FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6925, 205 aa
  1>>>pF1KB6925 205 - 205 aa - 205 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2334+/-0.000339; mu= 5.3403+/- 0.021
 mean_var=122.9338+/-24.207, 0's: 0 Z-trim(118.6): 5  B-trim: 16 in 2/51
 Lambda= 0.115675
 statistics sampled from 31811 (31816) to 31811 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.373), width:  16
 Scan time:  6.010

The best scores are:                                      opt bits E(85289)
NP_006232 (OMIM: 601792) protein phosphatase inhib ( 205) 1332 232.6 3.5e-61
NP_001278433 (OMIM: 601792) protein phosphatase in ( 206) 1315 229.8 2.5e-60
XP_006713745 (OMIM: 601792) PREDICTED: protein pho ( 142)  891 158.9 3.6e-39
NP_001303254 (OMIM: 601792) protein phosphatase in ( 185)  839 150.3 1.9e-36
NP_001278434 (OMIM: 601792) protein phosphatase in ( 179)  662 120.7 1.4e-27


>>NP_006232 (OMIM: 601792) protein phosphatase inhibitor  (205 aa)
 initn: 1332 init1: 1332 opt: 1332  Z-score: 1219.5  bits: 232.6 E(85289): 3.5e-61
Smith-Waterman score: 1332; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KB6 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
              130       140       150       160       170       180

              190       200     
pF1KB6 ESMNTEESNQGSTPSDQQQNKLRSS
       :::::::::::::::::::::::::
NP_006 ESMNTEESNQGSTPSDQQQNKLRSS
              190       200     

>>NP_001278433 (OMIM: 601792) protein phosphatase inhibi  (206 aa)
 initn: 886 init1: 886 opt: 1315  Z-score: 1204.1  bits: 229.8 E(85289): 2.5e-60
Smith-Waterman score: 1315; 99.0% identity (99.5% similar) in 206 aa overlap (1-205:1-206)

               10        20        30        40        50        60
pF1KB6 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB6 SSGEEDSDLSPEER-EKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETAD
       :::::::::::::: .::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGEEDSDLSPEERGKKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETAD
              130       140       150       160       170       180

     180       190       200     
pF1KB6 GESMNTEESNQGSTPSDQQQNKLRSS
       ::::::::::::::::::::::::::
NP_001 GESMNTEESNQGSTPSDQQQNKLRSS
              190       200      

>>XP_006713745 (OMIM: 601792) PREDICTED: protein phospha  (142 aa)
 initn: 891 init1: 891 opt: 891  Z-score: 824.1  bits: 158.9 E(85289): 3.6e-39
Smith-Waterman score: 891; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB6 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
       :::::::::::::::::                                           
XP_006 SSGEEDSDLSPEEREKKSDNLK                                      
              130       140                                        

>>NP_001303254 (OMIM: 601792) protein phosphatase inhibi  (185 aa)
 initn: 834 init1: 834 opt: 839  Z-score: 775.5  bits: 150.3 E(85289): 1.9e-36
Smith-Waterman score: 839; 98.5% identity (98.5% similar) in 132 aa overlap (74-205:54-185)

            50        60        70        80        90       100   
pF1KB6 SQKWDEMNILATYHPADKDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARK
                                     :  :::::::::::::::::::::::::::
NP_001 WLCCPVQWLLTGTVIAHYSLELPTQVILPPPPPSMMGDDEDACSDTEATEAMAPDILARK
            30        40        50        60        70        80   

           110       120       130       140       150       160   
pF1KB6 LAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISK
            90       100       110       120       130       140   

           170       180       190       200     
pF1KB6 DLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNKLRSS
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 DLHDDDEDEEMLETADGESMNTEESNQGSTPSDQQQNKLRSS
           150       160       170       180     

>>NP_001278434 (OMIM: 601792) protein phosphatase inhibi  (179 aa)
 initn: 659 init1: 659 opt: 662  Z-score: 616.1  bits: 120.7 E(85289): 1.4e-27
Smith-Waterman score: 1095; 86.8% identity (87.3% similar) in 205 aa overlap (1-205:1-179)

               10        20        30        40        50        60
pF1KB6 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAASTASHRPIKGILKNKTSTTSSMVASAEQPRGNVDEELSKKSQKWDEMNILATYHPAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KDYGLMKIDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQE
       ::::::::::::::::                          .:::::::::::::::::
NP_001 KDYGLMKIDEPSTPYH--------------------------RLAAAEGLEPKYRIQEQE
               70                                  80        90    

              130       140       150       160       170       180
pF1KB6 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGEEDSDLSPEEREKKRQFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
          100       110       120       130       140       150    

              190       200     
pF1KB6 ESMNTEESNQGSTPSDQQQNKLRSS
       :::::::::::::::::::::::::
NP_001 ESMNTEESNQGSTPSDQQQNKLRSS
          160       170         




205 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:17:55 2016 done: Fri Nov  4 12:17:56 2016
 Total Scan time:  6.010 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]