterman score: 2606; 95.6% identity (95.6% similar) in 432 aa overlap (1-413:1-432)
10 20 30 40 50 60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
310 320 330 340 350 360
370 380 390 400
pF1KB6 SDDN-------------------EDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
:::: :::::::::::::::::::::::::::::::::::::
NP_001 SDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
370 380 390 400 410 420
410
pF1KB6 KSEPLDESDNDF
::::::::::::
NP_001 KSEPLDESDNDF
430
>>XP_016878557 (OMIM: 616787) PREDICTED: clusterin-assoc (459 aa)
initn: 2345 init1: 2275 opt: 2282 Z-score: 1319.0 bits: 253.2 E(85289): 1e-66
Smith-Waterman score: 2558; 95.1% identity (95.3% similar) in 427 aa overlap (6-413:33-459)
10 20 30
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLV
: .:::::::::::::::::::::::::::
XP_016 RGQNPGGSPWSLWLGSGHIKQTALANWRVLLSDFTEMMRALGYPRHISMENFRTPNFGLV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEVLLWLVKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELLKITSVLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLY
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEA
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLED
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPK
310 320 330 340 350 360
340 350 360 370
pF1KB6 PQTAMEMLMQGRPGKRIVGTMQGGDSDDN-------------------EDSEESEIDMED
::::::::::::::::::::::::::::: ::::::::::::
XP_016 PQTAMEMLMQGRPGKRIVGTMQGGDSDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMED
370 380 390 400 410 420
380 390 400 410
pF1KB6 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
:::::::::::::::::::::::::::::::::::::
XP_016 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
430 440 450
>>XP_016878560 (OMIM: 616787) PREDICTED: clusterin-assoc (421 aa)
initn: 2326 init1: 2256 opt: 2257 Z-score: 1305.3 bits: 250.5 E(85289): 5.8e-66
Smith-Waterman score: 2533; 95.5% identity (95.5% similar) in 421 aa overlap (12-413:1-421)
10 20 30 40 50 60
pF1KB6 MSFRDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPPDVDTEQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEIVE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPC
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB6 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGD
290 300 310 320 330 340
370 380 390 400
pF1KB6 SDDN-------------------EDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
:::: :::::::::::::::::::::::::::::::::::::
XP_016 SDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVR
350 360 370 380 390 400
410
pF1KB6 KSEPLDESDNDF
::::::::::::
XP_016 KSEPLDESDNDF
410 420
>>XP_006720930 (OMIM: 616787) PREDICTED: clusterin-assoc (341 aa)
initn: 2165 init1: 2165 opt: 2165 Z-score: 1254.2 bits: 240.8 E(85289): 4e-63
Smith-Waterman score: 2165; 100.0% identity (100.0% similar) in 341 aa overlap (73-413:1-341)
50 60 70 80 90 100
pF1KB6 VKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITS
::::::::::::::::::::::::::::::
XP_006 MATKAHIKLNTKKLYQADGYAVKELLKITS
10 20 30
110 120 130 140 150 160
pF1KB6 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB6 LMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMEDDDDEDDDLEDESISLSPTKPNRRVRK
280 290 300 310 320 330
410
pF1KB6 SEPLDESDNDF
:::::::::::
XP_006 SEPLDESDNDF
340
>>XP_016878562 (OMIM: 616787) PREDICTED: clusterin-assoc (360 aa)
initn: 1910 init1: 1840 opt: 1841 Z-score: 1070.3 bits: 206.8 E(85289): 7.1e-53
Smith-Waterman score: 2117; 94.7% identity (94.7% similar) in 360 aa overlap (73-413:1-360)
50 60 70 80 90 100
pF1KB6 VKRYEPQTDIPPDVDTEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITS
::::::::::::::::::::::::::::::
XP_016 MATKAHIKLNTKKLYQADGYAVKELLKITS
10 20 30
110 120 130 140 150 160
pF1KB6 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLYNAMKTKGMEGSEIVEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELREMRTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELERNRKRLETLQSVRPCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQE
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM
220 230 240 250 260 270
350 360 370 380
pF1KB6 LMQGRPGKRIVGTMQGGDSDDN-------------------EDSEESEIDMEDDDDEDDD
:::::::::::::::::::::: :::::::::::::::::::
XP_016 LMQGRPGKRIVGTMQGGDSDDNMEAAPALLGKCKTSSSKKQEDSEESEIDMEDDDDEDDD
280 290 300 310 320 330
390 400 410
pF1KB6 LEDESISLSPTKPNRRVRKSEPLDESDNDF
::::::::::::::::::::::::::::::
XP_016 LEDESISLSPTKPNRRVRKSEPLDESDNDF
340 350 360
>>NP_079069 (OMIM: 616787) clusterin-associated protein (247 aa)
initn: 1595 init1: 1595 opt: 1595 Z-score: 932.8 bits: 180.8 E(85289): 3.2e-45
Smith-Waterman score: 1595; 100.0% identity (100.0% similar) in 247 aa overlap (167-413:1-247)
140 150 160 170 180 190
pF1KB6 LKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEINETEKVMRIAIKEILTQV
::::::::::::::::::::::::::::::
NP_079 MRTEAIARPLEINETEKVMRIAIKEILTQV
10 20 30
200 210 220 230 240 250
pF1KB6 QKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 QKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVRPCFMDEYEKTEEELQKQY
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB6 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKLKEEEKRLLKSGSNDDSDI
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB6 DIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 DIQEDDESDSELEERRLPKPQTAMEMLMQGRPGKRIVGTMQGGDSDDNEDSEESEIDMED
160 170 180 190 200 210
380 390 400 410
pF1KB6 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
:::::::::::::::::::::::::::::::::::::
NP_079 DDDEDDDLEDESISLSPTKPNRRVRKSEPLDESDNDF
220 230 240
413 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:09:21 2016 done: Sat Nov 5 11:09:22 2016
Total Scan time: 7.260 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]