Result of FASTA (omim) for
pF1KB6624
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6624, 433 aa
1>>>pF1KB6624 433 - 433 aa - 433 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6240+/-0.000375; mu= 12.1445+/- 0.024
mean_var=142.6284+/-27.882, 0's: 0 Z-trim(118.3): 96 B-trim: 42 in 1/56
Lambda= 0.107392
statistics sampled from 31068 (31195) to 31068 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.366), width: 16
Scan time: 9.380
The best scores are: opt bits E(85289)
XP_016863747 (OMIM: 607989) PREDICTED: testican-3 ( 433) 3124 495.7 9.6e-140
NP_001035249 (OMIM: 607989) testican-3 isoform 1 p ( 433) 3124 495.7 9.6e-140
XP_016863746 (OMIM: 607989) PREDICTED: testican-3 ( 445) 3124 495.7 9.8e-140
NP_058646 (OMIM: 607989) testican-3 isoform 2 prec ( 436) 3108 493.2 5.4e-139
XP_011530320 (OMIM: 607989) PREDICTED: testican-3 ( 436) 3108 493.2 5.4e-139
NP_001191281 (OMIM: 607989) testican-3 isoform 3 [ ( 385) 2693 428.9 1.1e-119
NP_001191283 (OMIM: 607989) testican-3 isoform 5 [ ( 344) 2491 397.5 2.7e-110
NP_001191284 (OMIM: 607989) testican-3 isoform 6 [ ( 340) 2294 367.0 4.2e-101
NP_001191282 (OMIM: 607989) testican-3 isoform 4 [ ( 316) 2293 366.8 4.4e-101
NP_001191287 (OMIM: 607989) testican-3 isoform 9 p ( 313) 2216 354.9 1.7e-97
NP_001238896 (OMIM: 607989) testican-3 isoform 11 ( 338) 1983 318.8 1.3e-86
NP_004589 (OMIM: 602264) testican-1 precursor [Hom ( 439) 1662 269.2 1.5e-71
NP_001191285 (OMIM: 607989) testican-3 isoform 7 p ( 393) 1439 234.6 3.5e-61
XP_011538706 (OMIM: 607988) PREDICTED: testican-2 ( 421) 1427 232.8 1.3e-60
NP_055582 (OMIM: 607988) testican-2 isoform 2 prec ( 424) 1411 230.3 7.4e-60
NP_001231879 (OMIM: 607988) testican-2 isoform 2 p ( 424) 1411 230.3 7.4e-60
NP_001020330 (OMIM: 142790) HLA class II histocomp ( 296) 210 44.1 0.00059
XP_016865578 (OMIM: 142790) PREDICTED: HLA class I ( 321) 210 44.1 0.00063
XP_011542497 (OMIM: 131390) PREDICTED: nidogen-1 i (1205) 213 45.1 0.0012
NP_002499 (OMIM: 131390) nidogen-1 precursor [Homo (1247) 213 45.1 0.0012
XP_005267464 (OMIM: 605399) PREDICTED: nidogen-2 i (1327) 205 43.9 0.003
XP_005267463 (OMIM: 605399) PREDICTED: nidogen-2 i (1354) 205 43.9 0.003
NP_031387 (OMIM: 605399) nidogen-2 precursor [Homo (1375) 205 43.9 0.003
XP_005267462 (OMIM: 605399) PREDICTED: nidogen-2 i (1402) 205 43.9 0.0031
NP_000590 (OMIM: 146734) insulin-like growth facto ( 272) 184 40.0 0.0091
>>XP_016863747 (OMIM: 607989) PREDICTED: testican-3 isof (433 aa)
initn: 3124 init1: 3124 opt: 3124 Z-score: 2629.8 bits: 495.7 E(85289): 9.6e-140
Smith-Waterman score: 3124; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 RYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEG
370 380 390 400 410 420
430
pF1KB6 DDDDGGDDHDVYI
:::::::::::::
XP_016 DDDDGGDDHDVYI
430
>>NP_001035249 (OMIM: 607989) testican-3 isoform 1 precu (433 aa)
initn: 3124 init1: 3124 opt: 3124 Z-score: 2629.8 bits: 495.7 E(85289): 9.6e-140
Smith-Waterman score: 3124; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:1-433)
10 20 30 40 50 60
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 RYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEG
370 380 390 400 410 420
430
pF1KB6 DDDDGGDDHDVYI
:::::::::::::
NP_001 DDDDGGDDHDVYI
430
>>XP_016863746 (OMIM: 607989) PREDICTED: testican-3 isof (445 aa)
initn: 3124 init1: 3124 opt: 3124 Z-score: 2629.7 bits: 495.7 E(85289): 9.8e-140
Smith-Waterman score: 3124; 100.0% identity (100.0% similar) in 433 aa overlap (1-433:13-445)
10 20 30 40
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTI
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPPHPPLCLLSQMLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 SQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 ISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 GKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 TLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNS
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 CDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQ
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 CHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMND
370 380 390 400 410 420
410 420 430
pF1KB6 EDEIEDDDEDEGDDDDGGDDHDVYI
:::::::::::::::::::::::::
XP_016 EDEIEDDDEDEGDDDDGGDDHDVYI
430 440
>>NP_058646 (OMIM: 607989) testican-3 isoform 2 precurso (436 aa)
initn: 2695 init1: 2695 opt: 3108 Z-score: 2616.4 bits: 493.2 E(85289): 5.4e-139
Smith-Waterman score: 3108; 99.3% identity (99.3% similar) in 436 aa overlap (1-433:1-436)
10 20 30 40 50 60
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 FRD---DDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHR
::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FRDEVEDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 MKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 GHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 GHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 FDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 SNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 SNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCW
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 CVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 CVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDE
370 380 390 400 410 420
420 430
pF1KB6 DEGDDDDGGDDHDVYI
::::::::::::::::
NP_058 DEGDDDDGGDDHDVYI
430
>>XP_011530320 (OMIM: 607989) PREDICTED: testican-3 isof (436 aa)
initn: 2695 init1: 2695 opt: 3108 Z-score: 2616.4 bits: 493.2 E(85289): 5.4e-139
Smith-Waterman score: 3108; 99.3% identity (99.3% similar) in 436 aa overlap (1-433:1-436)
10 20 30 40 50 60
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 FRD---DDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHR
::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FRDEVEDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 MKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 GHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 FDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 SNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCW
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 CVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDE
370 380 390 400 410 420
420 430
pF1KB6 DEGDDDDGGDDHDVYI
::::::::::::::::
XP_011 DEGDDDDGGDDHDVYI
430
>>NP_001191281 (OMIM: 607989) testican-3 isoform 3 [Homo (385 aa)
initn: 2693 init1: 2693 opt: 2693 Z-score: 2269.6 bits: 428.9 E(85289): 1.1e-119
Smith-Waterman score: 2693; 100.0% identity (100.0% similar) in 370 aa overlap (64-433:16-385)
40 50 60 70 80 90
pF1KB6 DGGNFLDDKQWLTTISQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCS
::::::::::::::::::::::::::::::
NP_001 MITQDHIHMSSGLSQDDYFRTWSPGKPFDQALDPAKDPCLKMKCS
10 20 30 40
100 110 120 130 140 150
pF1KB6 RHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGH
50 60 70 80 90 100
160 170 180 190 200 210
pF1KB6 TYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDW
110 120 130 140 150 160
220 230 240 250 260 270
pF1KB6 FKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSI
170 180 190 200 210 220
280 290 300 310 320 330
pF1KB6 YLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQ
230 240 250 260 270 280
340 350 360 370 380 390
pF1KB6 YIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFH
290 300 310 320 330 340
400 410 420 430
pF1KB6 EWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
::::::::::::::::::::::::::::::::::::::::
NP_001 EWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
350 360 370 380
>>NP_001191283 (OMIM: 607989) testican-3 isoform 5 [Homo (344 aa)
initn: 2491 init1: 2491 opt: 2491 Z-score: 2101.1 bits: 397.5 E(85289): 2.7e-110
Smith-Waterman score: 2491; 100.0% identity (100.0% similar) in 344 aa overlap (90-433:1-344)
60 70 80 90 100 110
pF1KB6 KFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMK
::::::::::::::::::::::::::::::
NP_001 MKCSRHKVCIAQDSQTAVCISHRRLTHRMK
10 20 30
120 130 140 150 160 170
pF1KB6 EAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGH
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 CPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFD
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 TSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISN
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB6 NEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCV
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB6 DRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDE
280 290 300 310 320 330
420 430
pF1KB6 GDDDDGGDDHDVYI
::::::::::::::
NP_001 GDDDDGGDDHDVYI
340
>>NP_001191284 (OMIM: 607989) testican-3 isoform 6 [Homo (340 aa)
initn: 2294 init1: 2294 opt: 2294 Z-score: 1936.2 bits: 367.0 E(85289): 4.2e-101
Smith-Waterman score: 2294; 99.1% identity (99.7% similar) in 319 aa overlap (115-433:22-340)
90 100 110 120 130 140
pF1KB6 DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP
.. :::::::::::::::::::::::::::
NP_001 MINNGSPQSLSMTRKSDSGTNSETMKEAGVDHRQWRGPILSTCKQCPVVYP
10 20 30 40 50
150 160 170 180 190 200
pF1KB6 SPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFR
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB6 EVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLL
120 130 140 150 160 170
270 280 290 300 310 320
pF1KB6 LDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKR
180 190 200 210 220 230
330 340 350 360 370 380
pF1KB6 QGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEIS
240 250 260 270 280 290
390 400 410 420 430
pF1KB6 GDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
300 310 320 330 340
>>NP_001191282 (OMIM: 607989) testican-3 isoform 4 [Homo (316 aa)
initn: 2293 init1: 2293 opt: 2293 Z-score: 1935.7 bits: 366.8 E(85289): 4.4e-101
Smith-Waterman score: 2293; 100.0% identity (100.0% similar) in 316 aa overlap (118-433:1-316)
90 100 110 120 130 140
pF1KB6 LKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPV
::::::::::::::::::::::::::::::
NP_001 MKEAGVDHRQWRGPILSTCKQCPVVYPSPV
10 20 30
150 160 170 180 190 200
pF1KB6 CGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVA
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB6 NRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQ
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB6 SELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGV
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB6 KKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDF
220 230 240 250 260 270
390 400 410 420 430
pF1KB6 ASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI
280 290 300 310
>>NP_001191287 (OMIM: 607989) testican-3 isoform 9 precu (313 aa)
initn: 2216 init1: 2216 opt: 2216 Z-score: 1871.3 bits: 354.9 E(85289): 1.7e-97
Smith-Waterman score: 2216; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB6 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVD
::::::::::
NP_001 EWCYCFQRQQGKR
310
433 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:11:35 2016 done: Sat Nov 5 17:11:37 2016
Total Scan time: 9.380 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]