Result of FASTA (omim) for
pF1KB6667
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6667, 425 aa
1>>>pF1KB6667 425 - 425 aa - 425 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2107+/-0.000361; mu= 9.1737+/- 0.023
mean_var=126.7944+/-24.567, 0's: 0 Z-trim(117.3): 16 B-trim: 0 in 0/56
Lambda= 0.113900
statistics sampled from 29176 (29192) to 29176 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.342), width: 16
Scan time: 9.220
The best scores are: opt bits E(85289)
NP_004171 (OMIM: 603893) TRAF family member-associ ( 425) 2860 481.1 2.3e-135
NP_001186064 (OMIM: 603893) TRAF family member-ass ( 425) 2860 481.1 2.3e-135
XP_016858585 (OMIM: 603893) PREDICTED: TRAF family ( 425) 2860 481.1 2.3e-135
XP_016858586 (OMIM: 603893) PREDICTED: TRAF family ( 425) 2860 481.1 2.3e-135
XP_016858584 (OMIM: 603893) PREDICTED: TRAF family ( 448) 2860 481.1 2.4e-135
XP_005246264 (OMIM: 603893) PREDICTED: TRAF family ( 451) 2860 481.1 2.4e-135
XP_016858583 (OMIM: 603893) PREDICTED: TRAF family ( 472) 2860 481.2 2.5e-135
XP_016858582 (OMIM: 603893) PREDICTED: TRAF family ( 483) 2860 481.2 2.5e-135
NP_597841 (OMIM: 603893) TRAF family member-associ ( 119) 706 126.8 2.8e-29
XP_005265449 (OMIM: 609916) PREDICTED: 5-azacytidi ( 392) 196 43.4 0.0013
NP_071906 (OMIM: 609916) 5-azacytidine-induced pro ( 392) 196 43.4 0.0013
XP_011532311 (OMIM: 609916) PREDICTED: 5-azacytidi ( 395) 196 43.4 0.0013
>>NP_004171 (OMIM: 603893) TRAF family member-associated (425 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.4 bits: 481.1 E(85289): 2.3e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)
10 20 30 40 50 60
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
370 380 390 400 410 420
pF1KB6 FNGET
:::::
NP_004 FNGET
>>NP_001186064 (OMIM: 603893) TRAF family member-associa (425 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.4 bits: 481.1 E(85289): 2.3e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)
10 20 30 40 50 60
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
370 380 390 400 410 420
pF1KB6 FNGET
:::::
NP_001 FNGET
>>XP_016858585 (OMIM: 603893) PREDICTED: TRAF family mem (425 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.4 bits: 481.1 E(85289): 2.3e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)
10 20 30 40 50 60
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
370 380 390 400 410 420
pF1KB6 FNGET
:::::
XP_016 FNGET
>>XP_016858586 (OMIM: 603893) PREDICTED: TRAF family mem (425 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.4 bits: 481.1 E(85289): 2.3e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)
10 20 30 40 50 60
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLCRDEEDTSFESLSKFNVKFPPMD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNPGNFVKTEETLFEIQGIDPIASAI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNALYVNSFPLLDPSDAPFPSLDSPGK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCEFCQAVFPPSITSRGDFLRHLNSH
370 380 390 400 410 420
pF1KB6 FNGET
:::::
XP_016 FNGET
>>XP_016858584 (OMIM: 603893) PREDICTED: TRAF family mem (448 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.0 bits: 481.1 E(85289): 2.4e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:24-448)
10 20 30
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENY
:::::::::::::::::::::::::::::::::::::
XP_016 MKESGTRPVIYSILYSDATGRRGMDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENY
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 EQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 VISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 AQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 CRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFNMEFRDNP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 GNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDHNAL
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB6 YVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPRVCE
370 380 390 400 410 420
400 410 420
pF1KB6 FCQAVFPPSITSRGDFLRHLNSHFNGET
::::::::::::::::::::::::::::
XP_016 FCQAVFPPSITSRGDFLRHLNSHFNGET
430 440
>>XP_005246264 (OMIM: 603893) PREDICTED: TRAF family mem (451 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2551.0 bits: 481.1 E(85289): 2.4e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:27-451)
10 20 30
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKT
::::::::::::::::::::::::::::::::::
XP_005 MGVEGPAVSRPVIYSILYSDATGRRGMDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKT
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 ENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 QDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICM
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 LAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTP
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 RGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFNMEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFNMEFR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB6 DNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDH
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB6 NALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHIPR
370 380 390 400 410 420
400 410 420
pF1KB6 VCEFCQAVFPPSITSRGDFLRHLNSHFNGET
:::::::::::::::::::::::::::::::
XP_005 VCEFCQAVFPPSITSRGDFLRHLNSHFNGET
430 440 450
>>XP_016858583 (OMIM: 603893) PREDICTED: TRAF family mem (472 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2550.7 bits: 481.2 E(85289): 2.5e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:48-472)
10 20 30
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKEL
::::::::::::::::::::::::::::::
XP_016 THNFFFMDKEKCCRPVIYSILYSDATGRRGMDKNIGEQLNKAYEAFRQACMDRDSAVKEL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 QQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLT
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 LDQPQDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDQPQDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFH
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 KICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSIT
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB6 SVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFN
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB6 MEFRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEFRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLP
320 330 340 350 360 370
340 350 360 370 380 390
pF1KB6 PGDHNALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGDHNALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSEL
380 390 400 410 420 430
400 410 420
pF1KB6 HIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET
:::::::::::::::::::::::::::::::::::
XP_016 HIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET
440 450 460 470
>>XP_016858582 (OMIM: 603893) PREDICTED: TRAF family mem (483 aa)
initn: 2860 init1: 2860 opt: 2860 Z-score: 2550.5 bits: 481.2 E(85289): 2.5e-135
Smith-Waterman score: 2860; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:59-483)
10 20 30
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKEL
::::::::::::::::::::::::::::::
XP_016 LPSYRGWNTHPNERPVIYSILYSDATGRRGMDKNIGEQLNKAYEAFRQACMDRDSAVKEL
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB6 QQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLT
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB6 LDQPQDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDQPQDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFH
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB6 KICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSIT
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB6 SVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQEKFN
270 280 290 300 310 320
280 290 300 310 320 330
pF1KB6 MEFRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEFRDNPGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLP
330 340 350 360 370 380
340 350 360 370 380 390
pF1KB6 PGDHNALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGDHNALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSEL
390 400 410 420 430 440
400 410 420
pF1KB6 HIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET
:::::::::::::::::::::::::::::::::::
XP_016 HIPRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET
450 460 470 480
>>NP_597841 (OMIM: 603893) TRAF family member-associated (119 aa)
initn: 706 init1: 706 opt: 706 Z-score: 646.6 bits: 126.8 E(85289): 2.8e-29
Smith-Waterman score: 706; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KB6 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRK
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 QLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVDIASAESSI
70 80 90 100 110
130 140 150 160 170 180
pF1KB6 ETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATETQCSVP
>>XP_005265449 (OMIM: 609916) PREDICTED: 5-azacytidine-i (392 aa)
initn: 144 init1: 118 opt: 196 Z-score: 186.0 bits: 43.4 E(85289): 0.0013
Smith-Waterman score: 196; 23.9% identity (63.3% similar) in 188 aa overlap (4-185:83-264)
10 20 30
pF1KB6 MDKNIG-EQLNKAYEAFRQACMDRDSAVKELQQ
..: ::.::::.:.:..:.:::. ..:..
XP_005 KDSEKENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDK
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB6 KTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLD
... . .. .:::. ... . .:.... ::. . : . :..: . :
XP_005 MNKDNSESLKVLNEQLQSKEVELLQLRTEV----ETQQVMRNLNPPSSNWEVEKLSCDLK
120 130 140 150 160
100 110 120 130 140
pF1KB6 -QPQDKVISGIAREKLP-KVRRQEV--SSPRKETSARSLGSPLLH-ERGNIEKTFWDLKE
. .. . . .: :.. :.. ..: .: . .: : :.....:.::.
XP_005 IHGLEQELELMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKR
170 180 190 200 210 220
150 160 170 180 190 200
pF1KB6 EFHKICMLAKAQKDHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAP
:. .. .....: . : ::. .:: . :. :. :..
XP_005 EMSNLHLVTQVQAELLRKLKT-STAIKKACA-PVGCSEDLGRDSTKLHLMNFTATYTRHP
230 240 250 260 270 280
210 220 230 240 250 260
pF1KB6 SITSVTPRGLCRDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEAVCQE
XP_005 PLLPNGKALCHTTSSPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLED
290 300 310 320 330 340
425 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:07:52 2016 done: Sat Nov 5 20:07:54 2016
Total Scan time: 9.220 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]