Result of FASTA (omim) for
pF1KB6839
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6839, 172 aa
1>>>pF1KB6839 172 - 172 aa - 172 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7559+/-0.00031; mu= 15.3319+/- 0.019
mean_var=58.2214+/-11.442, 0's: 0 Z-trim(115.5): 25 B-trim: 0 in 0/54
Lambda= 0.168087
statistics sampled from 26000 (26025) to 26000 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.305), width: 16
Scan time: 4.980
The best scores are: opt bits E(85289)
NP_006694 (OMIM: 609228) diphosphoinositol polypho ( 172) 1137 283.5 1.2e-76
NP_061967 (OMIM: 609229) diphosphoinositol polypho ( 180) 845 212.7 2.5e-55
NP_950241 (OMIM: 609229) diphosphoinositol polypho ( 181) 833 209.8 1.9e-54
NP_060629 (OMIM: 300528) diphosphoinositol polypho ( 164) 818 206.1 2.2e-53
NP_694853 (OMIM: 300527) diphosphoinositol polypho ( 164) 808 203.7 1.2e-52
NP_001291892 (OMIM: 300527) diphosphoinositol poly ( 164) 808 203.7 1.2e-52
XP_011536097 (OMIM: 609229) PREDICTED: diphosphoin ( 128) 539 138.4 4.2e-33
NP_001287953 (OMIM: 609229) diphosphoinositol poly ( 128) 539 138.4 4.2e-33
NP_001287952 (OMIM: 609229) diphosphoinositol poly ( 128) 539 138.4 4.2e-33
XP_011536098 (OMIM: 609229) PREDICTED: diphosphoin ( 128) 539 138.4 4.2e-33
XP_011536096 (OMIM: 609229) PREDICTED: diphosphoin ( 129) 527 135.5 3.2e-32
NP_001287951 (OMIM: 609229) diphosphoinositol poly ( 129) 527 135.5 3.2e-32
NP_009014 (OMIM: 606261) nucleoside diphosphate-li ( 316) 143 42.6 0.0007
NP_671701 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 134 40.2 0.0017
NP_671702 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 134 40.2 0.0017
NP_001152 (OMIM: 602852) NUDT2 gene product [Homo ( 147) 134 40.2 0.0017
NP_001231319 (OMIM: 602852) NUDT2 gene product [Ho ( 147) 134 40.2 0.0017
NP_932158 (OMIM: 606261) nucleoside diphosphate-li ( 147) 129 39.0 0.004
>>NP_006694 (OMIM: 609228) diphosphoinositol polyphospha (172 aa)
initn: 1137 init1: 1137 opt: 1137 Z-score: 1497.2 bits: 283.5 E(85289): 1.2e-76
Smith-Waterman score: 1137; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
130 140 150 160 170
>>NP_061967 (OMIM: 609229) diphosphoinositol polyphospha (180 aa)
initn: 845 init1: 845 opt: 845 Z-score: 1114.2 bits: 212.7 E(85289): 2.5e-55
Smith-Waterman score: 845; 79.1% identity (90.5% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
:::.: ::::::: .:.::::::::::::.:.:::::::::.::.::::::::::::::.
NP_061 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF
:::::: ::::::: ::::.::::::.:::::::::: :::.:::::::::::::::::
NP_061 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
:.:::::::: ::::.: :.: :. : : ::. .: .
NP_061 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
130 140 150 160 170 180
>>NP_950241 (OMIM: 609229) diphosphoinositol polyphospha (181 aa)
initn: 836 init1: 482 opt: 833 Z-score: 1098.5 bits: 209.8 E(85289): 1.9e-54
Smith-Waterman score: 833; 78.6% identity (89.9% similar) in 159 aa overlap (1-158:1-159)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
:::.: ::::::: .:.::::::::::::.:.:::::::::.::.::::::::::::::.
NP_950 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW
:::::: ::::::: ::::.:::: ::.:::::::::: :::.::::::::::::::::
NP_950 GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
::.:::::::: ::::.: :.: :. : : ::. .: .
NP_950 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV
130 140 150 160 170 180
NP_950 R
>>NP_060629 (OMIM: 300528) diphosphoinositol polyphospha (164 aa)
initn: 821 init1: 477 opt: 818 Z-score: 1079.4 bits: 206.1 E(85289): 2.2e-53
Smith-Waterman score: 818; 76.7% identity (89.3% similar) in 159 aa overlap (2-159:1-159)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
:: : ::::::: .:.:::::::::::: :.:::::::::.:::::::::::::::::.
NP_060 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
10 20 30 40 50
70 80 90 100 110
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW
:::::: ::::::: ::::.:.:: ::.:::::::::: :::.::::::::.:::::::
NP_060 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
::.:::::::: ::::.: :.: :. : : .::. .. ..
NP_060 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
120 130 140 150 160
>>NP_694853 (OMIM: 300527) diphosphoinositol polyphospha (164 aa)
initn: 810 init1: 476 opt: 808 Z-score: 1066.3 bits: 203.7 E(85289): 1.2e-52
Smith-Waterman score: 808; 76.1% identity (88.7% similar) in 159 aa overlap (2-159:1-159)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
:: : ::::::: .:.:::::::::::: :.:::::::::.:::::::::::::::::.
NP_694 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
10 20 30 40 50
70 80 90 100 110
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW
:::::: ::::::: ::::.:.:: ::. ::::::::: :::.::::::::.:::::::
NP_694 GAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREW
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
::.:::::::: ::::.: :.: :. : : .::. .. ..
NP_694 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
120 130 140 150 160
>>NP_001291892 (OMIM: 300527) diphosphoinositol polyphos (164 aa)
initn: 810 init1: 476 opt: 808 Z-score: 1066.3 bits: 203.7 E(85289): 1.2e-52
Smith-Waterman score: 808; 76.1% identity (88.7% similar) in 159 aa overlap (2-159:1-159)
10 20 30 40 50 60
pF1KB6 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
:: : ::::::: .:.:::::::::::: :.:::::::::.:::::::::::::::::.
NP_001 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
10 20 30 40 50
70 80 90 100 110
pF1KB6 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW
:::::: ::::::: ::::.:.:: ::. ::::::::: :::.::::::::.:::::::
NP_001 GAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREW
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
::.:::::::: ::::.: :.: :. : : .::. .. ..
NP_001 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
120 130 140 150 160
>>XP_011536097 (OMIM: 609229) PREDICTED: diphosphoinosit (128 aa)
initn: 551 init1: 539 opt: 539 Z-score: 715.3 bits: 138.4 E(85289): 4.2e-33
Smith-Waterman score: 539; 77.4% identity (87.7% similar) in 106 aa overlap (53-158:1-106)
30 40 50 60 70 80
pF1KB6 CLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVG
:::::::. :::::: ::::::: ::::.:
XP_011 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KB6 IFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFET
:::::.:::::::::: :::.::::::::::::::::::.:::::::: ::::.: :.:
XP_011 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK
40 50 60 70 80 90
150 160 170
pF1KB6 LRQGYSANNGTPVVATTYSVSAQSSMSGIR
:. : : ::. .: .
XP_011 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
100 110 120
>>NP_001287953 (OMIM: 609229) diphosphoinositol polyphos (128 aa)
initn: 551 init1: 539 opt: 539 Z-score: 715.3 bits: 138.4 E(85289): 4.2e-33
Smith-Waterman score: 539; 77.4% identity (87.7% similar) in 106 aa overlap (53-158:1-106)
30 40 50 60 70 80
pF1KB6 CLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVG
:::::::. :::::: ::::::: ::::.:
NP_001 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KB6 IFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFET
:::::.:::::::::: :::.::::::::::::::::::.:::::::: ::::.: :.:
NP_001 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK
40 50 60 70 80 90
150 160 170
pF1KB6 LRQGYSANNGTPVVATTYSVSAQSSMSGIR
:. : : ::. .: .
NP_001 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
100 110 120
>>NP_001287952 (OMIM: 609229) diphosphoinositol polyphos (128 aa)
initn: 551 init1: 539 opt: 539 Z-score: 715.3 bits: 138.4 E(85289): 4.2e-33
Smith-Waterman score: 539; 77.4% identity (87.7% similar) in 106 aa overlap (53-158:1-106)
30 40 50 60 70 80
pF1KB6 CLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVG
:::::::. :::::: ::::::: ::::.:
NP_001 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KB6 IFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFET
:::::.:::::::::: :::.::::::::::::::::::.:::::::: ::::.: :.:
NP_001 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK
40 50 60 70 80 90
150 160 170
pF1KB6 LRQGYSANNGTPVVATTYSVSAQSSMSGIR
:. : : ::. .: .
NP_001 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
100 110 120
>>XP_011536098 (OMIM: 609229) PREDICTED: diphosphoinosit (128 aa)
initn: 551 init1: 539 opt: 539 Z-score: 715.3 bits: 138.4 E(85289): 4.2e-33
Smith-Waterman score: 539; 77.4% identity (87.7% similar) in 106 aa overlap (53-158:1-106)
30 40 50 60 70 80
pF1KB6 CLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVG
:::::::. :::::: ::::::: ::::.:
XP_011 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KB6 IFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFET
:::::.:::::::::: :::.::::::::::::::::::.:::::::: ::::.: :.:
XP_011 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK
40 50 60 70 80 90
150 160 170
pF1KB6 LRQGYSANNGTPVVATTYSVSAQSSMSGIR
:. : : ::. .: .
XP_011 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
100 110 120
172 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 00:10:34 2016 done: Sat Nov 5 00:10:35 2016
Total Scan time: 4.980 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]