Result of FASTA (ccds) for
pF1KB6625
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6625, 406 aa
1>>>pF1KB6625 406 - 406 aa - 406 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1624+/-0.000762; mu= 13.7918+/- 0.046
mean_var=96.7462+/-19.384, 0's: 0 Z-trim(111.4): 61 B-trim: 15 in 1/49
Lambda= 0.130394
statistics sampled from 12296 (12358) to 12296 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.38), width: 16
Scan time: 3.060
The best scores are: opt bits E(32554)
CCDS13515.1 ARFGAP1 gene_id:55738|Hs108|chr20 ( 406) 2800 536.7 1.4e-152
CCDS13516.1 ARFGAP1 gene_id:55738|Hs108|chr20 ( 414) 2521 484.3 9.2e-137
CCDS63327.1 ARFGAP1 gene_id:55738|Hs108|chr20 ( 361) 2111 407.1 1.4e-113
CCDS63326.1 ARFGAP1 gene_id:55738|Hs108|chr20 ( 403) 1897 366.9 1.9e-101
CCDS63328.1 ARFGAP1 gene_id:55738|Hs108|chr20 ( 293) 1794 347.4 1e-95
CCDS14042.1 ARFGAP3 gene_id:26286|Hs108|chr22 ( 516) 424 89.8 6.2e-18
CCDS7926.1 ARFGAP2 gene_id:84364|Hs108|chr11 ( 521) 379 81.4 2.2e-15
CCDS73283.1 ARFGAP2 gene_id:84364|Hs108|chr11 ( 493) 376 80.8 3.1e-15
CCDS46722.1 ARFGAP3 gene_id:26286|Hs108|chr22 ( 472) 316 69.5 7.5e-12
>>CCDS13515.1 ARFGAP1 gene_id:55738|Hs108|chr20 (406 aa)
initn: 2800 init1: 2800 opt: 2800 Z-score: 2852.6 bits: 536.7 E(32554): 1.4e-152
Smith-Waterman score: 2800; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KB6 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDVTTFFSGKAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDVTTFFSGKAEG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTCADTSTERRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTCADTSTERRS
310 320 330 340 350 360
370 380 390 400
pF1KB6 SDSWEVWGSASTNRNSNSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SDSWEVWGSASTNRNSNSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
370 380 390 400
>>CCDS13516.1 ARFGAP1 gene_id:55738|Hs108|chr20 (414 aa)
initn: 2536 init1: 1651 opt: 2521 Z-score: 2568.8 bits: 484.3 E(32554): 9.2e-137
Smith-Waterman score: 2744; 97.1% identity (97.1% similar) in 416 aa overlap (1-406:1-414)
10 20 30 40 50 60
pF1KB6 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQK-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKF
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 ---------ASELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDV
::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS13 WGHKQQPEPASELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASK--GVGSKGWRDV
250 260 270 280 290
300 310 320 330 340 350
pF1KB6 TTFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TTFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWT
300 310 320 330 340 350
360 370 380 390 400
pF1KB6 CADTSTERRSSDSWEVWGSASTNRNSNSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CADTSTERRSSDSWEVWGSASTNRNSNSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
360 370 380 390 400 410
>>CCDS63327.1 ARFGAP1 gene_id:55738|Hs108|chr20 (361 aa)
initn: 2126 init1: 1241 opt: 2111 Z-score: 2152.8 bits: 407.1 E(32554): 1.4e-113
Smith-Waterman score: 2334; 96.4% identity (96.7% similar) in 360 aa overlap (57-406:4-361)
30 40 50 60 70 80
pF1KB6 AFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREF
.:::::::::::::::::::::::::::::
CCDS63 MRTTFVRSVTMDKWKDIELEKMKAGGNAKFREF
10 20 30
90 100 110 120 130 140
pF1KB6 LESQEDYDPCWSLQEKYNSRAAALFRDKVVALAEGREWSLESSPAQNWTPPQPRTLPSMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LESQEDYDPCWSLQEKYNSRAAALFRDKVVALAEGREWSLESSPAQNWTPPQPRTLPSMV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 HRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSS
100 110 120 130 140 150
210 220 230 240 250
pF1KB6 LYSGWSSFTTGASRFASAAKEGATKFGSQASQK----------ASELGHSLNENVLKPAQ
::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS63 LYSGWSSFTTGASRFASAAKEGATKFGSQASQKFWGHKQQPEPASELGHSLNENVLKPAQ
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 EKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDVTTFFSGKAEGPLDSPSEGHSYQNSGL
:::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
CCDS63 EKVKEGKIFDDVSSGVSQLASK--GVGSKGWRDVTTFFSGKAEGPLDSPSEGHSYQNSGL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 DHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTCADTSTERRSSDSWEVWGSASTNRNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTCADTSTERRSSDSWEVWGSASTNRNS
280 290 300 310 320 330
380 390 400
pF1KB6 NSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
::::::::::::::::::::::::::::::
CCDS63 NSDGGEGGEGTKKAVPPAVPTDDGWDNQNW
340 350 360
>>CCDS63326.1 ARFGAP1 gene_id:55738|Hs108|chr20 (403 aa)
initn: 1929 init1: 1897 opt: 1897 Z-score: 1934.6 bits: 366.9 E(32554): 1.9e-101
Smith-Waterman score: 1897; 99.6% identity (99.6% similar) in 280 aa overlap (1-280:1-280)
10 20 30 40 50 60
pF1KB6 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 GREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQGAQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFGSQASQKA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDVTTFFSGKAEG
:::::::::::::::::::::::::::::::::::::: :
CCDS63 SELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKCQRRLCCHQSHCSAGHLGRAFC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 PLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTCADTSTERRS
CCDS63 PVSWHEALCGQTGREEQASLLPPKHVVGALEVCARGCPRCHVPHTPGTAAEWPGRLCLSR
310 320 330 340 350 360
>>CCDS63328.1 ARFGAP1 gene_id:55738|Hs108|chr20 (293 aa)
initn: 1775 init1: 1775 opt: 1794 Z-score: 1831.9 bits: 347.4 E(32554): 1e-95
Smith-Waterman score: 1794; 93.3% identity (96.1% similar) in 285 aa overlap (122-406:11-293)
100 110 120 130 140 150
pF1KB6 DYDPCWSLQEKYNSRAAALFRDKVVALAEGREWSLESSPAQNWTPPQPRTLPSMVHRVSG
:. .. ..: . : .:: ::. ::::
CCDS63 MLSSESSWSLRRITILAGPCRRSTTAEPR--PSLGIRVSG
10 20 30
160 170 180 190 200 210
pF1KB6 QPQSVTASSDKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 QPQSVTASSDKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGW
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB6 SSFTTGASRFASAAKEGATKFGSQASQKASELGHSLNENVLKPAQEKVKEGKIFDDVSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SSFTTGASRFASAAKEGATKFGSQASQKASELGHSLNENVLKPAQEKVKEGKIFDDVSSG
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB6 VSQLASKVQGVGSKGWRDVTTFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VSQLASKVQGVGSKGWRDVTTFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWET
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB6 FGSAEPTKTRKSPSSDSWTCADTSTERRSSDSWEVWGSASTNRNSNSDGGEGGEGTKKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 FGSAEPTKTRKSPSSDSWTCADTSTERRSSDSWEVWGSASTNRNSNSDGGEGGEGTKKAV
220 230 240 250 260 270
400
pF1KB6 PPAVPTDDGWDNQNW
:::::::::::::::
CCDS63 PPAVPTDDGWDNQNW
280 290
>>CCDS14042.1 ARFGAP3 gene_id:26286|Hs108|chr22 (516 aa)
initn: 368 init1: 250 opt: 424 Z-score: 435.5 bits: 89.8 E(32554): 6.2e-18
Smith-Waterman score: 442; 30.3% identity (57.2% similar) in 409 aa overlap (1-371:1-375)
10 20 30 40 50
pF1KB6 MASPRTRKVL---KEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLS
:..: . .: :..: :.:::.::: ::.:.:.:::...:..::: ::.::::::
CCDS14 MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FVRSVTMDK-WKDIELEKMKAGGNAKFREFLESQEDYDPCWS--LQEKYNSRAAALFRDK
:.::. .:. :. ..:. :..::::. :.... : . . ::::::: :.:.:
CCDS14 FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQH----GCSTNDTNAKYNSRAAQLYREK
70 80 90 100 110
120 130 140 150
pF1KB6 VVALA------EGREWSLESSPAQNWTPPQPRTLPSMVHRVS------------GQPQSV
. .:: .: . :.: . .:: :. .. .:: ..:.:.
CCDS14 IKSLASQATRKHGTDLWLDSCVVPPLSPP-PKEEDFFASHVSPEVSDTAWASAIAEPSSL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB6 TASSDKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTT
:. . : :... :. . :: :. :.: : .::. .
CCDS14 TS---RPVETTLENNEGGQE--QGPSVEGL-NVPTKATLE-------VSSIIK-------
180 190 200 210
220 230 240 250 260
pF1KB6 GASRFASAAKEG-ATKFGSQASQKASELGHSLNENVLKPAQ--EKVKE----GKIFDDVS
. . ::.: ..: :: ..:: :... ... : :: .:.:: .:. .
CCDS14 ---KKPNQAKKGLGAKKGSLGAQK---LANTCFNEIEKQAQAADKMKEQEDLAKVVSKEE
220 230 240 250 260
270 280 290 300 310 320
pF1KB6 SGVSQLASKVQGVGSKGWRDVTTFFSGKAEGPLDSPSEGHSYQN--SGLDHFQNSNIDQS
: ::.: . . . .: .::: . .:: : .. : : ..: .:...
CCDS14 SIVSSLRLAYKDLEIQMKKDEKMNISGKKN--VDSDRLGMGFGNCRSVISHSVTSDMQTI
270 280 290 300 310 320
330 340 350 360 370 380
pF1KB6 FWETFGSAEPTKTRKSPSSDSWTCADTS-----TERRSSDSWEVWGSASTNRNSNSDGGE
:. :.: : .. :.::. ...: .: ::: :. : ..:
CCDS14 EQESPIMAKPRKKYNDDSDDSYFTSSSSYFDEPVELRSS-SFSSWDDSSDSYWKKETSKD
330 340 350 360 370 380
390 400
pF1KB6 GGEGTKKAVPPAVPTDDGWDNQNW
CCDS14 TETVLKTTGYSDRPTARRKPDYEPVENTDEAQKKFGNVKAISSDMYFGRQSQADYETRAR
390 400 410 420 430 440
>>CCDS7926.1 ARFGAP2 gene_id:84364|Hs108|chr11 (521 aa)
initn: 334 init1: 250 opt: 379 Z-score: 389.7 bits: 81.4 E(32554): 2.2e-15
Smith-Waterman score: 386; 30.8% identity (64.3% similar) in 263 aa overlap (9-266:13-261)
10 20 30 40 50
pF1KB6 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHL
..:..:. :..::.::: ::.:.:.:::...:..::: ::.:::::
CCDS79 MAAEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SFVRSVTMDK-WKDIELEKMKAGGNAKFREFLESQEDYDPCWS--LQEKYNSRAAALFRD
::.::. .:. :. ..:. :..::::. :.... : . . ::::::: ..:.
CCDS79 SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQH----GCTANDANTKYNSRAAQMYRE
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 KVVALAEGREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLG
:. :. . .: .. : . ..:. . . . . .. :.. .. :
CCDS79 KIRQLGSA---ALARHGTDLWIDNMSSAVPNHSPEKKDSDFFTEHTQPPAWDAPATEPSG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 SYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGATKFG
. : : ... :... : . . :.:... .. ::. : .. :.: : ..: :
CCDS79 TQQPAPSTESSGLAQ--PEHGPNTDLLGTSPKASLELKSSII-GKKKPAAAKKGLGAKKG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 SQASQKASELGHSLNENVLKPAQ--EKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRDVT
: ::.: ..:..: . . :: ::..: . :
CCDS79 LGA-QKVS--SQSFSE-IERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRK
240 250 260 270 280
300 310 320 330 340 350
pF1KB6 TFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSDSWTC
CCDS79 KEEKKLQNLEGKKREQAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFD
290 300 310 320 330 340
>>CCDS73283.1 ARFGAP2 gene_id:84364|Hs108|chr11 (493 aa)
initn: 334 init1: 250 opt: 376 Z-score: 387.0 bits: 80.8 E(32554): 3.1e-15
Smith-Waterman score: 387; 28.8% identity (56.5% similar) in 416 aa overlap (9-398:13-406)
10 20 30 40 50
pF1KB6 MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHL
..:..:. :..::.::: ::.:.:.:::...:..::: ::.:::::
CCDS73 MAAEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SFVRSVTMDK-WKDIELEKMKAGGNAKFREFLESQEDYDPCWS--LQEKYNSRAAALFRD
::.::. .:. :. ..:. :..::::. :.... : . . ::::::: ..:.
CCDS73 SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQH----GCTANDANTKYNSRAAQMYRE
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 KVVALAEGREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAF-EDWLNDDL
:. :. . ..: : : : :: .. :: : :: : : : ::
CCDS73 KIRQLGSAALARHGTDPPA-WDAPA--TEPSGTQ----QPAPSTESSGLAQPEHGPNTDL
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 -GSYQGAQGN-RYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEGAT
:. :. . . .:. : :. ...... . .::. : :..:..
CCDS73 LGTSPKASLELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSSQSFSE-IERQAQVAEKLRE
170 180 190 200 210 220
240 250 260 270 280
pF1KB6 KFGSQASQKASE-LGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLASKVQGVGSKGWRD
. ...:...: : . :. . .. :: : .... . . : .. :.: . .
CCDS73 QQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERL-GMGLVSRSS
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB6 VT-TFFSGKAEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSS--
:. . .: ..: ..: . : :: :.. . ::.:. : : . .: :
CCDS73 VSHSVLSEMQVIEQETPVSAKS-SRSQLDLFDDVG-------TFASGPP-KYKDNPFSLG
290 300 310 320 330
350 360 370 380 390
pF1KB6 ----DSW-TCADTSTERRSSDSWEVWGSA-------STNR---NSNSDGGEGGEGTKK-A
. : : : . .: :: :. .::: .: :.: :..:. .: :
CCDS73 ESFGSRWDTDAAWGMDRVEEKEPEVTISSIRPISERATNRREVESRSSGLESSEARQKFA
340 350 360 370 380 390
400
pF1KB6 VPPAVPTDDGWDNQNW
:. .:
CCDS73 GAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLGNVLPT
400 410 420 430 440 450
>>CCDS46722.1 ARFGAP3 gene_id:26286|Hs108|chr22 (472 aa)
initn: 304 init1: 250 opt: 316 Z-score: 326.2 bits: 69.5 E(32554): 7.5e-12
Smith-Waterman score: 343; 28.3% identity (53.2% similar) in 389 aa overlap (1-371:1-331)
10 20 30 40 50
pF1KB6 MASPRTRKVL---KEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLS
:..: . .: :..: :.:::.::: ::.:.:.:::...:..::: ::.::::::
CCDS46 MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FVRSVTMDK-WKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVV
:.::. .:. :. ..:. :..:::: : : : . . .: ..:
CCDS46 FIRSTELDSNWSWFQLRCMQVGGNA-------SALWLDSCVVPPLSPPPKEEDFFASHVS
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 ALAEGREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASSDKAFEDWLNDDLGSYQ
. :. :. :. :.:.:. . : :... :. .
CCDS46 PEVSDTAWA--SAIAE--------------------PSSLTS---RPVETTLENNEGGQE
120 130 140
180 190 200 210 220 230
pF1KB6 GAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGASRFASAAKEG-ATKFGSQ
:: :. :.: : .::. . . . ::.: ..: ::
CCDS46 --QGPSVEGL-NVPTKATLE-------VSSIIK----------KKPNQAKKGLGAKKGSL
150 160 170 180
240 250 260 270 280
pF1KB6 ASQKASELGHSLNENVLKPAQ--EKVKE----GKIFDDVSSGVSQLASKVQGVGSKGWRD
..:: :... ... : :: .:.:: .:. . : ::.: . . . .:
CCDS46 GAQK---LANTCFNEIEKQAQAADKMKEQEDLAKVVSKEESIVSSLRLAYKDLEIQMKKD
190 200 210 220 230 240
290 300 310 320 330 340
pF1KB6 VTTFFSGKAEGPLDSPSEGHSYQN--SGLDHFQNSNIDQSFWETFGSAEPTKTRKSPSSD
.::: . .:: : .. : : ..: .:... :. :.: : .. :.:
CCDS46 EKMNISGKKN--VDSDRLGMGFGNCRSVISHSVTSDMQTIEQESPIMAKPRKKYNDDSDD
250 260 270 280 290 300
350 360 370 380 390 400
pF1KB6 SWTCADTS-----TERRSSDSWEVWGSASTNRNSNSDGGEGGEGTKKAVPPAVPTDDGWD
:. ...: .: ::: :. : ..:
CCDS46 SYFTSSSSYFDEPVELRSS-SFSSWDDSSDSYWKKETSKDTETVLKTTGYSDRPTARRKP
310 320 330 340 350 360
406 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:35:33 2016 done: Sat Nov 5 11:35:33 2016
Total Scan time: 3.060 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]