FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6753, 105 aa
  1>>>pF1KB6753 105 - 105 aa - 105 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8781+/-0.000812; mu= 11.5549+/- 0.049
 mean_var=66.6856+/-13.493, 0's: 0 Z-trim(107.7): 52  B-trim: 356 in 1/48
 Lambda= 0.157057
 statistics sampled from 9709 (9757) to 9709 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.3), width:  16
 Scan time:  1.190

The best scores are:                                      opt bits E(32554)
CCDS1009.1 S100A11 gene_id:6282|Hs108|chr1         ( 105)  680 162.3 4.9e-41
CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1          (  94)  265 68.2 9.2e-13
CCDS1008.1 S100A10 gene_id:6281|Hs108|chr1         (  97)  254 65.8 5.3e-12
CCDS3391.1 S100P gene_id:6286|Hs108|chr4           (  95)  250 64.9 9.8e-12
CCDS43333.1 S100Z gene_id:170591|Hs108|chr5        (  99)  241 62.8 4.1e-11
CCDS13736.1 S100B gene_id:6285|Hs108|chr21         (  92)  237 61.9 7.3e-11


>>CCDS1009.1 S100A11 gene_id:6282|Hs108|chr1              (105 aa)
 initn: 680 init1: 680 opt: 680  Z-score: 850.2  bits: 162.3 E(32554): 4.9e-41
Smith-Waterman score: 680; 100.0% identity (100.0% similar) in 105 aa overlap (1-105:1-105)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
               10        20        30        40        50        60

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
               70        80        90       100     

>>CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1               (94 aa)
 initn: 258 init1: 244 opt: 265  Z-score: 342.6  bits: 68.2 E(32554): 9.2e-13
Smith-Waterman score: 265; 43.2% identity (79.5% similar) in 88 aa overlap (8-95:3-90)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
              .: :  .:.:: ::. ..::.: .: ::: :.  ...:::..:   :::  ..
CCDS10      MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :..::.:: :.::..::.:.. :...:..::.. :          
CCDS10 DKVMKELDENGDGEVDFQEYVVLVAALTVACNNFFWENS      
          60        70        80        90          

>>CCDS1008.1 S100A10 gene_id:6281|Hs108|chr1              (97 aa)
 initn: 235 init1: 163 opt: 254  Z-score: 329.0  bits: 65.8 E(32554): 5.3e-12
Smith-Waterman score: 254; 40.0% identity (75.6% similar) in 90 aa overlap (7-96:2-88)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             :.. :. .:... .:.:.::  ::   :.: ..  .:. :. .: .::::: ..
CCDS10      MPSQMEHAMETMMFTFHKFAGDKGY---LTKEDLRVLMEKEFPGFLENQKDPLAV
                    10        20           30        40        50  

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :..:: ::   ::.. :. :..::.::..::.: :.         
CCDS10 DKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQKGKK
             60        70        80        90       

>>CCDS3391.1 S100P gene_id:6286|Hs108|chr4                (95 aa)
 initn: 250 init1: 250 opt: 250  Z-score: 324.2  bits: 64.9 E(32554): 9.8e-12
Smith-Waterman score: 250; 40.7% identity (74.7% similar) in 91 aa overlap (8-98:2-92)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
              :: :  .  .: ::..:.:..: . ::.: :.  .:. :: .: .. ::  ..
CCDS33       MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAV
                     10        20        30        40        50    

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :...: ::.:.:.:.:::::. ...... :::  : ::       
CCDS33 DKLLKDLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK    
           60        70        80        90         

>>CCDS43333.1 S100Z gene_id:170591|Hs108|chr5             (99 aa)
 initn: 256 init1: 241 opt: 241  Z-score: 312.9  bits: 62.8 E(32554): 4.1e-11
Smith-Waterman score: 241; 31.6% identity (76.5% similar) in 98 aa overlap (7-104:2-99)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
             ::. :  ....: .:..:.::.   . ::: :.  ... ::. : . ::.  ..
CCDS43      MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLV
                    10        20        30        40        50     

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :.... ::.:.:...::.::. ....:..::.: :.. . .. . 
CCDS43 DKIVQDLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK 
          60        70        80        90          

>>CCDS13736.1 S100B gene_id:6285|Hs108|chr21              (92 aa)
 initn: 231 init1: 222 opt: 237  Z-score: 308.5  bits: 61.9 E(32554): 7.3e-11
Smith-Waterman score: 237; 36.4% identity (78.4% similar) in 88 aa overlap (8-95:2-89)

               10        20        30        40        50        60
pF1KB6 MAKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVL
              .: :. . .:: ::..:.:..: .. :.:.:.  ..:.::. : .. :.  :.
CCDS13       MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVV
                     10        20        30        40        50    

               70        80        90       100     
pF1KB6 DRMMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
       :..:. ::...::. ::.::. ... .. :::. :          
CCDS13 DKVMETLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE       
           60        70        80        90         




105 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:48:51 2016 done: Fri Nov  4 23:48:52 2016
 Total Scan time:  1.190 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]