Result of FASTA (ccds) for
pF1KB6639
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6639, 418 aa
1>>>pF1KB6639 418 - 418 aa - 418 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2308+/-0.000993; mu= 17.2913+/- 0.060
mean_var=63.2216+/-12.660, 0's: 0 Z-trim(104.5): 39 B-trim: 266 in 1/50
Lambda= 0.161303
statistics sampled from 7901 (7939) to 7901 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.244), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS33277.1 ACTR3 gene_id:10096|Hs108|chr2 ( 418) 2839 669.6 1.6e-192
CCDS5934.1 ACTR3B gene_id:57180|Hs108|chr7 ( 418) 2657 627.2 8.7e-180
CCDS63000.1 ACTR3 gene_id:10096|Hs108|chr2 ( 367) 2491 588.6 3.3e-168
CCDS34782.1 ACTR3B gene_id:57180|Hs108|chr7 ( 348) 1996 473.4 1.5e-133
CCDS47744.1 ACTR3C gene_id:653857|Hs108|chr7 ( 210) 1146 275.4 3.5e-74
CCDS46307.1 ACTR2 gene_id:10097|Hs108|chr2 ( 399) 666 163.9 2.5e-40
CCDS1881.1 ACTR2 gene_id:10097|Hs108|chr2 ( 394) 592 146.7 3.8e-35
CCDS5341.1 ACTB gene_id:60|Hs108|chr7 ( 375) 590 146.2 5e-35
CCDS11782.1 ACTG1 gene_id:71|Hs108|chr17 ( 375) 590 146.2 5e-35
CCDS34163.1 ACTBL2 gene_id:345651|Hs108|chr5 ( 376) 582 144.3 1.8e-34
CCDS10041.1 ACTC1 gene_id:70|Hs108|chr15 ( 377) 578 143.4 3.5e-34
CCDS1578.1 ACTA1 gene_id:58|Hs108|chr1 ( 377) 578 143.4 3.5e-34
CCDS1930.1 ACTG2 gene_id:72|Hs108|chr2 ( 376) 575 142.7 5.7e-34
CCDS7392.1 ACTA2 gene_id:59|Hs108|chr10 ( 377) 575 142.7 5.7e-34
CCDS59431.1 POTEI gene_id:653269|Hs108|chr2 (1075) 528 132.0 2.7e-30
CCDS59432.1 POTEJ gene_id:653781|Hs108|chr2 (1038) 527 131.8 3.1e-30
CCDS46414.1 POTEE gene_id:445582|Hs108|chr2 (1075) 522 130.6 7.1e-30
CCDS46409.1 POTEF gene_id:728378|Hs108|chr2 (1075) 513 128.5 3e-29
CCDS7536.1 ACTR1A gene_id:10121|Hs108|chr10 ( 376) 501 125.5 8.6e-29
CCDS2033.1 ACTR1B gene_id:10120|Hs108|chr2 ( 376) 497 124.5 1.6e-28
CCDS45.1 ACTRT2 gene_id:140625|Hs108|chr1 ( 377) 453 114.3 2e-25
CCDS14611.1 ACTRT1 gene_id:139741|Hs108|chrX ( 376) 439 111.0 1.9e-24
CCDS3206.1 ACTRT3 gene_id:84517|Hs108|chr3 ( 372) 434 109.9 4.2e-24
CCDS6771.1 ACTL7B gene_id:10880|Hs108|chr9 ( 415) 411 104.6 1.9e-22
CCDS12207.1 ACTL9 gene_id:284382|Hs108|chr19 ( 416) 411 104.6 1.9e-22
CCDS5702.1 ACTL6B gene_id:51412|Hs108|chr7 ( 426) 403 102.7 7e-22
CCDS6772.1 ACTL7A gene_id:10881|Hs108|chr9 ( 435) 395 100.8 2.6e-21
CCDS56124.1 ACTG2 gene_id:72|Hs108|chr2 ( 333) 386 98.7 8.9e-21
CCDS3231.1 ACTL6A gene_id:86|Hs108|chr3 ( 429) 379 97.1 3.4e-20
CCDS43174.1 ACTL6A gene_id:86|Hs108|chr3 ( 387) 348 89.9 4.6e-18
CCDS183.1 ACTL8 gene_id:81569|Hs108|chr1 ( 366) 301 78.9 8.7e-15
>>CCDS33277.1 ACTR3 gene_id:10096|Hs108|chr2 (418 aa)
initn: 2839 init1: 2839 opt: 2839 Z-score: 3570.1 bits: 669.6 E(32554): 1.6e-192
Smith-Waterman score: 2839; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
370 380 390 400 410
>>CCDS5934.1 ACTR3B gene_id:57180|Hs108|chr7 (418 aa)
initn: 2657 init1: 2657 opt: 2657 Z-score: 3341.2 bits: 627.2 E(32554): 8.7e-180
Smith-Waterman score: 2657; 90.7% identity (96.9% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
::: :: ::::::::::::::::::::::::::::::.::::: :::::::..:::::::
CCDS59 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
:::::::.::::::::::::::.:::::::::::::.::::::::::::::.::::::::
CCDS59 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
::::: ::::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS59 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
:::::::::::::::::::::::::::::.::::::::::::::::.::.: :.:::.::
CCDS59 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
:: :::.: ::::::::::::..:.: :::::::::::::::::::::::: . ::.::
CCDS59 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
::::::::::::::::::.::::::::::::::::::::::.:::::.:::::::::.::
CCDS59 DEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKP
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
::..:::.::::::::::::::::::::::.::::::::::: :::::::::::::::
CCDS59 KPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
370 380 390 400 410
>>CCDS63000.1 ACTR3 gene_id:10096|Hs108|chr2 (367 aa)
initn: 2491 init1: 2491 opt: 2491 Z-score: 3133.3 bits: 588.6 E(32554): 3.3e-168
Smith-Waterman score: 2491; 100.0% identity (100.0% similar) in 367 aa overlap (52-418:1-367)
30 40 50 60 70 80
pF1KB6 AGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHG
::::::::::::::::::::::::::::::
CCDS63 MKGVDDLDFFIGDEAIEKPTYATKWPIRHG
10 20 30
90 100 110 120 130 140
pF1KB6 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINA
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG
280 290 300 310 320 330
390 400 410
pF1KB6 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:::::::::::::::::::::::::::::::::::::
CCDS63 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
340 350 360
>>CCDS34782.1 ACTR3B gene_id:57180|Hs108|chr7 (348 aa)
initn: 2202 init1: 1996 opt: 1996 Z-score: 2511.1 bits: 473.4 E(32554): 1.5e-133
Smith-Waterman score: 2066; 75.6% identity (80.1% similar) in 418 aa overlap (1-418:1-348)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
::: :: ::::::::::::::::::::::::::::::.::::: :::::::..:::::::
CCDS34 MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
:::::::.::::::::::::::.:::::::::::::.::::::::::::::.::::::::
CCDS34 FIGDEAIDKPTYATKWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
::::: ::::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS34 ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
:::::::::::::::::::::::::::::.::::::::::::::::.::.: :.:::.::
CCDS34 AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
:: :::.: ::::::::::::..:.: :::::::::::::::::::::::: . ::.::
CCDS34 EFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
:::::::::::::::::
CCDS34 DEVIQNCPIDVRRPLYK-------------------------------------------
310
370 380 390 400 410
pF1KB6 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:::.::::::::::: :::::::::::::::
CCDS34 ---------------------------PEFFQVCHTKKDYEEYGPSICRHNPVFGVMS
320 330 340
>>CCDS47744.1 ACTR3C gene_id:653857|Hs108|chr7 (210 aa)
initn: 1146 init1: 1146 opt: 1146 Z-score: 1445.4 bits: 275.4 E(32554): 3.5e-74
Smith-Waterman score: 1146; 89.4% identity (95.7% similar) in 188 aa overlap (130-317:1-188)
100 110 120 130 140 150
pF1KB6 YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVG
::::::::::::::::::::::::::::::
CCDS47 MFESFNVPGLYIAVQAVLALAASWTSRQVG
10 20 30
160 170 180 190 200 210
pF1KB6 ERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQ
:::::: :::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS47 ERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQ
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB6 SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGP
:::::::.::.: :.:::.:::: :::.: .::::::::::::..:.: :::::::::::
CCDS47 SLETAKAIKEKYCYICPDIVKEFAKYDVDPQKWIKQYTGINAINQKKFVIDVGYERFLGP
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB6 EIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDL
:::::::::::: . ::.:::::::::::::::::::
CCDS47 EIFFHPEFANPDSMESISDVVDEVIQNCPIDVRRPLYKMEQIPLSYPQGHGFHPLSPPFH
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB6 KRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKD
>>CCDS46307.1 ACTR2 gene_id:10097|Hs108|chr2 (399 aa)
initn: 614 init1: 206 opt: 666 Z-score: 837.5 bits: 163.9 E(32554): 2.5e-40
Smith-Waterman score: 715; 34.3% identity (64.7% similar) in 408 aa overlap (3-404:5-387)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIA---IKESAKVGDQAQRRVMKGV
:: . : : :::..: ::::.. :. :.:. .. :. ..:::. .:.
CCDS46 MDSQGR-KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIE----IKNN
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DDLDFFIGDEAIE-KPTYATKWPIRHGIVEDWDLMERFMEQVIF-KYLRAEPEDHYFLLT
.:...:::: : . ...:...:::..:: :... . .. . : . .. .:::
CCDS46 KKMDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDG
:::.: .::: .:.:::... :.:.:.::::.: : . :::.:.:::::
CCDS46 EPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDG
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSY
:::. :: ::. . ... ::::::: .. .:: : .. ..::.. .::. :
CCDS46 VTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFT
: .. .: .: . . ...:: .. : :: ::: .:: .:.:.. : . .
CCDS46 VGYNIEQE-QKLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB6 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEEL
..:.. ..:: ::.: .::.:::::::::. . ::.:.::. : : . :
CCDS46 G-VAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ-----LYLERVL
290 300 310 320 330
360 370 380 390 400 410
pF1KB6 SGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST-PEFYQVCHTKKDYEEIGPSICRHNP
.: : . . ... ... :..::..::. . . :...:.: :
CCDS46 KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLG
340 350 360 370 380 390
pF1KB6 VFGVMS
CCDS46 VTVR
>>CCDS1881.1 ACTR2 gene_id:10097|Hs108|chr2 (394 aa)
initn: 635 init1: 206 opt: 592 Z-score: 744.5 bits: 146.7 E(32554): 3.8e-35
Smith-Waterman score: 702; 34.1% identity (64.2% similar) in 408 aa overlap (3-404:5-382)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIA---IKESAKVGDQAQRRVMKGV
:: . : : :::..: ::::.. :. :.:. .. :. ..:::. .
CCDS18 MDSQGR-KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGN---------I
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DDLDFFIGDEAIE-KPTYATKWPIRHGIVEDWDLMERFMEQVIF-KYLRAEPEDHYFLLT
. :...:::: : . ...:...:::..:: :... . .. . : . .. .:::
CCDS18 EIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDG
:::.: .::: .:.:::... :.:.:.::::.: : . :::.:.:::::
CCDS18 EPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDG
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSY
:::. :: ::. . ... ::::::: .. .:: : .. ..::.. .::. :
CCDS18 VTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFT
: .. .: .: . . ...:: .. : :: ::: .:: .:.:.. : . .
CCDS18 VGYNIEQE-QKLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEEL
..:.. ..:: ::.: .::.:::::::::. . ::.:.::. : : . :
CCDS18 G-VAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ-----LYLERVL
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB6 SGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST-PEFYQVCHTKKDYEEIGPSICRHNP
.: : . . ... ... :..::..::. . . :...:.: :
CCDS18 KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLG
340 350 360 370 380 390
pF1KB6 VFGVMS
CCDS18 VTVR
>>CCDS5341.1 ACTB gene_id:60|Hs108|chr7 (375 aa)
initn: 812 init1: 295 opt: 590 Z-score: 742.3 bits: 146.2 E(32554): 5e-35
Smith-Waterman score: 845; 37.3% identity (62.7% similar) in 415 aa overlap (1-414:1-375)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
: . : ::: :.:. : :.::. :. ..:: :: .. :: :. . :
CCDS53 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110
pF1KB6 FIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNT
..:::: : : :.::.:::: .:: ::.. ...... ::. ::.: :::: :::
CCDS53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 PENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIP
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..:
CCDS53 KANREKMTQIMFETFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHTVP
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV
. :::.. : .. .::::.: .....: .: .. : .. .::. :: :.
CCDS53 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEV
.:. .. :. :.: .. : .: ::: :: .:.: : . . . : :.
CCDS53 QEMATAASS-SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-SCGIHET
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK
. . :..: .:.:. :: : :::::.::. .. :.:... :
CCDS53 TFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LA
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 PKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
CCDS53 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF
330 340 350 360 370
>>CCDS11782.1 ACTG1 gene_id:71|Hs108|chr17 (375 aa)
initn: 735 init1: 295 opt: 590 Z-score: 742.3 bits: 146.2 E(32554): 5e-35
Smith-Waterman score: 845; 37.1% identity (62.9% similar) in 415 aa overlap (1-414:1-375)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
: .. : :.: :.:. : :.::. :. ..:: :: .. :: :. . :
CCDS11 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110
pF1KB6 FIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNT
..:::: : : :.::.:::: .:: ::.. ...... ::. ::.: :::: :::
CCDS11 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 PENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIP
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..:
CCDS11 KANREKMTQIMFETFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHTVP
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV
. :::.. : .. .::::.: .....: .: .. : .. .::. :: :.
CCDS11 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEV
.:. .. :. :.: .. : .: ::: :: .:.: : . . . : :.
CCDS11 QEMATAASS-SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-SCGIHET
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK
. . :..: .:.:. :: : :::::.::. .. :.:... :
CCDS11 TFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LA
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 PKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
CCDS11 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF
330 340 350 360 370
>>CCDS34163.1 ACTBL2 gene_id:345651|Hs108|chr5 (376 aa)
initn: 732 init1: 285 opt: 582 Z-score: 732.2 bits: 144.3 E(32554): 1.8e-34
Smith-Waterman score: 836; 37.0% identity (63.3% similar) in 411 aa overlap (5-414:6-376)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLD
: : ::: :.:. : :..:. :. ..:: : : .. :: :. . :
CCDS34 MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMI--------GRPRHQGVMVGMGQKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 FFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLN
..:::: : : :.::.::.: .:: ::.. ..... ::. :..: .:::: :::
CCDS34 CYVGDEAQSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 TPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVI
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..
CCDS34 PKINREKMTQIMFEAFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHIV
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 PVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDL
:. :::.. : .. .::::.: .....: .: .. : .. :::. :: :.
CCDS34 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISE
.:. . ...: ..: .. : .: ::: :: .:.: : . . .. : :
CCDS34 EQEMVRAAASSSPE-RSYELPDGQV-----ITIGNERFRCPEAIFQPSFLGIE-SSGIHE
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRL
.. . :..: .:.:. :: : ::::::::. .. :.:... :
CCDS34 TTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIIT----------------L
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :: : : :
CCDS34 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIV-HRKCF
330 340 350 360 370
418 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:12:55 2016 done: Sat Nov 5 11:12:55 2016
Total Scan time: 1.830 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]