Result of FASTA (omim) for
pF1KB6871
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6871, 180 aa
1>>>pF1KB6871 180 - 180 aa - 180 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9607+/-0.000433; mu= 15.5889+/- 0.027
mean_var=82.8678+/-17.732, 0's: 0 Z-trim(112.9): 249 B-trim: 2110 in 3/50
Lambda= 0.140890
statistics sampled from 21611 (21998) to 21611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.258), width: 16
Scan time: 5.510
The best scores are: opt bits E(85289)
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 1189 251.0 7.4e-67
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 1096 232.1 3.6e-61
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 972 206.9 1.4e-53
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 972 206.9 1.4e-53
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 972 206.9 1.4e-53
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 972 206.9 1.4e-53
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 957 203.9 1.2e-52
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 957 203.9 1.2e-52
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 809 173.8 1.3e-43
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 719 155.6 4.8e-38
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 711 153.9 1.3e-37
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 705 152.5 2.5e-37
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 671 146.1 6.4e-35
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 671 146.3 8.3e-35
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 590 129.8 7.4e-30
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 590 129.8 7.4e-30
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 560 123.2 2.3e-28
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 559 123.0 2.6e-28
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 562 124.1 3.7e-28
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 547 120.6 1.4e-27
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 538 118.7 5.3e-27
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 531 117.3 1.4e-26
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 531 117.3 1.4e-26
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 519 114.9 7.7e-26
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 519 114.9 7.9e-26
NP_001287997 (OMIM: 603425) ADP-ribosylation facto ( 135) 502 111.3 6.6e-25
NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 499 110.8 1.3e-24
NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 499 110.8 1.3e-24
NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 499 110.8 1.3e-24
NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 499 110.8 1.3e-24
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 465 103.9 1.6e-22
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 465 103.9 1.6e-22
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142) 449 100.5 1.2e-21
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 450 100.9 1.3e-21
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 450 100.9 1.3e-21
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142) 448 100.3 1.4e-21
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142) 448 100.3 1.4e-21
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 428 96.4 2.8e-20
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 428 96.4 2.8e-20
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 428 96.4 2.8e-20
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 428 96.4 2.8e-20
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 426 96.0 3.8e-20
NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 387 88.0 9e-18
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 375 85.6 4.9e-17
NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 367 83.9 1.3e-16
NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159) 361 82.7 3.1e-16
XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159) 361 82.7 3.1e-16
NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 350 80.6 1.7e-15
NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201) 350 80.6 1.7e-15
XP_011526784 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 350 80.6 1.7e-15
>>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho (180 aa)
initn: 1189 init1: 1189 opt: 1189 Z-score: 1321.3 bits: 251.0 E(85289): 7.4e-67
Smith-Waterman score: 1189; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
130 140 150 160 170 180
>>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho (180 aa)
initn: 1096 init1: 1096 opt: 1096 Z-score: 1219.1 bits: 232.1 E(85289): 3.6e-61
Smith-Waterman score: 1096; 90.0% identity (97.2% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::.:.::::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
::::::::::::.:::::.::::::::::::::::::::.:: :::::::: :::::::
NP_001 ICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
::.::::::.:::: .::.::::::: ::.:::::::::::::::::.::::::.:::::
NP_001 LLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR
130 140 150 160 170 180
>>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1082.9 bits: 206.9 E(85289): 1.4e-53
Smith-Waterman score: 972; 81.9% identity (93.2% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.::::::..:
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
NP_001 K
>>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1082.9 bits: 206.9 E(85289): 1.4e-53
Smith-Waterman score: 972; 81.9% identity (93.2% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.::::::..:
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
NP_001 K
>>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1082.9 bits: 206.9 E(85289): 1.4e-53
Smith-Waterman score: 972; 81.9% identity (93.2% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.::::::..:
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
NP_001 K
>>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1082.9 bits: 206.9 E(85289): 1.4e-53
Smith-Waterman score: 972; 81.9% identity (93.2% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.::::::..:
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
NP_001 K
>>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa)
initn: 957 init1: 957 opt: 957 Z-score: 1066.4 bits: 203.9 E(85289): 1.2e-52
Smith-Waterman score: 957; 78.9% identity (93.3% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . :.. ..:::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.:::::...:...
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
NP_001 K
>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa)
initn: 957 init1: 957 opt: 957 Z-score: 1066.4 bits: 203.9 E(85289): 1.2e-52
Smith-Waterman score: 957; 78.9% identity (93.3% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . :.. ..:::.:::::::::::::::::::::::::::::::::::::::::::
XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
XP_005 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.:::::...:...
XP_005 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
XP_005 K
>>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho (175 aa)
initn: 840 init1: 799 opt: 809 Z-score: 904.0 bits: 173.8 E(85289): 1.3e-43
Smith-Waterman score: 809; 67.1% identity (90.4% similar) in 167 aa overlap (8-174:4-170)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
..:.:::.:.:::::.:::::::::::::::::. ::::::.::::::: :::
NP_001 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
. :.:::::::::::::::::. .::::::::: ::.:..:. .::...... :.:::.
NP_001 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
.:.::::::.:.:: :. .:::: ..:.:.:::: .:::.: :::.:: ::.
NP_001 ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS
120 130 140 150 160 170
>>XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosylatio (212 aa)
initn: 719 init1: 719 opt: 719 Z-score: 804.1 bits: 155.6 E(85289): 4.8e-38
Smith-Waterman score: 719; 86.7% identity (93.8% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KB6 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
XP_016 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
::::::::
XP_016 LLVFANKQVGARASLGNVRSQCGFRLVVGVTGGWWGPFLCPVDSPSHQPFLPPGPPQRHE
130 140 150 160 170 180
180 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:11:27 2016 done: Fri Nov 4 14:11:28 2016
Total Scan time: 5.510 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]