Result of FASTA (ccds) for
pF1KB6948
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6948, 215 aa
1>>>pF1KB6948 215 - 215 aa - 215 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2103+/-0.000689; mu= 14.3458+/- 0.042
mean_var=63.4766+/-12.322, 0's: 0 Z-trim(110.1): 109 B-trim: 0 in 0/49
Lambda= 0.160978
statistics sampled from 11221 (11334) to 11221 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.348), width: 16
Scan time: 2.010
The best scores are: opt bits E(32554)
CCDS8626.1 KLRC1 gene_id:3821|Hs108|chr12 ( 215) 1458 346.6 6.8e-96
CCDS8625.1 KLRC1 gene_id:3821|Hs108|chr12 ( 233) 844 204.1 6.1e-53
CCDS31745.1 KLRC2 gene_id:3822|Hs108|chr12 ( 231) 811 196.4 1.2e-50
CCDS76531.1 KLRC1 gene_id:3821|Hs108|chr12 ( 228) 804 194.8 3.8e-50
CCDS41755.1 KLRC3 gene_id:3823|Hs108|chr12 ( 240) 664 162.3 2.4e-40
CCDS31744.1 KLRC3 gene_id:3823|Hs108|chr12 ( 257) 664 162.3 2.5e-40
CCDS8624.1 KLRC4 gene_id:8302|Hs108|chr12 ( 158) 364 92.5 1.6e-19
CCDS8599.1 KLRG1 gene_id:10219|Hs108|chr12 ( 189) 254 67.0 9.1e-12
CCDS8622.1 KLRD1 gene_id:3824|Hs108|chr12 ( 148) 251 66.2 1.2e-11
CCDS8621.1 KLRD1 gene_id:3824|Hs108|chr12 ( 179) 251 66.3 1.4e-11
CCDS5854.1 KLRG2 gene_id:346689|Hs108|chr7 ( 409) 249 66.0 3.9e-11
>>CCDS8626.1 KLRC1 gene_id:3821|Hs108|chr12 (215 aa)
initn: 1458 init1: 1458 opt: 1458 Z-score: 1835.1 bits: 346.6 E(32554): 6.8e-96
Smith-Waterman score: 1458; 99.5% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS86 MDNQGVIYSDLNLPPNPKRQQRKPKGNKNSILATEQEITYAELNLQKASQDFQGNDKTYH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPSRHCGHCPEEWITYSNSCYYIGKERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPSRHCGHCPEEWITYSNSCYYIGKERR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 TWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEI
130 140 150 160 170 180
190 200 210
pF1KB6 KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
:::::::::::::::::::::::::::::::::::
CCDS86 KDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
190 200 210
>>CCDS8625.1 KLRC1 gene_id:3821|Hs108|chr12 (233 aa)
initn: 844 init1: 844 opt: 844 Z-score: 1063.9 bits: 204.1 E(32554): 6.1e-53
Smith-Waterman score: 1412; 91.8% identity (92.3% similar) in 233 aa overlap (1-215:1-233)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS86 MDNQGVIYSDLNLPPNPKRQQRKPKGNKNSILATEQEITYAELNLQKASQDFQGNDKTYH
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPS------------------RHCGHCP
::::::::::::::::::::::::::::::::::: :::::::
CCDS86 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCP
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 EEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 EEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRN
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 SSHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 SSHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
190 200 210 220 230
>>CCDS31745.1 KLRC2 gene_id:3822|Hs108|chr12 (231 aa)
initn: 1103 init1: 811 opt: 811 Z-score: 1022.5 bits: 196.4 E(32554): 1.2e-50
Smith-Waterman score: 1113; 73.2% identity (83.5% similar) in 231 aa overlap (1-215:1-231)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
:..: .:...: .::::::::::::::: .::::: .:::::. : . :: :: :
CCDS31 MNKQRGTFSEVSLAQDPKRQQRKPKGNKSSISGTEQEIFQVELNLQNPSLNHQGIDKIYD
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVV-TIVVIP---------------SRHCGHCPEE
:. : :::: . .:::::..:::.:. :::.:: .:::::::::
CCDS31 CQGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPFLEQNNFSPNTRTQKARHCGHCPEE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 WITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSS
::::::::::::::::::::::::::::::::::::::::::::. : ::::::::::::
CCDS31 WITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSS
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 HHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
::::::.:::::::.:::::::::::::::::::::::::::.::::::::
CCDS31 HHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHCKHKL
190 200 210 220 230
>>CCDS76531.1 KLRC1 gene_id:3821|Hs108|chr12 (228 aa)
initn: 804 init1: 804 opt: 804 Z-score: 1013.8 bits: 194.8 E(32554): 3.8e-50
Smith-Waterman score: 1372; 91.7% identity (92.1% similar) in 228 aa overlap (1-210:1-228)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS76 MDNQGVIYSDLNLPPNPKRQQRKPKGNKNSILATEQEITYAELNLQKASQDFQGNDKTYH
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPS------------------RHCGHCP
::::::::::::::::::::::::::::::::::: :::::::
CCDS76 CKDLPSAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCP
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 EEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRN
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 SSHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SSHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYH
190 200 210 220
>>CCDS41755.1 KLRC3 gene_id:3823|Hs108|chr12 (240 aa)
initn: 967 init1: 398 opt: 664 Z-score: 837.8 bits: 162.3 E(32554): 2.4e-40
Smith-Waterman score: 960; 67.6% identity (79.1% similar) in 225 aa overlap (1-208:1-225)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
:..: .:...: .:: :::::::::::: .::::: .:::::.:: . :: :: :
CCDS41 MSKQRGTFSEVSLAQDPKWQQRKPKGNKSSISGTEQEIFQVELNLQNASLNHQGIDKIYD
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVV-TIVVIP---------------SRHCGHCPEE
:. : :::: . .:::::..:::.:. :::.:: .:::::::::
CCDS41 CQGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 WITYSNSCYYIGKERRTWEESLLACTSKNSS-LLSIDNEEEMKFLSIISPSSWIGVFRNS
:::::::::::::::::::::: ::.::::: :: ::::::::::. : :::::::::::
CCDS41 WITYSNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEMKFLASILPSSWIGVFRNS
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 SHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
:::::::.:::::::::::::.:: :::.:.: : : ::::: :
CCDS41 SHHPWVTINGLAFKHEIKDSDHAERNCAMLHVRGLISDQCGSSRIIRRGFIMLTRLVLNS
190 200 210 220 230 240
>>CCDS31744.1 KLRC3 gene_id:3823|Hs108|chr12 (257 aa)
initn: 967 init1: 398 opt: 664 Z-score: 837.3 bits: 162.3 E(32554): 2.5e-40
Smith-Waterman score: 960; 67.6% identity (79.1% similar) in 225 aa overlap (1-208:1-225)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
:..: .:...: .:: :::::::::::: .::::: .:::::.:: . :: :: :
CCDS31 MSKQRGTFSEVSLAQDPKWQQRKPKGNKSSISGTEQEIFQVELNLQNASLNHQGIDKIYD
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVV-TIVVIP---------------SRHCGHCPEE
:. : :::: . .:::::..:::.:. :::.:: .:::::::::
CCDS31 CQGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPFLEQNNSSPNARTQKARHCGHCPEE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 WITYSNSCYYIGKERRTWEESLLACTSKNSS-LLSIDNEEEMKFLSIISPSSWIGVFRNS
:::::::::::::::::::::: ::.::::: :: ::::::::::. : :::::::::::
CCDS31 WITYSNSCYYIGKERRTWEESLQACASKNSSSLLCIDNEEEMKFLASILPSSWIGVFRNS
130 140 150 160 170 180
170 180 190 200 210
pF1KB6 SHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
:::::::.:::::::::::::.:: :::.:.: : : ::::: :
CCDS31 SHHPWVTINGLAFKHEIKDSDHAERNCAMLHVRGLISDQCGSSRIIVSISFRIKALELAV
190 200 210 220 230 240
CCDS31 HQIKFYICSNRNDIMIA
250
>>CCDS8624.1 KLRC4 gene_id:8302|Hs108|chr12 (158 aa)
initn: 566 init1: 346 opt: 364 Z-score: 464.0 bits: 92.5 E(32554): 1.6e-19
Smith-Waterman score: 552; 61.5% identity (74.8% similar) in 143 aa overlap (1-124:1-143)
10 20 30 40 50 60
pF1KB6 MDNQGVIYSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYH
:..: ::...: .::::::: :::: :: .:.::: .:::::.::.: ::::::::
CCDS86 MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYH
10 20 30 40 50 60
70 80 90 100
pF1KB6 CKDLPSAPEKLIVGILGIICLILMASVV-TIVVIP------------------SRHCGHC
:: : :::: . .:::::..:::.:. :::.:: .::::::
CCDS86 CKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKARHCGHC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 PEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFR
:::::::::::::::::::::::
CCDS86 PEEWITYSNSCYYIGKERRTWEERVCWPVLRRTLICFL
130 140 150
>>CCDS8599.1 KLRG1 gene_id:10219|Hs108|chr12 (189 aa)
initn: 248 init1: 168 opt: 254 Z-score: 324.7 bits: 67.0 E(32554): 9.1e-12
Smith-Waterman score: 257; 28.5% identity (59.1% similar) in 186 aa overlap (38-212:5-185)
10 20 30 40 50 60
pF1KB6 YSDLNLPPNPKRQQRKPKGNKSSILATEQEITYAELNLQKASQDFQGNDKTYHCKDLPSA
. :. :.: :.: :: . :. :
CCDS85 MTDSVIYSMLELPTATQ--AQNDYGPQQKSSSSR
10 20 30
70 80 90 100 110
pF1KB6 PEK--LIVGILGIICLILMASVVT--IVVIPSRH-----CGHCPEEWITYSNSCYYIGKE
: :.. ::.. .:.. .. :. : . : ::..:. :.: :::.. :
CCDS85 PSCSCLVAIALGLLTAVLLSVLLYQWILCQGSNYSTCASCPSCPDRWMKYGNHCYYFSVE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB6 RRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPSS--WIGVFRNSSHHPWVTMNGLAF
.. :. :: : ...: :: : ...::..:... . :::. ::.: : . : :
CCDS85 EKDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLSEAFCWIGL-RNNSGWRWEDGSPLNF
100 110 120 130 140 150
180 190 200 210
pF1KB6 KHEIKDSDNAELNCAVLQVNRLKSAQCGSSIIYHCKHKL
.. .:.. .:.... : :....: . . ::
CCDS85 SR--ISSNSFVQTCGAINKNGLQASSCEVPLHWVCKKVRL
160 170 180
>>CCDS8622.1 KLRD1 gene_id:3824|Hs108|chr12 (148 aa)
initn: 207 init1: 186 opt: 251 Z-score: 322.6 bits: 66.2 E(32554): 1.2e-11
Smith-Waterman score: 251; 33.1% identity (62.8% similar) in 121 aa overlap (98-215:27-147)
70 80 90 100 110 120
pF1KB6 PEKLIVGILGIICLILMASVVTIVVIPSRHCGHCPEEWITYSNSCYYIGKERRTWEESLL
: : :.:. : .::.:..:..::.::
CCDS86 MAAFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRH
10 20 30 40 50
130 140 150 160 170 180
pF1KB6 ACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEIKDSDNA-
:.:..::::...: .:. :.: . :::. . : :. :: :... . : ..
CCDS86 LCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETF
60 70 80 90 100 110
190 200 210
pF1KB6 -ELNCAVLQVN-RLKSAQCGSSIIYHCKHKL
:: . . : . .: .. : ::..:
CCDS86 NTKNCIAYNPNGNALDESCEDKNRYICKQQLI
120 130 140
>>CCDS8621.1 KLRD1 gene_id:3824|Hs108|chr12 (179 aa)
initn: 244 init1: 186 opt: 251 Z-score: 321.3 bits: 66.3 E(32554): 1.4e-11
Smith-Waterman score: 272; 31.4% identity (56.2% similar) in 169 aa overlap (70-215:10-178)
40 50 60 70 80 90
pF1KB6 YAELNLQKASQDFQGNDKTYHCKDLPSAPEKLIVGILGIICLILMA--------SVVTIV
.:: : :::::: ::. : . .
CCDS86 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLS
10 20 30
100 110 120 130
pF1KB6 VIPS------------RHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSI
. :. : : :.:. : .::.:..:..::.:: :.:..::::..
CCDS86 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 DNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEIKDSDNA--ELNCAVLQVN-
.: .:. :.: . :::. . : :. :: :... . : .. :: . . :
CCDS86 QNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNG
100 110 120 130 140 150
200 210
pF1KB6 RLKSAQCGSSIIYHCKHKL
. .: .. : ::..:
CCDS86 NALDESCEDKNRYICKQQLI
160 170
215 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:34:24 2016 done: Sat Nov 5 07:34:24 2016
Total Scan time: 2.010 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]