FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6896, 202 aa
1>>>pF1KB6896 202 - 202 aa - 202 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7500+/-0.000838; mu= 10.3764+/- 0.050
mean_var=62.7233+/-12.619, 0's: 0 Z-trim(105.4): 49 B-trim: 0 in 0/49
Lambda= 0.161942
statistics sampled from 8363 (8412) to 8363 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.258), width: 16
Scan time: 1.670
The best scores are: opt bits E(32554)
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 1329 319.0 1.2e-87
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 618 152.9 1.1e-37
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 612 151.5 3.2e-37
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 596 147.8 3.9e-36
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 578 143.6 7.3e-35
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 558 138.9 2.1e-33
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 558 139.0 2.9e-33
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 539 134.5 6.6e-32
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 535 133.6 2e-31
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 535 133.6 2.3e-31
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 535 133.7 3.4e-31
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 535 133.7 4.4e-31
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 523 130.7 6.1e-31
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 489 122.8 1.7e-28
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 484 121.6 3e-28
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 458 115.5 1.7e-26
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 431 109.2 1.8e-24
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 394 100.6 5.5e-22
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 394 100.6 7.4e-22
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 379 97.1 9.3e-21
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 379 97.1 1e-20
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 379 97.2 1.4e-20
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 360 92.7 1.8e-19
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 316 82.5 4.3e-16
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 316 82.5 4.7e-16
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 316 82.5 4.8e-16
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 312 81.5 8.9e-16
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 302 79.1 1.7e-15
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 302 79.1 1.8e-15
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 306 80.2 3.3e-15
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 306 80.2 3.3e-15
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 303 79.4 3.5e-15
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 303 79.4 3.9e-15
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 303 79.4 3.9e-15
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 297 78.1 1.7e-14
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 294 77.3 2e-14
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 297 78.1 2.7e-14
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 297 78.1 2.9e-14
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 281 74.3 1.3e-13
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 281 74.3 1.3e-13
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 281 74.3 1.3e-13
CCDS55652.1 RGS5 gene_id:8490|Hs108|chr1 ( 73) 250 66.9 3.6e-12
>>CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 (202 aa)
initn: 1329 init1: 1329 opt: 1329 Z-score: 1687.0 bits: 319.0 E(32554): 1.2e-87
Smith-Waterman score: 1329; 99.5% identity (100.0% similar) in 202 aa overlap (1-202:1-202)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS13 FICSEAPKEVNIDHETHELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
130 140 150 160 170 180
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
::::::::::::::::::::::
CCDS13 AAQASAASATLSSCSLDEPSHT
190 200
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 790.1 bits: 152.9 E(32554): 1.1e-37
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
CCDS41 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
CCDS41 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
CCDS41 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
CCDS41 LSQSQRRLS
180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 603 init1: 566 opt: 612 Z-score: 781.8 bits: 151.5 E(32554): 3.2e-37
Smith-Waterman score: 612; 58.9% identity (78.6% similar) in 168 aa overlap (17-184:29-193)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKH
: ..:::: . :::. .:. .. . ..
CCDS13 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRA
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 SKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSAT
: : .:.. : .:::.::: : :::::.::::::::::::::::::::::: ::..
CCDS13 LK--RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTA
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 KLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSY
::.:.::.:::::. .::.::::: .::: :: ::: . :::: ::::...:::::::
CCDS13 KLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSY
120 130 140 150 160 170
170 180 190 200
pF1KB6 PRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
::::.: : :: .:.
CCDS13 PRFLRSKMYLDLLSQSQRRLS
180 190
>>CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 (181 aa)
initn: 611 init1: 473 opt: 596 Z-score: 762.3 bits: 147.8 E(32554): 3.9e-36
Smith-Waterman score: 596; 51.1% identity (77.2% similar) in 180 aa overlap (1-180:1-179)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
::. :::.: .:::::::.: .:::.:.: . : : : .: ... ...:
CCDS12 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDL-VIPYNEKPEKPAKTQKTSLDEAL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
::.:.: ::... :.:.:..:::.::::::::::.:::..:::.: .:.: .:.::.::
CCDS12 QWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:: .:::::::::: :...: :: . . :: :: . ..:::::: :::..: :..:
CCDS12 FIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQEL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
CCDS12 IK
180
>>CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 (185 aa)
initn: 587 init1: 318 opt: 578 Z-score: 739.4 bits: 143.6 E(32554): 7.3e-35
Smith-Waterman score: 578; 50.0% identity (75.5% similar) in 184 aa overlap (1-180:1-183)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
::. :::.: .:::::::.: .:::.:.: . : : : .: ... ...:
CCDS58 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDL-VIPYNEKPEKPAKTQKTSLDEAL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
::.:.: ::... :.:.:..:::.::::::::::.:::..:::.: .:.: .:.::.::
CCDS58 QWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEE
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 FICSEAPKEV----NIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPA
:: .:::::: :::: :...: :: . . :: :: . ..:::::: :::..:
CCDS58 FIQTEAPKEVGLWVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEF
120 130 140 150 160 170
180 190 200
pF1KB6 YRDLAAQASAASATLSSCSLDEPSHT
:..:
CCDS58 YQELIK
180
>>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa)
initn: 539 init1: 435 opt: 558 Z-score: 713.4 bits: 138.9 E(32554): 2.1e-33
Smith-Waterman score: 558; 49.2% identity (75.7% similar) in 185 aa overlap (1-185:1-182)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
::. ::..:..::. ::..: :::..:.::. .:. .:. . . .: .: .:.:
CCDS12 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSD-SCEHNSSHNKK--DKVVICQRVSQEEVK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: ::.. :.: . :.:::.::::.:.::::..::..:::.:::.: .::. .:..:..:
CCDS12 KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:: .: ::::.: ::: : :. : :::: :: : .::::::: ::::: : ::
CCDS12 FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
. .:
CCDS12 VNPSSCGAEKQKGAKSSADCASLVPQCA
180 190 200
>>CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 (302 aa)
initn: 539 init1: 435 opt: 558 Z-score: 710.6 bits: 139.0 E(32554): 2.9e-33
Smith-Waterman score: 558; 49.2% identity (75.7% similar) in 185 aa overlap (1-185:98-279)
10 20 30
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKS
::. ::..:..::. ::..: :::..:.::
CCDS44 GEEAKYAQSRSHSSSCRISFLLANSKLLNKMCKGLAGLPASCLRSAKDMKHRLGFLLQKS
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB6 ELGCDTGSTGKFEWGSKHSKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEE
. .:. .:. . . .: .: .:.: : ::.. :.: . :.:::.::::.:.:::
CCDS44 D-SCEHNSSHNKK--DKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEE
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB6 NLEFWLACEEFKKIRSATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATAT
:..::..:::.:::.: .::. .:..:..::: .: ::::.: ::: : :. : :
CCDS44 NIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTIT
190 200 210 220 230 240
160 170 180 190 200
pF1KB6 CFDAAQGKTRTLMEKDSYPRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
::: :: : .::::::: ::::: : ::. .:
CCDS44 CFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCASLVPQCA
250 260 270 280 290 300
>>CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 (311 aa)
initn: 540 init1: 499 opt: 539 Z-score: 686.3 bits: 134.5 E(32554): 6.6e-32
Smith-Waterman score: 539; 52.0% identity (75.4% similar) in 171 aa overlap (13-183:138-304)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKF
...::..:..:::: ...: . . .::
CCDS35 PICGPKVGGPTEMLRGMYLTRNGNLQRRHTMKEAKDMKNKLGIFRRRNE-SPGAPPAGK-
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB6 EWGSKHSKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFK
..: : . ::..: : ::.. :: : :.:.:.:::.:::::::::::::::.::
CCDS35 --ADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFK
170 180 190 200 210 220
110 120 130 140 150 160
pF1KB6 KIRSATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTL
:..: .:.::.:..:: :.: .: ::::.: ::: :. :::..: ::: :: . :
CCDS35 KVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGL
230 240 250 260 270 280
170 180 190 200
pF1KB6 MEKDSYPRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
::::::::::.: : :: :
CCDS35 MEKDSYPRFLRSDLYLDLINQKKMSPPL
290 300 310
>>CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 (519 aa)
initn: 540 init1: 499 opt: 535 Z-score: 677.6 bits: 133.6 E(32554): 2e-31
Smith-Waterman score: 535; 53.0% identity (75.0% similar) in 168 aa overlap (16-183:349-512)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWG
::..:..:::: ...: . . .:: .
CCDS67 LFFTGHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNE-SPGAPPAGK---A
320 330 340 350 360 370
50 60 70 80 90 100
pF1KB6 SKHSKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR
.: : . ::..: : ::.. :: : :.:.:.:::.:::::::::::::::.:::..
CCDS67 DKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK
380 390 400 410 420 430
110 120 130 140 150 160
pF1KB6 SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEK
: .:.::.:..:: :.: .: ::::.: ::: :. :::..: ::: :: . ::::
CCDS67 SQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEK
440 450 460 470 480 490
170 180 190 200
pF1KB6 DSYPRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
:::::::.: : :: :
CCDS67 DSYPRFLRSDLYLDLINQKKMSPPL
500 510
>>CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 (591 aa)
initn: 540 init1: 499 opt: 535 Z-score: 676.6 bits: 133.6 E(32554): 2.3e-31
Smith-Waterman score: 535; 53.0% identity (75.0% similar) in 168 aa overlap (16-183:421-584)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWG
::..:..:::: ...: . . .:: .
CCDS65 AASPPDSKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNE-SPGAPPAGK---A
400 410 420 430 440
50 60 70 80 90 100
pF1KB6 SKHSKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR
.: : . ::..: : ::.. :: : :.:.:.:::.:::::::::::::::.:::..
CCDS65 DKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK
450 460 470 480 490 500
110 120 130 140 150 160
pF1KB6 SATKLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEK
: .:.::.:..:: :.: .: ::::.: ::: :. :::..: ::: :: . ::::
CCDS65 SQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEK
510 520 530 540 550 560
170 180 190 200
pF1KB6 DSYPRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
:::::::.: : :: :
CCDS65 DSYPRFLRSDLYLDLINQKKMSPPL
570 580 590
202 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:32:43 2016 done: Fri Nov 4 13:32:43 2016
Total Scan time: 1.670 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]