Result of FASTA (ccds) for
pF1KB6883
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6883, 181 aa
1>>>pF1KB6883 181 - 181 aa - 181 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8338+/-0.000672; mu= 11.0052+/- 0.041
mean_var=84.4716+/-16.279, 0's: 0 Z-trim(111.6): 48 B-trim: 0 in 0/53
Lambda= 0.139546
statistics sampled from 12469 (12520) to 12469 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.385), width: 16
Scan time: 2.130
The best scores are: opt bits E(32554)
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 1176 245.6 1.2e-65
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 1062 222.7 9.2e-59
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 487 107.3 2.3e-23
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 487 107.5 3.6e-23
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 487 107.5 3.7e-23
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 446 99.0 5.3e-21
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 364 82.2 2.2e-16
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 362 81.8 2.7e-16
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 362 81.8 2.9e-16
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 362 81.8 3.2e-16
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 362 81.9 3.9e-16
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 356 80.7 9.3e-16
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 356 80.8 1.4e-15
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 356 80.9 1.6e-15
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 356 81.0 2.2e-15
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 356 81.1 2.8e-15
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 344 78.2 3.6e-15
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 342 77.7 4.2e-15
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 342 77.8 4.5e-15
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 336 76.5 8.5e-15
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 336 76.5 9.7e-15
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 341 77.9 1.4e-14
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 341 77.9 1.4e-14
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 328 75.0 3.8e-14
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 328 75.0 4.2e-14
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 328 75.1 5.5e-14
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 318 72.9 1.2e-13
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 314 72.1 2.4e-13
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 311 71.6 3.7e-13
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 300 69.5 3e-12
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 295 68.3 3.3e-12
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 300 69.5 3.3e-12
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 291 67.4 4.7e-12
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 295 68.5 6.7e-12
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 295 68.5 6.7e-12
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 294 68.3 7.1e-12
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 294 68.3 7.3e-12
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 294 68.3 7.4e-12
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 292 67.9 9.8e-12
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 283 66.1 3.3e-11
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 283 66.1 3.5e-11
>>CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 (181 aa)
initn: 1176 init1: 1176 opt: 1176 Z-score: 1292.0 bits: 245.6 E(32554): 1.2e-65
Smith-Waterman score: 1176; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
130 140 150 160 170 180
pF1KB6 T
:
CCDS31 T
>>CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 (167 aa)
initn: 1062 init1: 1062 opt: 1062 Z-score: 1168.5 bits: 222.7 E(32554): 9.2e-59
Smith-Waterman score: 1062; 100.0% identity (100.0% similar) in 164 aa overlap (18-181:4-167)
10 20 30 40 50 60
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
:::::::::::::::::::::::::::::::::::::::::::
CCDS41 MEHIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
10 20 30 40
70 80 90 100 110 120
pF1KB6 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
110 120 130 140 150 160
pF1KB6 T
:
CCDS41 T
>>CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 (799 aa)
initn: 479 init1: 291 opt: 487 Z-score: 532.9 bits: 107.3 E(32554): 2.3e-23
Smith-Waterman score: 487; 51.1% identity (79.1% similar) in 139 aa overlap (33-169:59-197)
10 20 30 40 50 60
pF1KB6 NRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKE
. .:.::.:.: ::.:: ::. : .::.::
CCDS33 GADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKE
30 40 50 60 70 80
70 80 90 100 110 120
pF1KB6 FSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
:::::.::: ::: :... .:: ... .:.::. :: :::.. ::...:..: . .:.
CCDS33 FSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLR
90 100 110 120 130 140
130 140 150 160 170 180
pF1KB6 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
::: ::.. : :::::::.:::.::::: :. . .: : . :::.:
CCDS33 APHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS
150 160 170 180 190 200
pF1KB6 T
CCDS33 LGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHG
210 220 230 240 250 260
>>CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376 aa)
initn: 479 init1: 291 opt: 487 Z-score: 529.5 bits: 107.5 E(32554): 3.6e-23
Smith-Waterman score: 487; 51.1% identity (79.1% similar) in 139 aa overlap (33-169:707-845)
10 20 30 40 50 60
pF1KB6 NRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKE
. .:.::.:.: ::.:: ::. : .::.::
CCDS33 GADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKE
680 690 700 710 720 730
70 80 90 100 110 120
pF1KB6 FSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
:::::.::: ::: :... .:: ... .:.::. :: :::.. ::...:..: . .:.
CCDS33 FSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLR
740 750 760 770 780 790
130 140 150 160 170 180
pF1KB6 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
::: ::.. : :::::::.:::.::::: :. . .: : . :::.:
CCDS33 APHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS
800 810 820 830 840 850
pF1KB6 T
CCDS33 LGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHG
860 870 880 890 900 910
>>CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447 aa)
initn: 479 init1: 291 opt: 487 Z-score: 529.2 bits: 107.5 E(32554): 3.7e-23
Smith-Waterman score: 487; 51.1% identity (79.1% similar) in 139 aa overlap (33-169:707-845)
10 20 30 40 50 60
pF1KB6 NRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKE
. .:.::.:.: ::.:: ::. : .::.::
CCDS33 GADLKDCVSNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKE
680 690 700 710 720 730
70 80 90 100 110 120
pF1KB6 FSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNEKILE
:::::.::: ::: :... .:: ... .:.::. :: :::.. ::...:..: . .:.
CCDS33 FSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQAQLADDVLR
740 750 760 770 780 790
130 140 150 160 170 180
pF1KB6 EPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIYN
::: ::.. : :::::::.:::.::::: :. . .: : . :::.:
CCDS33 APHPDMFKEQQLQIFNLMKFDSYTRFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS
800 810 820 830 840 850
pF1KB6 T
CCDS33 LGSDHSSVSTPKKLSGKSKSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHG
860 870 880 890 900 910
>>CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 (566 aa)
initn: 411 init1: 227 opt: 446 Z-score: 490.5 bits: 99.0 E(32554): 5.3e-21
Smith-Waterman score: 446; 49.0% identity (71.5% similar) in 151 aa overlap (18-165:43-193)
10 20 30 40
pF1KB6 MFNRAVSRLSRKRPPSDIHD-SDGSSSSSHQSLKSTAKWAASLENLL
::. .: :: . .:.:: :.: ::
CCDS43 GRMVLAVSDGELSSTTGPQGQGEGRGSSLSIHSLPSGPSSPFPTEEQPVASWALSFERLL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB6 EDPEGVKRFREFLKKEFSEENVLFWLACEDFKKM--QDKTQMQEKAKEIYMTFLSSKASS
.:: :. : :::::::: ::: :: ::: :... .: :. ..:..::. ::::.: :
CCDS43 QDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALS
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB6 QVNVEGQSRLNEKILEEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEED
::.. :. :.:..: ::.: ::. : :::::::.:::.::.:: :. . .: : .
CCDS43 PVNIDRQAWLGEEVLAEPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYRECLLAEAEGRP
140 150 160 170 180 190
170 180
pF1KB6 LPDAQTAAKRASRIYNT
:
CCDS43 LREPGSSRLGSPDATRKKPKLKPGKSLPLGVEELGQLPPVEGPGGRPLRKSFRRELGGTA
200 210 220 230 240 250
>>CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 (209 aa)
initn: 309 init1: 246 opt: 364 Z-score: 407.6 bits: 82.2 E(32554): 2.2e-16
Smith-Waterman score: 364; 43.9% identity (71.2% similar) in 139 aa overlap (19-153:60-197)
10 20 30 40
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTA---KWAASLENL
: .: .::. ... :.: .:. :::.:
CCDS13 THSLLDDKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKL
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB6 LEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQ
: . : . : :::.::::::. :::::::.:: .. . ::.::: .:. : :..:
CCDS13 LANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQ
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB6 VNVEGQSRLNE-KILEEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEED
.:.. ..: . : .. : : :.. : :..::. ::: ::::::..:
CCDS13 INIDFRTRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSL
150 160 170 180 190 200
170 180
pF1KB6 LPDAQTAAKRASRIYNT
CCDS13 K
>>CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 (187 aa)
initn: 362 init1: 263 opt: 362 Z-score: 406.1 bits: 81.8 E(32554): 2.7e-16
Smith-Waterman score: 362; 43.5% identity (74.2% similar) in 124 aa overlap (31-153:34-157)
10 20 30 40 50 60
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
: . . ::: :::::. :. :. :::
CCDS44 RLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAFLK
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNE-KIL
.:.::::. ::..::..::... .... :::.:: :.: .:...::... .: . . .
CCDS44 SEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 EEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIY
:: :.. : .:::::. ::: ::::: ..:
CCDS44 LEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCASLV
130 140 150 160 170 180
180
pF1KB6 NT
CCDS44 PQCA
>>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa)
initn: 362 init1: 263 opt: 362 Z-score: 405.6 bits: 81.8 E(32554): 2.9e-16
Smith-Waterman score: 362; 43.5% identity (74.2% similar) in 124 aa overlap (31-153:52-175)
10 20 30 40 50 60
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLK
: . . ::: :::::. :. :. :::
CCDS12 RLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAFLK
30 40 50 60 70 80
70 80 90 100 110
pF1KB6 KEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVEGQSRLNE-KIL
.:.::::. ::..::..::... .... :::.:: :.: .:...::... .: . . .
CCDS12 SEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNM
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB6 EEPHPLMFQKLQDQIFNLMKYDSYSRFLKSDLFLKHKRTEEEEEDLPDAQTAAKRASRIY
:: :.. : .:::::. ::: ::::: ..:
CCDS12 LEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCASLV
150 160 170 180 190 200
180
pF1KB6 NT
CCDS12 PQCA
>>CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 (235 aa)
initn: 385 init1: 248 opt: 362 Z-score: 404.7 bits: 81.8 E(32554): 3.2e-16
Smith-Waterman score: 362; 35.6% identity (64.4% similar) in 180 aa overlap (7-179:46-219)
10 20 30
pF1KB6 MFNRAVSRLSRKRPPSDIHDSDGSSSSSHQSLKS--
.::: ..:.. :: :.: . ..
CCDS13 SKEKTFFKLIHGSGKEETSKEAKIRAKEKRNRLSLLVQKPEFHEDTRSSRSGHLAKETRV
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 ----TAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKA
..::. :...:: .:.. : .::: ::::::. ::.::::::: . :.. ::
CCDS13 SPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKA
80 90 100 110 120 130
100 110 120 130 140
pF1KB6 KEIYMTFLSSKASSQVNVEGQSR-LNEKILEEPHPLMFQKLQDQIFNLMKYDSYSRFLKS
: :: :... : ..::.. ... . . . .: :. :.....::. :::.:::::
CCDS13 KAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKS
140 150 160 170 180 190
150 160 170 180
pF1KB6 DLFLKHKRTEEEEEDLPDAQTAAKRASRIYNT
:..: . : :. : .: :: .
CCDS13 DIYL------DLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
200 210 220 230
181 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:28:26 2016 done: Sat Nov 5 20:28:26 2016
Total Scan time: 2.130 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]