Result of FASTA (omim) for
pF1KB6632
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6632, 440 aa
1>>>pF1KB6632 440 - 440 aa - 440 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.7756+/-0.000403; mu= -15.5602+/- 0.025
mean_var=457.2696+/-95.799, 0's: 0 Z-trim(124.3): 15 B-trim: 864 in 1/59
Lambda= 0.059977
statistics sampled from 45739 (45754) to 45739 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.536), width: 16
Scan time: 11.730
The best scores are: opt bits E(85289)
NP_114105 (OMIM: 606867) Golgi reassembly-stacking ( 440) 2983 272.0 2.1e-72
XP_006713364 (OMIM: 606867) PREDICTED: Golgi reass ( 445) 2847 260.3 7.5e-69
NP_001265718 (OMIM: 606867) Golgi reassembly-stack ( 345) 2207 204.8 2.9e-52
XP_016862541 (OMIM: 606867) PREDICTED: Golgi reass ( 283) 1727 163.2 7.9e-40
NP_001265719 (OMIM: 606867) Golgi reassembly-stack ( 285) 1605 152.6 1.2e-36
XP_016862540 (OMIM: 606867) PREDICTED: Golgi reass ( 380) 1605 152.7 1.5e-36
XP_011532323 (OMIM: 606867) PREDICTED: Golgi reass ( 385) 1605 152.7 1.5e-36
XP_016862539 (OMIM: 606867) PREDICTED: Golgi reass ( 410) 1604 152.7 1.7e-36
XP_011532322 (OMIM: 606867) PREDICTED: Golgi reass ( 415) 1604 152.7 1.7e-36
NP_056345 (OMIM: 608693) Golgi reassembly-stacking ( 452) 1080 107.4 8.1e-23
XP_006712471 (OMIM: 608693) PREDICTED: Golgi reass ( 384) 769 80.4 9e-15
NP_001188357 (OMIM: 608693) Golgi reassembly-stack ( 384) 769 80.4 9e-15
>>NP_114105 (OMIM: 606867) Golgi reassembly-stacking pro (440 aa)
initn: 2983 init1: 2983 opt: 2983 Z-score: 1420.7 bits: 272.0 E(85289): 2.1e-72
Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 440 aa overlap (1-440:1-440)
10 20 30 40 50 60
pF1KB6 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 NAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
370 380 390 400 410 420
430 440
pF1KB6 LDTGTEAEGLDSQAQISTTE
::::::::::::::::::::
NP_114 LDTGTEAEGLDSQAQISTTE
430 440
>>XP_006713364 (OMIM: 606867) PREDICTED: Golgi reassembl (445 aa)
initn: 2836 init1: 2836 opt: 2847 Z-score: 1357.1 bits: 260.3 E(85289): 7.5e-69
Smith-Waterman score: 2847; 95.5% identity (97.1% similar) in 445 aa overlap (1-440:1-445)
10 20 30 40 50
pF1KB6 MGLGVSAEQPAGGAEGFH-----LHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
::. . .: :. :.: .. ::::::::::::::::::::::::::::::::::
XP_006 MGFLMVRHQTASVDSGMHPARSVFQQVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LDVEPSSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LDVEPSSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 VTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
370 380 390 400 410 420
420 430 440
pF1KB6 ASTEGLDTGTEAEGLDSQAQISTTE
:::::::::::::::::::::::::
XP_006 ASTEGLDTGTEAEGLDSQAQISTTE
430 440
>>NP_001265718 (OMIM: 606867) Golgi reassembly-stacking (345 aa)
initn: 2207 init1: 2207 opt: 2207 Z-score: 1059.3 bits: 204.8 E(85289): 2.9e-52
Smith-Waterman score: 2207; 100.0% identity (100.0% similar) in 324 aa overlap (117-440:22-345)
90 100 110 120 130 140
pF1KB6 SNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEPSSPAALAGLRPYTDYVVGSDQILQES
::::::::::::::::::::::::::::::
NP_001 MGLGVSAEQPAGGAEGFHLHGDVEPSSPAALAGLRPYTDYVVGSDQILQES
10 20 30 40 50
150 160 170 180 190 200
pF1KB6 EDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQP
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB6 PSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSME
120 130 140 150 160 170
270 280 290 300 310 320
pF1KB6 DPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPS
180 190 200 210 220 230
330 340 350 360 370 380
pF1KB6 LPSSTELTTTAVSTSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPSSTELTTTAVSTSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQL
240 250 260 270 280 290
390 400 410 420 430 440
pF1KB6 TLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
300 310 320 330 340
>>XP_016862541 (OMIM: 606867) PREDICTED: Golgi reassembl (283 aa)
initn: 1727 init1: 1727 opt: 1727 Z-score: 836.0 bits: 163.2 E(85289): 7.9e-40
Smith-Waterman score: 1727; 100.0% identity (100.0% similar) in 252 aa overlap (189-440:32-283)
160 170 180 190 200 210
pF1KB6 KPLKLMVYNSKSDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPP
::::::::::::::::::::::::::::::
XP_016 CWMWNHLHLLPLPACAPTQTMWLVRTRFSRSLGCGIGYGYLHRIPTQPPSYHKKPPGTPP
10 20 30 40 50 60
220 230 240 250 260 270
pF1KB6 PSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHS
70 80 90 100 110 120
280 290 300 310 320 330
pF1KB6 APDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAV
130 140 150 160 170 180
340 350 360 370 380 390
pF1KB6 STSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASP
190 200 210 220 230 240
400 410 420 430 440
pF1KB6 EDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
::::::::::::::::::::::::::::::::::::::::::
XP_016 EDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
250 260 270 280
>>NP_001265719 (OMIM: 606867) Golgi reassembly-stacking (285 aa)
initn: 1739 init1: 1604 opt: 1605 Z-score: 778.9 bits: 152.6 E(85289): 1.2e-36
Smith-Waterman score: 1661; 81.5% identity (81.5% similar) in 324 aa overlap (117-440:22-285)
90 100 110 120 130 140
pF1KB6 SNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEPSSPAALAGLRPYTDYVVGSDQILQES
:::::::::::::::::::::::::::::
NP_001 MGLGVSAEQPAGGAEGFHLHGDVEPSSPAALAGLRPYTDYVVGSDQILQE-
10 20 30 40 50
150 160 170 180 190 200
pF1KB6 EDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQP
:
NP_001 -----------------------------------------------------------P
210 220 230 240 250 260
pF1KB6 PSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSME
60 70 80 90 100 110
270 280 290 300 310 320
pF1KB6 DPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPS
120 130 140 150 160 170
330 340 350 360 370 380
pF1KB6 LPSSTELTTTAVSTSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPSSTELTTTAVSTSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQL
180 190 200 210 220 230
390 400 410 420 430 440
pF1KB6 TLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
240 250 260 270 280
>>XP_016862540 (OMIM: 606867) PREDICTED: Golgi reassembl (380 aa)
initn: 1676 init1: 1604 opt: 1605 Z-score: 777.2 bits: 152.7 E(85289): 1.5e-36
Smith-Waterman score: 2437; 86.4% identity (86.4% similar) in 440 aa overlap (1-440:1-380)
10 20 30 40 50 60
pF1KB6 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTP
:::::::::::::::::::::::::
XP_016 SSPAALAGLRPYTDYVVGSDQILQE-----------------------------------
130 140
190 200 210 220 230 240
pF1KB6 NAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
:::::::::::::::::::::::::::::::::::
XP_016 -------------------------PPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
150 160 170 180
250 260 270 280 290 300
pF1KB6 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB6 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
250 260 270 280 290 300
370 380 390 400 410 420
pF1KB6 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
310 320 330 340 350 360
430 440
pF1KB6 LDTGTEAEGLDSQAQISTTE
::::::::::::::::::::
XP_016 LDTGTEAEGLDSQAQISTTE
370 380
>>XP_011532323 (OMIM: 606867) PREDICTED: Golgi reassembl (385 aa)
initn: 1676 init1: 1604 opt: 1605 Z-score: 777.1 bits: 152.7 E(85289): 1.5e-36
Smith-Waterman score: 2301; 82.0% identity (83.6% similar) in 445 aa overlap (1-440:1-385)
10 20 30 40 50
pF1KB6 MGLGVSAEQPAGGAEGFH-----LHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
::. . .: :. :.: .. ::::::::::::::::::::::::::::::::::
XP_011 MGFLMVRHQTASVDSGMHPARSVFQQVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LDVEPSSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE
::::::::::::::::::::::::::::::
XP_011 LDVEPSSPAALAGLRPYTDYVVGSDQILQE------------------------------
130 140 150
180 190 200 210 220 230
pF1KB6 VTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPG
::::::::::::::::::::::::::::::
XP_011 ------------------------------PPSYHKKPPGTPPPSALPLGAPPPDALPPG
160 170 180
240 250 260 270 280 290
pF1KB6 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
190 200 210 220 230 240
300 310 320 330 340 350
pF1KB6 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB6 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
310 320 330 340 350 360
420 430 440
pF1KB6 ASTEGLDTGTEAEGLDSQAQISTTE
:::::::::::::::::::::::::
XP_011 ASTEGLDTGTEAEGLDSQAQISTTE
370 380
>>XP_016862539 (OMIM: 606867) PREDICTED: Golgi reassembl (410 aa)
initn: 1604 init1: 1604 opt: 1604 Z-score: 776.3 bits: 152.7 E(85289): 1.7e-36
Smith-Waterman score: 2696; 93.2% identity (93.2% similar) in 440 aa overlap (1-440:1-410)
10 20 30 40 50 60
pF1KB6 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE-----
130 140 150 160 170
190 200 210 220 230 240
pF1KB6 NAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
:::::::::::::::::::::::::::::::::::
XP_016 -------------------------PPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPED
180 190 200 210
250 260 270 280 290 300
pF1KB6 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB6 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHERGGEAT
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB6 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEG
340 350 360 370 380 390
430 440
pF1KB6 LDTGTEAEGLDSQAQISTTE
::::::::::::::::::::
XP_016 LDTGTEAEGLDSQAQISTTE
400 410
>>XP_011532322 (OMIM: 606867) PREDICTED: Golgi reassembl (415 aa)
initn: 1668 init1: 1604 opt: 1604 Z-score: 776.2 bits: 152.7 E(85289): 1.7e-36
Smith-Waterman score: 2560; 88.8% identity (90.3% similar) in 445 aa overlap (1-440:1-415)
10 20 30 40 50
pF1KB6 MGLGVSAEQPAGGAEGFH-----LHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
::. . .: :. :.: .. ::::::::::::::::::::::::::::::::::
XP_011 MGFLMVRHQTASVDSGMHPARSVFQQVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KALLKANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LDVEPSSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDVEPSSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCRE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 VTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPG
::::::::::::::::::::::::::::::
XP_011 ------------------------------PPSYHKKPPGTPPPSALPLGAPPPDALPPG
190 200 210
240 250 260 270 280 290
pF1KB6 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQP
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTTAVSTSGPEDICSSSSSHER
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB6 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEP
340 350 360 370 380 390
420 430 440
pF1KB6 ASTEGLDTGTEAEGLDSQAQISTTE
:::::::::::::::::::::::::
XP_011 ASTEGLDTGTEAEGLDSQAQISTTE
400 410
>>NP_056345 (OMIM: 608693) Golgi reassembly-stacking pro (452 aa)
initn: 1124 init1: 1038 opt: 1080 Z-score: 530.7 bits: 107.4 E(85289): 8.1e-23
Smith-Waterman score: 1100; 45.8% identity (65.7% similar) in 432 aa overlap (1-398:1-422)
10 20 30 40 50 60
pF1KB6 MGLGVSAEQPAGGAEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLK
:: . :.: :.::.::.:. ::::::...:::::.::::..:. :::::.::::: :::
NP_056 MGSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ANVEKPVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEQVWHVLDVEP
::::::::. ... ::...::. :.:::.::::::::.:.::::: :.:.:::::.::
NP_056 ANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SSPAALAGLRPYTDYVVGSDQILQESEDFFTLIESHEGKPLKLMVYNSKSDSCREVTVTP
.::::::::::..::..:.: ...::::.:.:::.::.:::::.:::. .:.:::: .::
NP_056 NSPAALAGLRPHSDYIIGADTVMNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITP
130 140 150 160 170 180
190 200 210 220
pF1KB6 NAAWGGEGSLGCGIGYGYLHRIPTQPPSYHKKP--PGT---PPPSALPLG--------AP
:.::::::::::::::::::::::.: :: :: : . : : .
NP_056 NSAWGGEGSLGCGIGYGYLHRIPTRPFEEGKKISLPGQMAGTPITPLKDGFTEVQLSSVN
190 200 210 220 230 240
230 240 250 260 270
pF1KB6 PPDALPPGPTP-EDSPSLETGSRQSDYMEALLQA--PGSSMEDP--------LPGPGSPS
::. ::: : :.: . . : . ..:.. : . : .: : .:.
NP_056 PPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGVPTVPLLPPQVNQSLTSVP-PMNPA
250 260 270 280 290
280 290 300 310 320 330
pF1KB6 HSAPD----PDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTE
. : : :::.. . :. : : ..: :: :. : : . ::.: .
NP_056 TTLPGLMPLPAGLPNLPNLNLNLPAP--HIM-PGV----GLPELVNPGLPPLPSMPPRN-
300 310 320 330 340 350
340 350 360 370 380
pF1KB6 LTTTAVSTSGPEDICSS------SSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQL
: : : .. : ::: .:: : . : . :.:: .:
NP_056 LPGIA-PLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNAPSDPATTTAKADAASSL
360 370 380 390 400 410
390 400 410 420 430 440
pF1KB6 TLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE
:. . .: .:
NP_056 TVDVTPPTAKAPTTVEDRVGDSTPVSEKPVSAAVDANASESP
420 430 440 450
440 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:37:58 2016 done: Sat Nov 5 11:37:59 2016
Total Scan time: 11.730 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]