Result of FASTA (omim) for
pF1KB6896
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6896, 202 aa
1>>>pF1KB6896 202 - 202 aa - 202 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3660+/-0.000375; mu= 12.5595+/- 0.023
mean_var=60.7550+/-12.406, 0's: 0 Z-trim(112.2): 160 B-trim: 823 in 1/49
Lambda= 0.164544
statistics sampled from 20929 (21092) to 20929 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.247), width: 16
Scan time: 4.670
The best scores are: opt bits E(85289)
NP_002919 (OMIM: 602514) regulator of G-protein si ( 202) 1329 323.9 1.1e-88
XP_005245612 (OMIM: 607189) PREDICTED: regulator o ( 180) 618 155.1 6.3e-38
XP_016858125 (OMIM: 607189) PREDICTED: regulator o ( 180) 618 155.1 6.3e-38
XP_016858126 (OMIM: 607189) PREDICTED: regulator o ( 180) 618 155.1 6.3e-38
XP_011508392 (OMIM: 607189) PREDICTED: regulator o ( 180) 618 155.1 6.3e-38
NP_001095920 (OMIM: 607189) regulator of G-protein ( 180) 618 155.1 6.3e-38
XP_016858124 (OMIM: 607189) PREDICTED: regulator o ( 180) 618 155.1 6.3e-38
XP_011508393 (OMIM: 607189) PREDICTED: regulator o ( 178) 612 153.7 1.7e-37
XP_011508391 (OMIM: 607189) PREDICTED: regulator o ( 198) 612 153.7 1.8e-37
XP_016858122 (OMIM: 607189) PREDICTED: regulator o ( 198) 612 153.7 1.8e-37
XP_016858121 (OMIM: 607189) PREDICTED: regulator o ( 198) 612 153.7 1.8e-37
NP_203131 (OMIM: 607189) regulator of G-protein si ( 198) 612 153.7 1.8e-37
XP_016858123 (OMIM: 607189) PREDICTED: regulator o ( 198) 612 153.7 1.8e-37
XP_016858120 (OMIM: 607189) PREDICTED: regulator o ( 198) 612 153.7 1.8e-37
NP_003608 (OMIM: 145500,603276) regulator of G-pro ( 181) 596 149.9 2.4e-36
NP_001241678 (OMIM: 145500,603276) regulator of G- ( 185) 578 145.6 4.7e-35
NP_005604 (OMIM: 602516) regulator of G-protein si ( 205) 558 140.9 1.4e-33
NP_001095915 (OMIM: 602516) regulator of G-protein ( 302) 558 141.0 1.9e-33
NP_652760 (OMIM: 602189) regulator of G-protein si ( 311) 539 136.4 4.5e-32
XP_011517198 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_011517202 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_016870495 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_006717293 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_016870494 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_011517200 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
NP_001263189 (OMIM: 602189) regulator of G-protein ( 519) 535 135.6 1.4e-31
NP_001269851 (OMIM: 602189) regulator of G-protein ( 519) 535 135.6 1.4e-31
XP_006717289 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_011517199 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_011517203 (OMIM: 602189) PREDICTED: regulator o ( 519) 535 135.6 1.4e-31
XP_006717288 (OMIM: 602189) PREDICTED: regulator o ( 521) 535 135.6 1.4e-31
NP_001309144 (OMIM: 602189) regulator of G-protein ( 537) 535 135.6 1.4e-31
XP_011517196 (OMIM: 602189) PREDICTED: regulator o ( 545) 535 135.6 1.4e-31
NP_001263190 (OMIM: 602189) regulator of G-protein ( 591) 535 135.6 1.5e-31
XP_006717285 (OMIM: 602189) PREDICTED: regulator o ( 824) 535 135.7 2.1e-31
NP_570613 (OMIM: 602189) regulator of G-protein si ( 917) 535 135.7 2.3e-31
XP_016870493 (OMIM: 602189) PREDICTED: regulator o ( 961) 535 135.7 2.4e-31
XP_006717283 (OMIM: 602189) PREDICTED: regulator o (1086) 535 135.7 2.6e-31
NP_001269852 (OMIM: 602189) regulator of G-protein (1088) 535 135.7 2.6e-31
XP_006717282 (OMIM: 602189) PREDICTED: regulator o (1094) 535 135.7 2.6e-31
XP_016870492 (OMIM: 602189) PREDICTED: regulator o (1157) 535 135.7 2.8e-31
NP_652759 (OMIM: 602189) regulator of G-protein si (1198) 535 135.7 2.9e-31
NP_001263191 (OMIM: 602189) regulator of G-protein ( 168) 522 132.3 4.3e-31
NP_602299 (OMIM: 602189) regulator of G-protein si ( 168) 522 132.3 4.3e-31
NP_002914 (OMIM: 600861) regulator of G-protein si ( 211) 523 132.6 4.5e-31
NP_570138 (OMIM: 607192) regulator of G-protein si ( 235) 489 124.5 1.3e-28
NP_001106851 (OMIM: 602516) regulator of G-protein ( 187) 484 123.3 2.5e-28
NP_001034241 (OMIM: 612407) regulator of G-protein ( 152) 458 117.1 1.5e-26
NP_002913 (OMIM: 600323) regulator of G-protein si ( 209) 431 110.7 1.7e-24
NP_002918 (OMIM: 607190) regulator of G-protein si ( 159) 394 101.9 5.7e-22
>>NP_002919 (OMIM: 602514) regulator of G-protein signal (202 aa)
initn: 1329 init1: 1329 opt: 1329 Z-score: 1713.3 bits: 323.9 E(85289): 1.1e-88
Smith-Waterman score: 1329; 99.5% identity (100.0% similar) in 202 aa overlap (1-202:1-202)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_002 FICSEAPKEVNIDHETHELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
130 140 150 160 170 180
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
::::::::::::::::::::::
NP_002 AAQASAASATLSSCSLDEPSHT
190 200
>>XP_005245612 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
XP_005 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_005 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_005 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_005 LSQSQRRLS
180
>>XP_016858125 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
XP_016 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_016 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_016 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_016 LSQSQRRLS
180
>>XP_016858126 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
XP_016 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_016 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_016 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_016 LSQSQRRLS
180
>>XP_011508392 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
XP_011 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_011 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_011 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_011 LSQSQRRLS
180
>>NP_001095920 (OMIM: 607189) regulator of G-protein sig (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
NP_001 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
NP_001 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
NP_001 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
NP_001 LSQSQRRLS
180
>>XP_016858124 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 609 init1: 566 opt: 618 Z-score: 801.9 bits: 155.1 E(85289): 6.3e-38
Smith-Waterman score: 618; 58.8% identity (78.2% similar) in 170 aa overlap (15-184:9-175)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: : ..:::: . :::. .:. .. . .. : : .:..
XP_016 MAALLMPRRNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_016 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_016 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
120 130 140 150 160 170
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_016 LSQSQRRLS
180
>>XP_011508393 (OMIM: 607189) PREDICTED: regulator of G- (178 aa)
initn: 603 init1: 566 opt: 612 Z-score: 794.3 bits: 153.7 E(85289): 1.7e-37
Smith-Waterman score: 612; 58.9% identity (78.6% similar) in 168 aa overlap (17-184:9-173)
10 20 30 40 50 60
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
: ..:::: . :::. .:. .. . .. : : .:..
XP_011 MRTGQRQNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRALK--RLSTEEAT
10 20 30 40
70 80 90 100 110 120
pF1KB6 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
: .:::.::: : :::::.::::::::::::::::::::::: ::..::.:.::.::::
XP_011 RWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 FICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
:. .::.::::: .::: :: ::: . :::: ::::...:::::::::::.: : ::
XP_011 FVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDL
110 120 130 140 150 160
190 200
pF1KB6 AAQASAASATLSSCSLDEPSHT
.:.
XP_011 LSQSQRRLS
170
>>XP_011508391 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 603 init1: 566 opt: 612 Z-score: 793.5 bits: 153.7 E(85289): 1.8e-37
Smith-Waterman score: 612; 58.9% identity (78.6% similar) in 168 aa overlap (17-184:29-193)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKH
: ..:::: . :::. .:. .. . ..
XP_011 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRA
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 SKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSAT
: : .:.. : .:::.::: : :::::.::::::::::::::::::::::: ::..
XP_011 LK--RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTA
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 KLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSY
::.:.::.:::::. .::.::::: .::: :: ::: . :::: ::::...:::::::
XP_011 KLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSY
120 130 140 150 160 170
170 180 190 200
pF1KB6 PRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
::::.: : :: .:.
XP_011 PRFLRSKMYLDLLSQSQRRLS
180 190
>>XP_016858122 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 603 init1: 566 opt: 612 Z-score: 793.5 bits: 153.7 E(85289): 1.8e-37
Smith-Waterman score: 612; 58.9% identity (78.6% similar) in 168 aa overlap (17-184:29-193)
10 20 30 40
pF1KB6 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKH
: ..:::: . :::. .:. .. . ..
XP_016 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSD-SCSDFTAILPDKPNRA
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 SKENRNFSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSAT
: : .:.. : .:::.::: : :::::.::::::::::::::::::::::: ::..
XP_016 LK--RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTA
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 KLASRAHQIFEEFICSEAPKEVNIDHETRELTRMNLQTATATCFDAAQGKTRTLMEKDSY
::.:.::.:::::. .::.::::: .::: :: ::: . :::: ::::...:::::::
XP_016 KLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSY
120 130 140 150 160 170
170 180 190 200
pF1KB6 PRFLKSPAYRDLAAQASAASATLSSCSLDEPSHT
::::.: : :: .:.
XP_016 PRFLRSKMYLDLLSQSQRRLS
180 190
202 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:32:43 2016 done: Fri Nov 4 13:32:44 2016
Total Scan time: 4.670 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]