Result of FASTA (omim) for
pF1KB6639
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6639, 418 aa
1>>>pF1KB6639 418 - 418 aa - 418 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9339+/-0.00041; mu= 18.9951+/- 0.025
mean_var=61.7451+/-12.695, 0's: 0 Z-trim(111.2): 47 B-trim: 468 in 1/49
Lambda= 0.163220
statistics sampled from 19701 (19744) to 19701 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.231), width: 16
Scan time: 6.480
The best scores are: opt bits E(85289)
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 2839 677.4 1.8e-194
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 2491 595.4 7.6e-170
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 666 165.7 1.9e-40
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 592 148.3 3.3e-35
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 590 147.8 4.4e-35
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 590 147.8 4.4e-35
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 590 147.8 4.4e-35
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 582 145.9 1.6e-34
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 578 144.9 3.1e-34
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 578 144.9 3.1e-34
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 575 144.2 5.1e-34
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 575 144.2 5.1e-34
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 575 144.2 5.1e-34
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 575 144.2 5.1e-34
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 522 131.9 4.5e-30
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 522 132.0 6.2e-30
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 522 132.0 6.2e-30
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 522 132.1 6.8e-30
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 522 132.1 6.8e-30
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 501 126.8 8.9e-29
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 497 125.9 1.7e-28
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 489 124.0 5.7e-28
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 453 115.5 2.3e-25
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 439 112.2 2.2e-24
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 434 111.0 5e-24
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 431 110.3 6.9e-24
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 411 105.7 2.3e-22
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 403 103.8 8.7e-22
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 395 101.9 3.3e-21
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 386 99.7 1.2e-20
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 379 98.1 4.4e-20
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 348 90.8 6.4e-18
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 348 90.8 6.4e-18
>>NP_005712 (OMIM: 604222) actin-related protein 3 isofo (418 aa)
initn: 2839 init1: 2839 opt: 2839 Z-score: 3612.3 bits: 677.4 E(85289): 1.8e-194
Smith-Waterman score: 2839; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKP
310 320 330 340 350 360
370 380 390 400 410
pF1KB6 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
370 380 390 400 410
>>NP_001264069 (OMIM: 604222) actin-related protein 3 is (367 aa)
initn: 2491 init1: 2491 opt: 2491 Z-score: 3170.3 bits: 595.4 E(85289): 7.6e-170
Smith-Waterman score: 2491; 100.0% identity (100.0% similar) in 367 aa overlap (52-418:1-367)
30 40 50 60 70 80
pF1KB6 AGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHG
::::::::::::::::::::::::::::::
NP_001 MKGVDDLDFFIGDEAIEKPTYATKWPIRHG
10 20 30
90 100 110 120 130 140
pF1KB6 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINA
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGG
280 290 300 310 320 330
390 400 410
pF1KB6 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:::::::::::::::::::::::::::::::::::::
NP_001 SMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
340 350 360
>>NP_001005386 (OMIM: 604221) actin-related protein 2 is (399 aa)
initn: 614 init1: 206 opt: 666 Z-score: 847.2 bits: 165.7 E(85289): 1.9e-40
Smith-Waterman score: 715; 34.3% identity (64.7% similar) in 408 aa overlap (3-404:5-387)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIA---IKESAKVGDQAQRRVMKGV
:: . : : :::..: ::::.. :. :.:. .. :. ..:::. .:.
NP_001 MDSQGR-KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIE----IKNN
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DDLDFFIGDEAIE-KPTYATKWPIRHGIVEDWDLMERFMEQVIF-KYLRAEPEDHYFLLT
.:...:::: : . ...:...:::..:: :... . .. . : . .. .:::
NP_001 KKMDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDG
:::.: .::: .:.:::... :.:.:.::::.: : . :::.:.:::::
NP_001 EPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDG
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSY
:::. :: ::. . ... ::::::: .. .:: : .. ..::.. .::. :
NP_001 VTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFT
: .. .: .: . . ...:: .. : :: ::: .:: .:.:.. : . .
NP_001 VGYNIEQE-QKLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB6 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEEL
..:.. ..:: ::.: .::.:::::::::. . ::.:.::. : : . :
NP_001 G-VAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ-----LYLERVL
290 300 310 320 330
360 370 380 390 400 410
pF1KB6 SGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST-PEFYQVCHTKKDYEEIGPSICRHNP
.: : . . ... ... :..::..::. . . :...:.: :
NP_001 KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLG
340 350 360 370 380 390
pF1KB6 VFGVMS
NP_001 VTVR
>>NP_005713 (OMIM: 604221) actin-related protein 2 isofo (394 aa)
initn: 635 init1: 206 opt: 592 Z-score: 753.1 bits: 148.3 E(85289): 3.3e-35
Smith-Waterman score: 702; 34.1% identity (64.2% similar) in 408 aa overlap (3-404:5-382)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIA---IKESAKVGDQAQRRVMKGV
:: . : : :::..: ::::.. :. :.:. .. :. ..:::. .
NP_005 MDSQGR-KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGN---------I
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DDLDFFIGDEAIE-KPTYATKWPIRHGIVEDWDLMERFMEQVIF-KYLRAEPEDHYFLLT
. :...:::: : . ...:...:::..:: :... . .. . : . .. .:::
NP_005 EIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDG
:::.: .::: .:.:::... :.:.:.::::.: : . :::.:.:::::
NP_005 EPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDG
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSY
:::. :: ::. . ... ::::::: .. .:: : .. ..::.. .::. :
NP_005 VTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFT
: .. .: .: . . ...:: .. : :: ::: .:: .:.:.. : . .
NP_005 VGYNIEQE-QKLALETTVLVESYTLPDG-----RIIKVGGERFEAPEALFQPHLINVEGV
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 QPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEEL
..:.. ..:: ::.: .::.:::::::::. . ::.:.::. : : . :
NP_005 G-VAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ-----LYLERVL
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB6 SGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST-PEFYQVCHTKKDYEEIGPSICRHNP
.: : . . ... ... :..::..::. . . :...:.: :
NP_005 KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLG
340 350 360 370 380 390
pF1KB6 VFGVMS
NP_005 VTVR
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 812 init1: 295 opt: 590 Z-score: 750.9 bits: 147.8 E(85289): 4.4e-35
Smith-Waterman score: 845; 37.3% identity (62.7% similar) in 415 aa overlap (1-414:1-375)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
: . : ::: :.:. : :.::. :. ..:: :: .. :: :. . :
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110
pF1KB6 FIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNT
..:::: : : :.::.:::: .:: ::.. ...... ::. ::.: :::: :::
NP_001 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 PENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIP
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..:
NP_001 KANREKMTQIMFETFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHTVP
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV
. :::.. : .. .::::.: .....: .: .. : .. .::. :: :.
NP_001 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEV
.:. .. :. :.: .. : .: ::: :: .:.: : . . . : :.
NP_001 QEMATAASS-SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-SCGIHET
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK
. . :..: .:.:. :: : :::::.::. .. :.:... :
NP_001 TFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LA
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 PKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
NP_001 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF
330 340 350 360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 735 init1: 295 opt: 590 Z-score: 750.9 bits: 147.8 E(85289): 4.4e-35
Smith-Waterman score: 845; 37.1% identity (62.9% similar) in 415 aa overlap (1-414:1-375)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
: .. : :.: :.:. : :.::. :. ..:: :: .. :: :. . :
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110
pF1KB6 FIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNT
..:::: : : :.::.:::: .:: ::.. ...... ::. ::.: :::: :::
NP_001 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 PENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIP
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..:
NP_001 KANREKMTQIMFETFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHTVP
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV
. :::.. : .. .::::.: .....: .: .. : .. .::. :: :.
NP_001 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEV
.:. .. :. :.: .. : .: ::: :: .:.: : . . . : :.
NP_001 QEMATAASS-SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-SCGIHET
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK
. . :..: .:.:. :: : :::::.::. .. :.:... :
NP_001 TFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LA
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 PKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
NP_001 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF
330 340 350 360 370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 735 init1: 295 opt: 590 Z-score: 750.9 bits: 147.8 E(85289): 4.4e-35
Smith-Waterman score: 845; 37.1% identity (62.9% similar) in 415 aa overlap (1-414:1-375)
10 20 30 40 50 60
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDF
: .. : :.: :.:. : :.::. :. ..:: :: .. :: :. . :
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110
pF1KB6 FIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNT
..:::: : : :.::.:::: .:: ::.. ...... ::. ::.: :::: :::
NP_001 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 PENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIP
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..:
NP_001 KANREKMTQIMFETFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHTVP
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV
. :::.. : .. .::::.: .....: .: .. : .. .::. :: :.
NP_001 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEV
.:. .. :. :.: .. : .: ::: :: .:.: : . . . : :.
NP_001 QEMATAASS-SSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-SCGIHET
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK
. . :..: .:.:. :: : :::::.::. .. :.:... :
NP_001 TFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LA
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 PKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
NP_001 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF
330 340 350 360 370
>>NP_001017992 (OMIM: 614835) beta-actin-like protein 2 (376 aa)
initn: 732 init1: 285 opt: 582 Z-score: 740.7 bits: 145.9 E(85289): 1.6e-34
Smith-Waterman score: 836; 37.0% identity (63.3% similar) in 411 aa overlap (5-414:6-376)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLD
: : ::: :.:. : :..:. :. ..:: : : .. :: :. . :
NP_001 MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMI--------GRPRHQGVMVGMGQKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 FFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLN
..:::: : : :.::.::.: .:: ::.. ..... ::. :..: .:::: :::
NP_001 CYVGDEAQSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 TPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVI
::: ..::::.::.:..:.:.::::.: :: : :: :: :.::::::::..
NP_001 PKINREKMTQIMFEAFNTPAMYVAIQAVLSLYAS------G-RT-TGIVMDSGDGVTHIV
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 PVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDL
:. :::.. : .. .::::.: .....: .: .. : .. :::. :: :.
NP_001 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 VKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISE
.:. . ...: ..: .. : .: ::: :: .:.: : . . .. : :
NP_001 EQEMVRAAASSSPE-RSYELPDGQV-----ITIGNERFRCPEAIFQPSFLGIE-SSGIHE
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 VVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRL
.. . :..: .:.:. :: : ::::::::. .. :.:... :
NP_001 TTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIIT----------------L
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 KPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
:. . ...:. ..:.::.:::.::: : :. .:..:.: :: : : :
NP_001 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIV-HRKCF
330 340 350 360 370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 784 init1: 298 opt: 578 Z-score: 735.6 bits: 144.9 E(85289): 3.1e-34
Smith-Waterman score: 840; 37.7% identity (62.6% similar) in 409 aa overlap (7-414:9-377)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDL
: : : :.: .: :.::. :. ..:: :: .. :: :. .
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQK
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPL
: ..:::: : : :.::.:::. .:: ::.. ...... ::. ::.: :::: ::
NP_001 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 NTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHV
: ::: ..::::.::::..:.:.::::.: :: : :: :: :.::::::::
NP_001 NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS------G-RT-TGIVLDSGDGVTHN
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 IPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD
.:. :::.. : .. .::::.: .....: .: .. : .. .::. :: :
NP_001 VPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 LVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPIS
. .:. .. :. :.: .. : .: ::: :: .:.: : . . . :
NP_001 FENEMATAASS-SSLEKSYELPDGQ-----VITIGNERFRCPETLFQPSFIGME-SAGIH
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 EVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGR
:.. . :..: ::.:. :: : :.:::.::. .. :.:...
NP_001 ETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA----------------
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 LKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVM
: :. . ...:. ..:.::.:::.::: : :. ::..:.: :::: : :
NP_001 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIV-HRKCF
330 340 350 360 370
pF1KB6 S
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 760 init1: 298 opt: 578 Z-score: 735.6 bits: 144.9 E(85289): 3.1e-34
Smith-Waterman score: 839; 37.7% identity (62.6% similar) in 409 aa overlap (7-414:9-377)
10 20 30 40 50
pF1KB6 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDL
: : : :.: .: :.::. :. ..:: :: .. :: :. .
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQK
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPL
: ..:::: : : :.::.:::. .:: ::.. ...... ::. ::.: :::: ::
NP_005 DSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 NTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHV
: ::: ..::::.::::..:.:.::::.: :: : :: :: :.::::::::
NP_005 NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS------G-RT-TGIVLDSGDGVTHN
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 IPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD
.:. :::.. : .. .::::.: .....: .: .. : .. .::. :: :
NP_005 VPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 LVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPIS
. .:. .. :. :.: .. : .: ::: :: .:.: : . . . :
NP_005 FENEMATAASS-SSLEKSYELPDGQ-----VITIGNERFRCPETLFQPSFIGME-SAGIH
230 240 250 260 270
300 310 320 330 340 350
pF1KB6 EVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGR
:.. . :..: ::.:. :: : :::::.::. .. :.:...
NP_005 ETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITA----------------
280 290 300 310 320
360 370 380 390 400 410
pF1KB6 LKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVM
: :. . ...:. ..:.::.:::.::: : :. .:..:.: :::: : :
NP_005 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIV-HRKCF
330 340 350 360 370
pF1KB6 S
418 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:12:55 2016 done: Sat Nov 5 11:12:56 2016
Total Scan time: 6.480 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]