Result of FASTA (omim) for
pF1KB6631
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6631, 404 aa
1>>>pF1KB6631 404 - 404 aa - 404 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1616+/-0.000453; mu= 9.1169+/- 0.028
mean_var=167.8653+/-33.038, 0's: 0 Z-trim(116.3): 262 B-trim: 283 in 1/51
Lambda= 0.098991
statistics sampled from 27128 (27414) to 27128 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.321), width: 16
Scan time: 8.990
The best scores are: opt bits E(85289)
NP_066978 (OMIM: 604672,607948,609423,614371) CD20 ( 404) 2695 397.2 3.7e-110
NP_001138369 (OMIM: 604672,607948,609423,614371) C ( 398) 2634 388.5 1.5e-107
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360) 2317 343.2 6e-94
NP_001138368 (OMIM: 604672,607948,609423,614371) C ( 380) 2314 342.8 8.4e-94
XP_006722674 (OMIM: 605872) PREDICTED: C-type lect ( 398) 2079 309.2 1.1e-83
NP_055072 (OMIM: 605872) C-type lectin domain fami ( 399) 2079 309.2 1.1e-83
XP_006722676 (OMIM: 605872) PREDICTED: C-type lect ( 371) 2044 304.2 3.4e-82
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343) 1926 287.3 3.8e-77
XP_006722675 (OMIM: 605872) PREDICTED: C-type lect ( 371) 1922 286.8 5.9e-77
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 1688 253.4 6.5e-67
NP_001138377 (OMIM: 605872) C-type lectin domain f ( 375) 1688 253.4 6.8e-67
NP_001138382 (OMIM: 605872) C-type lectin domain f ( 376) 1688 253.4 6.9e-67
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268) 1605 241.4 2e-63
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312) 1600 240.7 3.6e-63
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 1572 236.8 6.1e-62
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 1552 233.9 4.6e-61
XP_006722678 (OMIM: 605872) PREDICTED: C-type lect ( 324) 1543 232.6 1.1e-60
NP_001138383 (OMIM: 605872) C-type lectin domain f ( 296) 1508 227.6 3.2e-59
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266) 1358 206.1 8.2e-53
NP_001138371 (OMIM: 604672,607948,609423,614371) C ( 243) 1243 189.6 6.8e-48
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263) 1176 180.1 5.5e-45
NP_001138380 (OMIM: 605872) C-type lectin domain f ( 232) 765 121.4 2.3e-27
XP_011521916 (OMIM: 605999) PREDICTED: C-type lect ( 319) 414 71.4 3.6e-12
XP_011521915 (OMIM: 605999) PREDICTED: C-type lect ( 319) 414 71.4 3.6e-12
NP_878910 (OMIM: 605999) C-type lectin domain fami ( 316) 411 70.9 4.8e-12
XP_011518916 (OMIM: 609962) PREDICTED: C-type lect ( 188) 404 69.7 6.7e-12
XP_016882279 (OMIM: 616838) PREDICTED: C-type lect ( 293) 407 70.3 6.8e-12
XP_016882278 (OMIM: 616838) PREDICTED: C-type lect ( 310) 407 70.4 7e-12
XP_016882274 (OMIM: 616838) PREDICTED: C-type lect ( 310) 407 70.4 7e-12
XP_016882275 (OMIM: 616838) PREDICTED: C-type lect ( 310) 407 70.4 7e-12
XP_016882277 (OMIM: 616838) PREDICTED: C-type lect ( 310) 407 70.4 7e-12
XP_016882276 (OMIM: 616838) PREDICTED: C-type lect ( 310) 407 70.4 7e-12
NP_055173 (OMIM: 609962) C-type lectin domain fami ( 219) 404 69.8 7.4e-12
NP_001191047 (OMIM: 616838) C-type lectin domain f ( 378) 407 70.4 8.1e-12
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292) 405 70.0 8.2e-12
XP_016882280 (OMIM: 616838) PREDICTED: C-type lect ( 243) 403 69.7 8.8e-12
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289) 402 69.6 1.1e-11
NP_001231785 (OMIM: 616256) C-type lectin domain f ( 281) 375 65.7 1.6e-10
XP_006721587 (OMIM: 108361) PREDICTED: asialoglyco ( 248) 374 65.6 1.6e-10
NP_940894 (OMIM: 616256) C-type lectin domain fami ( 293) 375 65.8 1.6e-10
NP_001184145 (OMIM: 108360) asialoglycoprotein rec ( 252) 372 65.3 1.9e-10
NP_550436 (OMIM: 108361) asialoglycoprotein recept ( 292) 369 64.9 2.9e-10
NP_550434 (OMIM: 108361) asialoglycoprotein recept ( 311) 369 64.9 3e-10
NP_001172 (OMIM: 108361) asialoglycoprotein recept ( 311) 369 64.9 3e-10
XP_006721589 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 367 64.6 3.5e-10
XP_005256705 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 367 64.6 3.5e-10
NP_550435 (OMIM: 108361) asialoglycoprotein recept ( 287) 367 64.6 3.5e-10
NP_001188281 (OMIM: 108361) asialoglycoprotein rec ( 306) 367 64.6 3.7e-10
XP_011521917 (OMIM: 605999) PREDICTED: C-type lect ( 315) 367 64.7 3.7e-10
NP_987099 (OMIM: 606677) C-type lectin domain fami ( 182) 363 63.9 3.8e-10
>>NP_066978 (OMIM: 604672,607948,609423,614371) CD209 an (404 aa)
initn: 2695 init1: 2695 opt: 2695 Z-score: 2098.7 bits: 397.2 E(85289): 3.7e-110
Smith-Waterman score: 2695; 100.0% identity (100.0% similar) in 404 aa overlap (1-404:1-404)
10 20 30 40 50 60
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
310 320 330 340 350 360
370 380 390 400
pF1KB6 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
::::::::::::::::::::::::::::::::::::::::::::
NP_066 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
370 380 390 400
>>NP_001138369 (OMIM: 604672,607948,609423,614371) CD209 (398 aa)
initn: 1925 init1: 1925 opt: 2634 Z-score: 2051.7 bits: 388.5 E(85289): 1.5e-107
Smith-Waterman score: 2634; 98.5% identity (98.5% similar) in 404 aa overlap (1-404:1-398)
10 20 30 40 50 60
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ------SSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
310 320 330 340 350
370 380 390 400
pF1KB6 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
360 370 380 390
>>NP_001138366 (OMIM: 604672,607948,609423,614371) CD209 (360 aa)
initn: 2313 init1: 2313 opt: 2317 Z-score: 1807.6 bits: 343.2 E(85289): 6e-94
Smith-Waterman score: 2317; 99.4% identity (99.4% similar) in 350 aa overlap (55-404:13-360)
30 40 50 60 70 80
pF1KB6 FRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQVSKVPSSISQEQSRQDAIYQNLTQL
::: :::::::::::::::::::::::::
NP_001 MSDSKEPRLQQLGLL--VSKVPSSISQEQSRQDAIYQNLTQL
10 20 30 40
90 100 110 120 130 140
pF1KB6 KAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQ
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB6 EIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVG
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB6 ELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQ
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB6 GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQE
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB6 GTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASC
290 300 310 320 330 340
390 400
pF1KB6 SRDEEQFLSPAPATPNPPPA
::::::::::::::::::::
NP_001 SRDEEQFLSPAPATPNPPPA
350 360
>>NP_001138368 (OMIM: 604672,607948,609423,614371) CD209 (380 aa)
initn: 2313 init1: 2313 opt: 2314 Z-score: 1805.0 bits: 342.8 E(85289): 8.4e-94
Smith-Waterman score: 2480; 94.1% identity (94.1% similar) in 404 aa overlap (1-404:1-380)
10 20 30 40 50 60
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQV
::::::::::::::::::::::::::::::::::: :
NP_001 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLA------------------------V
10 20 30
70 80 90 100 110 120
pF1KB6 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQ
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB6 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB6 NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFS
280 290 300 310 320 330
370 380 390 400
pF1KB6 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
340 350 360 370 380
>>XP_006722674 (OMIM: 605872) PREDICTED: C-type lectin d (398 aa)
initn: 1928 init1: 1928 opt: 2079 Z-score: 1623.3 bits: 309.2 E(85289): 1.1e-83
Smith-Waterman score: 2154; 82.7% identity (91.5% similar) in 399 aa overlap (1-388:1-398)
10 20 30 40 50
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGL-------GFRQTRGYKSLAGCLGHGPLVLQLLSFTLL
::::::::.:::::::. :. :.: .:.:: .:::::: :::::::: ::
XP_006 MSDSKEPRVQQLGLLEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLL
10 20 30 40 50 60
60 70 80 90 100
pF1KB6 AG----LLVQVSKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKA
:: .::::::::::.:::::.::::::::::::::::::::::::::::::::::::
XP_006 AGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 AVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEI
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::.:::
XP_006 AVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEI
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 YQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGEL
::::::::::::::::::: ::::::::.::::::::::::: ::::::::.::::::::
XP_006 YQELTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGEL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 PEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGA
:..::::.::::::.::.: ::::. :: .:::::::::::::::::::::.:::.:: :
XP_006 PDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 QLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPN
::::::.::::::::::.::::::.::::::::::::::::::::: :::..::: ::::
XP_006 QLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPN
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 NVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
: :.::::::::.::::..:.. ..::::: :: : :::
XP_006 NSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAA-CFRDE
370 380 390
>>NP_055072 (OMIM: 605872) C-type lectin domain family 4 (399 aa)
initn: 1928 init1: 1928 opt: 2079 Z-score: 1623.3 bits: 309.2 E(85289): 1.1e-83
Smith-Waterman score: 2157; 82.8% identity (91.5% similar) in 400 aa overlap (1-388:1-399)
10 20 30 40 50
pF1KB6 MSDSKEPRLQQLGLLEEEQL--------RGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTL
::::::::.::::::::. : . :.: .:.:: .:::::: :::::::: :
NP_055 MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFML
10 20 30 40 50 60
60 70 80 90 100
pF1KB6 LAG----LLVQVSKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLK
::: .::::::::::.:::::.:::::::::::::::::::::::::::::::::::
NP_055 LAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 AAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQE
::::::::::::::::::::::::::::::::::::::::::: :::::::::::::.::
NP_055 AAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 IYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGE
:::::::::::::::::::: ::::::::.::::::::::::: ::::::::.:::::::
NP_055 IYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGE
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 LPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVG
::..::::.::::::.::.: ::::. :: .:::::::::::::::::::::.:::.::
NP_055 LPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVR
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 AQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEP
:::::::.::::::::::.::::::.::::::::::::::::::::: :::..::: :::
NP_055 AQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEP
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB6 NNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
:: :.::::::::.::::..:.. ..::::: :: : :::
NP_055 NNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAA-CFRDE
370 380 390
>>XP_006722676 (OMIM: 605872) PREDICTED: C-type lectin d (371 aa)
initn: 1928 init1: 1928 opt: 2044 Z-score: 1596.7 bits: 304.2 E(85289): 3.4e-82
Smith-Waterman score: 2083; 82.4% identity (89.8% similar) in 392 aa overlap (1-388:1-371)
10 20 30 40 50
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAG----L
::::::::.:::::: :::::: :::::::: :::: .
XP_006 MSDSKEPRVQQLGLL--------------------GCLGHGALVLQLLSFMLLAGVLVAI
10 20 30 40
60 70 80 90 100 110
pF1KB6 LVQVSKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPE
::::::::::.:::::.:::::::::::::::::::::::::::::::::::::::::::
XP_006 LVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 KSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRL
::::::::::::::::::::::::::::::::::: :::::::::::::.::::::::::
XP_006 KSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 KAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQ
:::::::::::: ::::::::.::::::::::::: ::::::::.:::::::::..::::
XP_006 KAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQ
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 EIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKS
.::::::.::.: ::::. :: .:::::::::::::::::::::.:::.:: :::::::.
XP_006 QIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKT
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB6 AEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDC
::::::::::.::::::.::::::::::::::::::::: :::..::: ::::: :.:::
XP_006 AEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDC
290 300 310 320 330 340
360 370 380 390 400
pF1KB6 AEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
:::::.::::..:.. ..::::: :: : :::
XP_006 AEFSGSGWNDNRCDVDNYWICKKPAA-CFRDE
350 360 370
>>XP_006722677 (OMIM: 605872) PREDICTED: C-type lectin d (343 aa)
initn: 1903 init1: 1903 opt: 1926 Z-score: 1506.1 bits: 287.3 E(85289): 3.8e-77
Smith-Waterman score: 1926; 87.1% identity (95.2% similar) in 334 aa overlap (55-388:13-343)
30 40 50 60 70 80
pF1KB6 FRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQVSKVPSSISQEQSRQDAIYQNLTQL
::: :::::::.:::::.:::::::::::
XP_006 MSDSKEPRVQQLGLL--VSKVPSSLSQEQSEQDAIYQNLTQL
10 20 30 40
90 100 110 120 130 140
pF1KB6 KAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQ
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB6 EIYQELTWLKAAVGELPEKSKMQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVG
::::::: :::::::::::::.:::::::::::::::::::::: ::::::::.::::::
XP_006 EIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVG
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB6 ELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAAVERLCHPCPWEWTFFQ
::::::: ::::::::.:::::::::..::::.::::::.::.: ::::. :: .:::::
XP_006 ELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQ
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB6 GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQE
::::::::::::::::.:::.:: :::::::.::::::::::.::::::.::::::::::
XP_006 GNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQE
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB6 GTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASC
::::::::::: :::..::: ::::: :.::::::::.::::..:.. ..::::: :: :
XP_006 GTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAA-C
290 300 310 320 330
390 400
pF1KB6 SRDEEQFLSPAPATPNPPPA
:::
XP_006 FRDE
340
>>XP_006722675 (OMIM: 605872) PREDICTED: C-type lectin d (371 aa)
initn: 1903 init1: 1903 opt: 1922 Z-score: 1502.6 bits: 286.8 E(85289): 5.9e-77
Smith-Waterman score: 1980; 78.3% identity (86.9% similar) in 396 aa overlap (1-388:1-371)
10 20 30 40 50
pF1KB6 MSDSKEPRLQQLGLLEEEQL--------RGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTL
::::::::.::::::::. : . :.: .:.:: .
XP_006 MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSST-----------------
10 20 30 40
60 70 80 90 100 110
pF1KB6 LAGLLVQVSKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVG
:::::::.:::::.:::::::::::::::::::::::::::::::::::::::
XP_006 -------VSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVG
50 60 70 80 90
120 130 140 150 160 170
pF1KB6 ELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQE
::::::::::::::::::::::::::::::::::::::: :::::::::::::.::::::
XP_006 ELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 LTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEK
:::::::::::::::: ::::::::.::::::::::::: ::::::::.:::::::::..
XP_006 LTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQ
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 SKQQEIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLV
::::.::::::.::.: ::::. :: .:::::::::::::::::::::.:::.:: ::::
XP_006 SKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVG
:::.::::::::::.::::::.::::::::::::::::::::: :::..::: ::::: :
XP_006 VIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSG
280 290 300 310 320 330
360 370 380 390 400
pF1KB6 EEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
.::::::::.::::..:.. ..::::: :: : :::
XP_006 NEDCAEFSGSGWNDNRCDVDNYWICKKPAA-CFRDE
340 350 360 370
>>NP_001138376 (OMIM: 605872) C-type lectin domain famil (348 aa)
initn: 1663 init1: 1663 opt: 1688 Z-score: 1322.3 bits: 253.4 E(85289): 6.5e-67
Smith-Waterman score: 1900; 77.0% identity (84.2% similar) in 392 aa overlap (1-388:1-348)
10 20 30 40 50
pF1KB6 MSDSKEPRLQQLGLLEEEQLRGLGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAG----L
::::::::.:::::: :::::: :::::::: :::: .
NP_001 MSDSKEPRVQQLGLL--------------------GCLGHGALVLQLLSFMLLAGVLVAI
10 20 30 40
60 70 80 90 100 110
pF1KB6 LVQVSKVPSSISQEQSRQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPE
::::::::::.:::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 LVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 KSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAAVGELPEKSKMQEIYQELTRL
:::::::::::::::::::::::::::::: :::::::
NP_001 KSKLQEIYQELTRLKAAVGELPEKSKLQEI-----------------------YQELTRL
110 120 130
180 190 200 210 220 230
pF1KB6 KAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQ
:::::::::::: ::::::::.::::::::::::: ::::::::.:::::::::..::::
NP_001 KAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQ
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB6 EIYQELTQLKAAVERLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKS
.::::::.::.: ::::. :: .:::::::::::::::::::::.:::.:: :::::::.
NP_001 QIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKT
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB6 AEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDC
::::::::::.::::::.::::::::::::::::::::: :::..::: ::::: :.:::
NP_001 AEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDC
260 270 280 290 300 310
360 370 380 390 400
pF1KB6 AEFSGNGWNDDKCNLAKFWICKKSAASCSRDEEQFLSPAPATPNPPPA
:::::.::::..:.. ..::::: :: : :::
NP_001 AEFSGSGWNDNRCDVDNYWICKKPAA-CFRDE
320 330 340
404 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:11:00 2016 done: Sat Nov 5 11:11:01 2016
Total Scan time: 8.990 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]