Result of FASTA (ccds) for
pF1KB6824
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6824, 187 aa
1>>>pF1KB6824 187 - 187 aa - 187 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5396+/-0.000988; mu= 11.7957+/- 0.060
mean_var=72.7914+/-14.544, 0's: 0 Z-trim(105.4): 93 B-trim: 0 in 0/50
Lambda= 0.150326
statistics sampled from 8307 (8405) to 8307 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.258), width: 16
Scan time: 1.850
The best scores are: opt bits E(32554)
CCDS10296.1 CIB2 gene_id:10518|Hs108|chr15 ( 187) 1243 278.6 1.5e-75
CCDS61722.1 CIB2 gene_id:10518|Hs108|chr15 ( 144) 950 215.0 1.7e-56
CCDS12340.1 CIB3 gene_id:117286|Hs108|chr19 ( 187) 820 186.9 6.3e-48
CCDS61723.1 CIB2 gene_id:10518|Hs108|chr15 ( 138) 804 183.3 5.4e-47
CCDS74305.1 CIB3 gene_id:117286|Hs108|chr19 ( 138) 541 126.3 8.1e-30
CCDS10360.1 CIB1 gene_id:10519|Hs108|chr15 ( 191) 447 106.0 1.4e-23
CCDS33160.1 CIB4 gene_id:130106|Hs108|chr2 ( 185) 415 99.0 1.7e-21
CCDS73781.1 CIB1 gene_id:10519|Hs108|chr15 ( 231) 376 90.6 7.3e-19
CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 ( 170) 263 66.1 1.4e-11
>>CCDS10296.1 CIB2 gene_id:10518|Hs108|chr15 (187 aa)
initn: 1243 init1: 1243 opt: 1243 Z-score: 1469.7 bits: 278.6 E(32554): 1.5e-75
Smith-Waterman score: 1243; 100.0% identity (100.0% similar) in 187 aa overlap (1-187:1-187)
10 20 30 40 50 60
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFL
130 140 150 160 170 180
pF1KB6 STFHIRI
:::::::
CCDS10 STFHIRI
>>CCDS61722.1 CIB2 gene_id:10518|Hs108|chr15 (144 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1127.9 bits: 215.0 E(32554): 1.7e-56
Smith-Waterman score: 950; 100.0% identity (100.0% similar) in 144 aa overlap (44-187:1-144)
20 30 40 50 60 70
pF1KB6 DNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLIIQMPELRENPFKER
::::::::::::::::::::::::::::::
CCDS61 MDYRKSPIVHVPMSLIIQMPELRENPFKER
10 20 30
80 90 100 110 120 130
pF1KB6 IVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTDNFICKEDLELTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTDNFICKEDLELTLA
40 50 60 70 80 90
140 150 160 170 180
pF1KB6 RLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFLSTFHIRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFLSTFHIRI
100 110 120 130 140
>>CCDS12340.1 CIB3 gene_id:117286|Hs108|chr19 (187 aa)
initn: 820 init1: 820 opt: 820 Z-score: 973.9 bits: 186.9 E(32554): 6.3e-48
Smith-Waterman score: 820; 61.5% identity (87.2% similar) in 187 aa overlap (1-187:1-187)
10 20 30 40 50 60
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII
::::::.::.:::. :::::::..:.:..: :. .:::.:::.:: : :.::. ::
CCDS12 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTD
.::::..:::..::. .:::::.:..:...:.:::::. : :::.::: :::::::::.:
CCDS12 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 NFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFL
..:: ::: :...::.. :. ::: :::.::..::: : ::.:.. ::..:: .:::::
CCDS12 DYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFL
130 140 150 160 170 180
pF1KB6 STFHIRI
:::::::
CCDS12 STFHIRI
>>CCDS61723.1 CIB2 gene_id:10518|Hs108|chr15 (138 aa)
initn: 804 init1: 804 opt: 804 Z-score: 957.1 bits: 183.3 E(32554): 5.4e-47
Smith-Waterman score: 804; 96.1% identity (98.4% similar) in 127 aa overlap (61-187:12-138)
40 50 60 70 80 90
pF1KB6 HSRFYELAPNLVPMDYRKSPIVHVPMSLIIQMPELRENPFKERIVAAFSEDGEGNLTFND
:. . .::::::::::::::::::::::::
CCDS61 MGNKQTIFTEEQLDNYQENPFKERIVAAFSEDGEGNLTFND
10 20 30 40
100 110 120 130 140 150
pF1KB6 FVDMFSVLCESAPRELKANYAFKIYDFNTDNFICKEDLELTLARLTKSELDEEEVVLVCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 FVDMFSVLCESAPRELKANYAFKIYDFNTDNFICKEDLELTLARLTKSELDEEEVVLVCD
50 60 70 80 90 100
160 170 180
pF1KB6 KVIEEADLDGDGKLGFADFEDMIAKAPDFLSTFHIRI
:::::::::::::::::::::::::::::::::::::
CCDS61 KVIEEADLDGDGKLGFADFEDMIAKAPDFLSTFHIRI
110 120 130
>>CCDS74305.1 CIB3 gene_id:117286|Hs108|chr19 (138 aa)
initn: 541 init1: 541 opt: 541 Z-score: 648.8 bits: 126.3 E(32554): 8.1e-30
Smith-Waterman score: 541; 59.8% identity (86.6% similar) in 127 aa overlap (61-187:12-138)
40 50 60 70 80 90
pF1KB6 HSRFYELAPNLVPMDYRKSPIVHVPMSLIIQMPELRENPFKERIVAAFSEDGEGNLTFND
:. ..:::..::. .:::::.:..:...
CCDS74 MGNKQTVFTHEQLEAYQDNPFRQRIAQVFSEDGDGHMTLDN
10 20 30 40
100 110 120 130 140 150
pF1KB6 FVDMFSVLCESAPRELKANYAFKIYDFNTDNFICKEDLELTLARLTKSELDEEEVVLVCD
:.:::::. : :::.::: :::::::::.:..:: ::: :...::.. :. ::: :::.
CCDS74 FLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCE
50 60 70 80 90 100
160 170 180
pF1KB6 KVIEEADLDGDGKLGFADFEDMIAKAPDFLSTFHIRI
::..::: : ::.:.. ::..:: .::::::::::::
CCDS74 KVLDEADGDHDGRLSLEDFQNMILRAPDFLSTFHIRI
110 120 130
>>CCDS10360.1 CIB1 gene_id:10519|Hs108|chr15 (191 aa)
initn: 284 init1: 185 opt: 447 Z-score: 536.6 bits: 106.0 E(32554): 1.4e-23
Smith-Waterman score: 447; 37.9% identity (73.7% similar) in 190 aa overlap (1-185:1-189)
10 20 30 40 50 60
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII
::.. . ...: : .::: ::..:..:: : :: :: :. . ..: ..::. :.
CCDS10 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQE-QRSVESSLRAQVPFEQIL
10 20 30 40 50
70 80 90 100 110
pF1KB6 QMPELRENPFKERIVAAFSED-GEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNT
..:::. ::::::: .:: . .. .:.:.::.:..::. ..: ..:..:::.:.::.
CCDS10 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 DNFICKEDLELTLARLT----KSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAK
:. . .::: . :: ..:. :. . :...::.:.: :: .....:. .:..
CCDS10 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR
120 130 140 150 160 170
180
pF1KB6 APDFLSTFHIRI
.::: :.:.:
CCDS10 SPDFASSFKIVL
180 190
>>CCDS33160.1 CIB4 gene_id:130106|Hs108|chr2 (185 aa)
initn: 357 init1: 129 opt: 415 Z-score: 499.3 bits: 99.0 E(32554): 1.7e-21
Smith-Waterman score: 415; 39.8% identity (72.2% similar) in 176 aa overlap (11-185:12-180)
10 20 30 40 50
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLI
:.:..:: ::.....:: .:. : .: : : : : . :. .
CCDS33 MGQCLRYQMHWEDLEEYQALTFLTRNEILCIHDTFLKLCP---PGKYYKEAT--LTMDQV
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 IQMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNT
..: :: :::..:: .::. .: ..:.: . : ::. :.: :: .:::.:::::
CCDS33 SSLPALRVNPFRDRICRVFSH--KGMFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 DNFICKEDLELTLARLTKSE-LDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPD
..:: .:::. . :: .:. ..:. .. . ..:. :.:::.:. :.:..:: .::.::
CCDS33 NGFIDEEDLQRIILRLLNSDDMSEDLLMDLTNHVLSESDLDNDNMLSFSEFEHAMAKSPD
120 130 140 150 160 170
180
pF1KB6 FLSTFHIRI
:...:.:
CCDS33 FMNSFRIHFWGC
180
>>CCDS73781.1 CIB1 gene_id:10519|Hs108|chr15 (231 aa)
initn: 421 init1: 151 opt: 376 Z-score: 452.1 bits: 90.6 E(32554): 7.3e-19
Smith-Waterman score: 376; 37.0% identity (72.8% similar) in 162 aa overlap (29-185:69-229)
10 20 30 40 50
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSL
. : :: :: :. . ..: ..::.
CCDS73 LVDNEQQARSGNEHTGRPIAENTDSSPLSTRAHRRFCELLPQE-QRSVESSLRAQVPFEQ
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB6 IIQMPELRENPFKERIVAAFSED-GEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDF
:...:::. ::::::: .:: . .. .:.:.::.:..::. ..: ..:..:::.:.::
CCDS73 ILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDF
100 110 120 130 140 150
120 130 140 150 160 170
pF1KB6 NTDNFICKEDLELTLARLT----KSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMI
. :. . .::: . :: ..:. :. . :...::.:.: :: .....:. .:
CCDS73 DDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI
160 170 180 190 200 210
180
pF1KB6 AKAPDFLSTFHIRI
...::: :.:.:
CCDS73 SRSPDFASSFKIVL
220 230
>>CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 (170 aa)
initn: 329 init1: 258 opt: 263 Z-score: 321.6 bits: 66.1 E(32554): 1.4e-11
Smith-Waterman score: 289; 32.5% identity (64.9% similar) in 151 aa overlap (19-169:12-153)
10 20 30 40 50 60
pF1KB6 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII
:. :. .: .: .:: .: .: : :. :::
CCDS46 MGNEASYPLEMCSHFDADEIKRLGKRFKKL-----DLDNSGSLSVEEFMSL--
10 20 30 40
70 80 90 100 110 120
pF1KB6 QMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTD
:::..::. .:.. :. ::.:.. :..:.. : . .. .: : .::.:::.. :
CCDS46 --PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 NFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFL
..: . .: .: .. ..: . .. . ::.: .:: ::::...: .:
CCDS46 GYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK
110 120 130 140 150 160
pF1KB6 STFHIRI
CCDS46 KMVVDV
170
187 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:23:38 2016 done: Fri Nov 4 14:23:39 2016
Total Scan time: 1.850 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]