Result of FASTA (ccds) for
pF1KB6768
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6768, 148 aa
1>>>pF1KB6768 148 - 148 aa - 148 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3287+/-0.000767; mu= 11.9712+/- 0.046
mean_var=77.4053+/-15.014, 0's: 0 Z-trim(110.0): 26 B-trim: 8 in 1/52
Lambda= 0.145777
statistics sampled from 11274 (11291) to 11274 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.734), E-opt: 0.2 (0.347), width: 16
Scan time: 1.680
The best scores are: opt bits E(32554)
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12 ( 148) 1057 231.0 2.1e-61
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1 ( 144) 338 79.7 6.9e-16
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1 ( 145) 325 77.0 4.6e-15
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16 ( 165) 314 74.7 2.5e-14
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1 ( 142) 308 73.4 5.4e-14
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1 ( 211) 304 72.7 1.3e-13
CCDS47919.1 OC90 gene_id:729330|Hs108|chr8 ( 477) 269 65.6 4.1e-11
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1 ( 138) 262 63.7 4.3e-11
>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12 (148 aa)
initn: 1057 init1: 1057 opt: 1057 Z-score: 1215.8 bits: 231.0 E(32554): 2.1e-61
Smith-Waterman score: 1057; 100.0% identity (100.0% similar) in 148 aa overlap (1-148:1-148)
10 20 30 40 50 60
pF1KB6 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 DELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNC
70 80 90 100 110 120
130 140
pF1KB6 DRNAAICFSKAPYNKAHKNLDTKKYCQS
::::::::::::::::::::::::::::
CCDS91 DRNAAICFSKAPYNKAHKNLDTKKYCQS
130 140
>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1 (144 aa)
initn: 316 init1: 197 opt: 338 Z-score: 398.7 bits: 79.7 E(32554): 6.9e-16
Smith-Waterman score: 338; 39.5% identity (65.8% similar) in 152 aa overlap (1-147:1-138)
10 20 30 40 50
pF1KB6 MK-LLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTP
:: ::.:::.. . .. . . .:..::: . :.. : :. :::.::.:: :.:
CCDS20 MKTLLLLAVIMIFGLLQAHGN---LVNFHRMIK-LTTGKEAALSYGFYGCHCGVGGRGSP
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 VDELDKCCQTHDNCYDQAKKLDSC--KFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFI
: :.:: ::: :: . .: .: ::: .:..: ::: :::. :. :.. .
CCDS20 KDATDRCCVTHDCCYKRLEK-RGCGTKFL-------SYKFSNSGSRITCA-KQDSCRSQL
60 70 80 90 100
120 130 140
pF1KB6 CNCDRNAAICFS--KAPYNKAHKNLDTKKYCQS
:.::. :: ::. :. ::: .. ..:.:.
CCDS20 CECDKAAATCFARNKTTYNKKYQYY-SNKHCRGSTPRC
110 120 130 140
>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1 (145 aa)
initn: 312 init1: 185 opt: 325 Z-score: 383.9 bits: 77.0 E(32554): 4.6e-15
Smith-Waterman score: 325; 40.2% identity (64.4% similar) in 132 aa overlap (1-130:1-121)
10 20 30 40 50
pF1KB6 MKLLVLAVLLTVAAADSGISP--RAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGT
:.: .: :...: :. : .. .. ::.: : :. :.: : :::.::::: :
CCDS20 MELALLCGLVVMA----GVIPIQGGILNLNKMVKQVT-GKMPILSYWPYGCHCGLGGRGQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 PVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFIC
: : : :::::: :::. : ..:.. : : :. : . : ::.:.. :: .:
CCDS20 PKDATDWCCQTHDCCYDHLKT-QGCSI-----YKDYYRYNFSQGNIHCSDKGSWCEQQLC
60 70 80 90 100
120 130 140
pF1KB6 NCDRNAAICFSKAPYNKAHKNLDTKKYCQS
::...:.:...
CCDS20 ACDKEVAFCLKRNLDTYQKRLRFYWRPHCRGQTPGC
110 120 130 140
>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16 (165 aa)
initn: 312 init1: 171 opt: 314 Z-score: 370.6 bits: 74.7 E(32554): 2.5e-14
Smith-Waterman score: 314; 35.4% identity (68.1% similar) in 113 aa overlap (22-134:42-146)
10 20 30 40 50
pF1KB6 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYC
:.. .. . :: : . : . : .:::.:
CCDS10 LLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRT-P-IAYMKYGCFC
20 30 40 50 60
60 70 80 90 100 110
pF1KB6 GLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNK
:::: : : : .: ::. :: :: .:.. .: .: :. ::..: .... :. ..
CCDS10 GLGGHGQPRDAIDWCCHGHDCCYTRAEEA-GC-----SPKTERYSWQCVNQSVLCGPAEN
70 80 90 100 110 120
120 130 140
pF1KB6 ECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
.:. ..:.::.. : :.... ::
CCDS10 KCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD
130 140 150 160
>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1 (142 aa)
initn: 258 init1: 202 opt: 308 Z-score: 364.7 bits: 73.4 E(32554): 5.4e-14
Smith-Waterman score: 308; 39.2% identity (64.2% similar) in 120 aa overlap (26-143:23-133)
10 20 30 40 50 60
pF1KB6 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPV
:: ::. . : :.::.::::::.::: ::
CCDS20 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSA--LQYNDYGCYCGIGGSHWPV
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 DELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNC
:. : ::..:: :: . .:: .:. : . : .: : .: :.... :. . :.:
CCDS20 DQTDWCCHAHDCCYGRLEKL-GCE-----PKLEKYLFSVSERGIFCAGRTT-CQRLTCEC
60 70 80 90 100
130 140
pF1KB6 DRNAAICFSK--APYNKAHKNLDTKKYCQS
:. ::.:: . . ::. . . .:
CCDS20 DKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC
110 120 130 140
>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1 (211 aa)
initn: 290 init1: 178 opt: 304 Z-score: 357.8 bits: 72.7 E(32554): 1.3e-13
Smith-Waterman score: 304; 34.5% identity (64.2% similar) in 148 aa overlap (2-147:46-182)
10 20 30
pF1KB6 MKLLVLAVLL-TVAAADSGISPRAVWQFRKM
:....:.: .: .. : .. ... :
CCDS20 VLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHG----SLLNLKAM
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 IKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNP
.. : : . .: . .::::::::: : : ::.: ::..:: :: : ..:. .:.
CCDS20 VEAVT-GRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCY-QELFDQGCHPYVDH-
80 90 100 110 120
100 110 120 130 140
pF1KB6 YTHTYSYSCSGSAITCSSKNK-ECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
: :: ... :.::. :: ::. : ::.: ..:. . : . .... . :::
CCDS20 YDHTIE---NNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGF-LNVYCQGP
130 140 150 160 170 180
CCDS20 TPNCSIYEPPPEEVTCSHQSPAPPAPP
190 200 210
>>CCDS47919.1 OC90 gene_id:729330|Hs108|chr8 (477 aa)
initn: 397 init1: 165 opt: 269 Z-score: 313.0 bits: 65.6 E(32554): 4.1e-11
Smith-Waterman score: 286; 36.4% identity (63.6% similar) in 121 aa overlap (26-146:78-190)
10 20 30 40 50
pF1KB6 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGG
:: . .::: : : ....::: : .
CCDS47 NVESVAEIFDCLGPHFTWLQAVFTNFPVLIQFVNGMKCVA-GLCPR-DFEDYGCTCRFEM
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB6 SGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEA
: :::: :.:: : ::..: ..: : :..: . .: .. : : ::.. ::
CCDS47 EGLPVDESDSCCFQHRRCYEEAAEMD-C---LQDPAKLSTEVNCVSKKIICESKDN-CEH
110 120 130 140 150 160
120 130 140
pF1KB6 FICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
..:.::. : :.... :.. . :::. .:
CCDS47 LLCTCDKAAIECLARSSLNSSLNLLDTS-FCLAQTPETTIKEDLTTLLPRVVPVEPTDTS
170 180 190 200 210
CCDS47 LTALSGEEAGHDQEGVGAARATSPPGSAEIVATRVTAKIVTLVPAGIKSLGLAVSSVEND
220 230 240 250 260 270
>--
initn: 397 init1: 165 opt: 269 Z-score: 313.0 bits: 65.6 E(32554): 4.1e-11
Smith-Waterman score: 269; 33.3% identity (65.9% similar) in 123 aa overlap (17-139:298-412)
10 20 30 40
pF1KB6 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNN
:: . ... :. .:. : . . : :...
CCDS47 SLGLAVSSVENDPEETTEKACDRFTFLHLGSGDNMQVMPQLGEMLFC-LTSRCPE-EFES
270 280 290 300 310 320
50 60 70 80 90 100
pF1KB6 YGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITC
:::::: : : : :.::.:: .: : .:...: .: .: :.. . : . :
CCDS47 YGCYCGQEGRGEPRDDLDRCCLSHHCCLEQVRRL-GC-LLERLPWSPVV---CVDHTPKC
330 340 350 360 370 380
110 120 130 140
pF1KB6 SSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
.... :: ..: ::..:: :...: .:.. :.
CCDS47 GGQSL-CEKLLCACDQTAAECMTSASFNQSLKSPSRLGCPGQPAACEDSLHPVPAAPTLG
390 400 410 420 430
CCDS47 SSSEEDSEEDPPQEDLGRAKRFLRKSLGPLGIGPLHGR
440 450 460 470
>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1 (138 aa)
initn: 209 init1: 181 opt: 262 Z-score: 312.6 bits: 63.7 E(32554): 4.3e-11
Smith-Waterman score: 262; 34.3% identity (62.2% similar) in 143 aa overlap (1-138:1-130)
10 20 30 40 50
pF1KB6 MK-LLVLAVLL--TVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSG
:: :: :: .: .: :...:. ....::. : :.. . .:. :::::: :: :
CCDS20 MKGLLPLAWFLACSVPAVQGGL-----LDLKSMIEKVT-GKNALTNYGFYGCYCGWGGRG
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 TPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFI
:: : : :: .::.:: . .. .: : :..:.: . ...:: . :.. .
CCDS20 TPKDGTDWCCWAHDHCYGRLEE-KGC-----NIRTQSYKYRFAWGVVTCEP-GPFCHVNL
60 70 80 90 100
120 130 140
pF1KB6 CNCDRNAAICFSKA--PYNKAHKNLDTKKYCQS
: :::. . :... :: ..
CCDS20 CACDRKLVYCLKRNLRSYNPQYQYFPNILCS
110 120 130
148 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:54:03 2016 done: Fri Nov 4 23:54:04 2016
Total Scan time: 1.680 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]