Result of FASTA (omim) for
pF1KB6643
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6643, 387 aa
1>>>pF1KB6643 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.9315+/-0.000437; mu= -9.7224+/- 0.027
mean_var=570.8817+/-118.708, 0's: 0 Z-trim(124.6): 222 B-trim: 1557 in 2/60
Lambda= 0.053679
statistics sampled from 46336 (46649) to 46336 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.547), width: 16
Scan time: 8.800
The best scores are: opt bits E(85289)
NP_005628 (OMIM: 600192) protein SSXT isoform 2 [H ( 387) 2899 238.6 1.8e-62
XP_011524454 (OMIM: 600192) PREDICTED: protein SSX ( 335) 2548 211.4 2.6e-54
NP_001007560 (OMIM: 600192) protein SSXT isoform 1 ( 418) 2371 197.8 4e-50
NP_001295130 (OMIM: 600192) protein SSXT isoform 3 ( 395) 2224 186.4 1e-46
XP_011524447 (OMIM: 600192) PREDICTED: protein SSX ( 395) 2224 186.4 1e-46
XP_011524451 (OMIM: 600192) PREDICTED: protein SSX ( 366) 2020 170.5 5.5e-42
XP_011524450 (OMIM: 600192) PREDICTED: protein SSX ( 366) 2020 170.5 5.5e-42
XP_011524449 (OMIM: 600192) PREDICTED: protein SSX ( 366) 2020 170.5 5.5e-42
XP_011524453 (OMIM: 600192) PREDICTED: protein SSX ( 366) 2020 170.5 5.5e-42
XP_011524452 (OMIM: 600192) PREDICTED: protein SSX ( 366) 2020 170.5 5.5e-42
XP_006722590 (OMIM: 600192) PREDICTED: protein SSX ( 336) 1826 155.5 1.7e-37
NP_945173 (OMIM: 606472) calcium-responsive transa ( 396) 825 78.0 4.2e-14
XP_005260446 (OMIM: 606472) PREDICTED: calcium-res ( 416) 825 78.1 4.3e-14
XP_016883273 (OMIM: 606472) PREDICTED: calcium-res ( 373) 724 70.2 9.1e-12
XP_011527066 (OMIM: 606472) PREDICTED: calcium-res ( 374) 724 70.2 9.1e-12
XP_005260448 (OMIM: 606472) PREDICTED: calcium-res ( 374) 724 70.2 9.1e-12
NP_001288707 (OMIM: 606472) calcium-responsive tra ( 265) 648 64.1 4.3e-10
XP_011527069 (OMIM: 606472) PREDICTED: calcium-res ( 399) 586 59.5 1.6e-08
NP_006239 (OMIM: 168810) basic salivary proline-ri ( 416) 460 49.8 1.4e-05
NP_005030 (OMIM: 180989) basic salivary proline-ri ( 331) 387 44.0 0.00061
NP_006240 (OMIM: 168840) basic salivary proline-ri ( 309) 360 41.9 0.0025
NP_624361 (OMIM: 603024,614607) AT-rich interactiv (2068) 365 43.3 0.0064
NP_006006 (OMIM: 603024,614607) AT-rich interactiv (2285) 365 43.3 0.0068
>>NP_005628 (OMIM: 600192) protein SSXT isoform 2 [Homo (387 aa)
initn: 2899 init1: 2899 opt: 2899 Z-score: 1242.3 bits: 238.6 E(85289): 1.8e-62
Smith-Waterman score: 2899; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
310 320 330 340 350 360
370 380
pF1KB6 PTQPGPPQPPQQRPYGYDQGQYGNYQQ
:::::::::::::::::::::::::::
NP_005 PTQPGPPQPPQQRPYGYDQGQYGNYQQ
370 380
>>XP_011524454 (OMIM: 600192) PREDICTED: protein SSXT is (335 aa)
initn: 2548 init1: 2548 opt: 2548 Z-score: 1096.2 bits: 211.4 E(85289): 2.6e-54
Smith-Waterman score: 2548; 100.0% identity (100.0% similar) in 335 aa overlap (53-387:1-335)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYP
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB6 GQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQY
280 290 300 310 320 330
pF1KB6 GNYQQ
:::::
XP_011 GNYQQ
>>NP_001007560 (OMIM: 600192) protein SSXT isoform 1 [Ho (418 aa)
initn: 2222 init1: 2222 opt: 2371 Z-score: 1021.0 bits: 197.8 E(85289): 4e-50
Smith-Waterman score: 2827; 92.6% identity (92.6% similar) in 418 aa overlap (1-387:1-418)
10 20 30 40 50 60
pF1KB6 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
250 260 270 280 290 300
300 310 320
pF1KB6 -------------------------NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
:::::::::::::::::::::::::::::::::::
NP_001 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB6 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
370 380 390 400 410
>>NP_001295130 (OMIM: 600192) protein SSXT isoform 3 [Ho (395 aa)
initn: 2075 init1: 2075 opt: 2224 Z-score: 959.7 bits: 186.4 E(85289): 1e-46
Smith-Waterman score: 2680; 92.2% identity (92.2% similar) in 395 aa overlap (24-387:1-395)
10 20 30 40 50 60
pF1KB6 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
:::::::::::::::::::::::::::::::::::::
NP_001 MLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
10 20 30
70 80 90 100 110 120
pF1KB6 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
220 230 240 250 260 270
300 310 320
pF1KB6 -------------------------NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
:::::::::::::::::::::::::::::::::::
NP_001 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
280 290 300 310 320 330
330 340 350 360 370 380
pF1KB6 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360 370 380 390
>>XP_011524447 (OMIM: 600192) PREDICTED: protein SSXT is (395 aa)
initn: 2075 init1: 2075 opt: 2224 Z-score: 959.7 bits: 186.4 E(85289): 1e-46
Smith-Waterman score: 2680; 92.2% identity (92.2% similar) in 395 aa overlap (24-387:1-395)
10 20 30 40 50 60
pF1KB6 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
:::::::::::::::::::::::::::::::::::::
XP_011 MLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
10 20 30
70 80 90 100 110 120
pF1KB6 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
220 230 240 250 260 270
300 310 320
pF1KB6 -------------------------NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
:::::::::::::::::::::::::::::::::::
XP_011 QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
280 290 300 310 320 330
330 340 350 360 370 380
pF1KB6 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360 370 380 390
>>XP_011524451 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 1871 init1: 1871 opt: 2020 Z-score: 874.7 bits: 170.5 E(85289): 5.5e-42
Smith-Waterman score: 2476; 91.5% identity (91.5% similar) in 366 aa overlap (53-387:1-366)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG----------------------------
::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 ---NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
280 290 300 310 320 330
360 370 380
pF1KB6 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360
>>XP_011524450 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 1871 init1: 1871 opt: 2020 Z-score: 874.7 bits: 170.5 E(85289): 5.5e-42
Smith-Waterman score: 2476; 91.5% identity (91.5% similar) in 366 aa overlap (53-387:1-366)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG----------------------------
::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 ---NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
280 290 300 310 320 330
360 370 380
pF1KB6 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360
>>XP_011524449 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 1871 init1: 1871 opt: 2020 Z-score: 874.7 bits: 170.5 E(85289): 5.5e-42
Smith-Waterman score: 2476; 91.5% identity (91.5% similar) in 366 aa overlap (53-387:1-366)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG----------------------------
::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 ---NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
280 290 300 310 320 330
360 370 380
pF1KB6 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360
>>XP_011524453 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 1871 init1: 1871 opt: 2020 Z-score: 874.7 bits: 170.5 E(85289): 5.5e-42
Smith-Waterman score: 2476; 91.5% identity (91.5% similar) in 366 aa overlap (53-387:1-366)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG----------------------------
::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 ---NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
280 290 300 310 320 330
360 370 380
pF1KB6 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360
>>XP_011524452 (OMIM: 600192) PREDICTED: protein SSXT is (366 aa)
initn: 1871 init1: 1871 opt: 2020 Z-score: 874.7 bits: 170.5 E(85289): 5.5e-42
Smith-Waterman score: 2476; 91.5% identity (91.5% similar) in 366 aa overlap (53-387:1-366)
30 40 50 60 70 80
pF1KB6 KMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQN
::::::::::::::::::::::::::::::
XP_011 MLHTNLVYLATIADSNQNMQSLLPAPPTQN
10 20 30
90 100 110 120 130 140
pF1KB6 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB6 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB6 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQ
160 170 180 190 200 210
270 280 290
pF1KB6 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDG----------------------------
::::::::::::::::::::::::::::::::
XP_011 QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYY
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB6 ---NSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQG
280 290 300 310 320 330
360 370 380
pF1KB6 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
::::::::::::::::::::::::::::::::::::
XP_011 QGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
340 350 360
387 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:13:33 2016 done: Sat Nov 5 11:13:34 2016
Total Scan time: 8.800 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]