Result of FASTA (omim) for pF1KB6952
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6952, 235 aa
  1>>>pF1KB6952 235 - 235 aa - 235 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5539+/-0.000374; mu= 13.6565+/- 0.023
 mean_var=72.0282+/-14.416, 0's: 0 Z-trim(113.3): 161  B-trim: 805 in 1/51
 Lambda= 0.151120
 statistics sampled from 22370 (22543) to 22370 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.264), width:  16
 Scan time:  6.010

The best scores are:                                      opt bits E(85289)
NP_570138 (OMIM: 607192) regulator of G-protein si ( 235) 1544 345.5 4.5e-95
XP_011508193 (OMIM: 607192) PREDICTED: regulator o ( 144)  939 213.5 1.5e-55
NP_002914 (OMIM: 600861) regulator of G-protein si ( 211)  547 128.1 1.1e-29
NP_003608 (OMIM: 145500,603276) regulator of G-pro ( 181)  543 127.2 1.8e-29
NP_001241678 (OMIM: 145500,603276) regulator of G- ( 185)  525 123.3 2.8e-28
NP_203131 (OMIM: 607189) regulator of G-protein si ( 198)  525 123.3   3e-28
XP_016858120 (OMIM: 607189) PREDICTED: regulator o ( 198)  525 123.3   3e-28
XP_016858121 (OMIM: 607189) PREDICTED: regulator o ( 198)  525 123.3   3e-28
XP_011508391 (OMIM: 607189) PREDICTED: regulator o ( 198)  525 123.3   3e-28
XP_016858123 (OMIM: 607189) PREDICTED: regulator o ( 198)  525 123.3   3e-28
XP_016858122 (OMIM: 607189) PREDICTED: regulator o ( 198)  525 123.3   3e-28
XP_011508392 (OMIM: 607189) PREDICTED: regulator o ( 180)  521 122.4   5e-28
XP_005245612 (OMIM: 607189) PREDICTED: regulator o ( 180)  521 122.4   5e-28
XP_016858125 (OMIM: 607189) PREDICTED: regulator o ( 180)  521 122.4   5e-28
NP_001095920 (OMIM: 607189) regulator of G-protein ( 180)  521 122.4   5e-28
XP_016858124 (OMIM: 607189) PREDICTED: regulator o ( 180)  521 122.4   5e-28
XP_016858126 (OMIM: 607189) PREDICTED: regulator o ( 180)  521 122.4   5e-28
NP_005604 (OMIM: 602516) regulator of G-protein si ( 205)  517 121.6   1e-27
XP_011508393 (OMIM: 607189) PREDICTED: regulator o ( 178)  515 121.1 1.2e-27
NP_001095915 (OMIM: 602516) regulator of G-protein ( 302)  517 121.7 1.4e-27
XP_006717293 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_011517199 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_016870494 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_011517203 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_011517202 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
NP_001269851 (OMIM: 602189) regulator of G-protein ( 519)  520 122.5 1.4e-27
XP_011517198 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_016870495 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_006717289 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
NP_001263189 (OMIM: 602189) regulator of G-protein ( 519)  520 122.5 1.4e-27
XP_011517200 (OMIM: 602189) PREDICTED: regulator o ( 519)  520 122.5 1.4e-27
XP_006717288 (OMIM: 602189) PREDICTED: regulator o ( 521)  520 122.5 1.4e-27
NP_001309144 (OMIM: 602189) regulator of G-protein ( 537)  520 122.5 1.5e-27
XP_011517196 (OMIM: 602189) PREDICTED: regulator o ( 545)  520 122.5 1.5e-27
NP_001263190 (OMIM: 602189) regulator of G-protein ( 591)  520 122.5 1.6e-27
XP_006717285 (OMIM: 602189) PREDICTED: regulator o ( 824)  520 122.6 2.1e-27
NP_570613 (OMIM: 602189) regulator of G-protein si ( 917)  520 122.6 2.3e-27
XP_016870493 (OMIM: 602189) PREDICTED: regulator o ( 961)  520 122.6 2.4e-27
XP_006717283 (OMIM: 602189) PREDICTED: regulator o (1086)  520 122.6 2.6e-27
NP_001269852 (OMIM: 602189) regulator of G-protein (1088)  520 122.6 2.6e-27
XP_006717282 (OMIM: 602189) PREDICTED: regulator o (1094)  520 122.6 2.6e-27
XP_016870492 (OMIM: 602189) PREDICTED: regulator o (1157)  520 122.7 2.8e-27
NP_652759 (OMIM: 602189) regulator of G-protein si (1198)  520 122.7 2.8e-27
NP_652760 (OMIM: 602189) regulator of G-protein si ( 311)  512 120.6 3.1e-27
NP_001106851 (OMIM: 602516) regulator of G-protein ( 187)  506 119.2   5e-27
NP_001263191 (OMIM: 602189) regulator of G-protein ( 168)  501 118.1 9.7e-27
NP_602299 (OMIM: 602189) regulator of G-protein si ( 168)  501 118.1 9.7e-27
NP_001034241 (OMIM: 612407) regulator of G-protein ( 152)  491 115.9   4e-26
NP_002919 (OMIM: 602514) regulator of G-protein si ( 202)  486 114.8 1.1e-25
NP_002913 (OMIM: 600323) regulator of G-protein si ( 209)  456 108.3   1e-23


>>NP_570138 (OMIM: 607192) regulator of G-protein signal  (235 aa)
 initn: 1544 init1: 1544 opt: 1544  Z-score: 1827.8  bits: 345.5 E(85289): 4.5e-95
Smith-Waterman score: 1544; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235)

               10        20        30        40        50        60
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKEETSKEAKIRAKEKRNRLSLLVQKPEFHED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 METTLLFFSQINMCESKEKTFFKLIHGSGKEETSKEAKIRAKEKRNRLSLLVQKPEFHED
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TRSSRSGHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 TRSSRSGHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 DFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRV
              130       140       150       160       170       180

              190       200       210       220       230     
pF1KB6 YQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 YQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
              190       200       210       220       230     

>>XP_011508193 (OMIM: 607192) PREDICTED: regulator of G-  (144 aa)
 initn: 939 init1: 939 opt: 939  Z-score: 1118.2  bits: 213.5 E(85289): 1.5e-55
Smith-Waterman score: 939; 100.0% identity (100.0% similar) in 141 aa overlap (95-235:4-144)

           70        80        90       100       110       120    
pF1KB6 RSGHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKK
                                     ::::::::::::::::::::::::::::::
XP_011                            MQLDGLEAFTRFLKTEFSEENIEFWIACEDFKK
                                          10        20        30   

          130       140       150       160       170       180    
pF1KB6 SKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLM
            40        50        60        70        80        90   

          190       200       210       220       230     
pF1KB6 EQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
           100       110       120       130       140    

>>NP_002914 (OMIM: 600861) regulator of G-protein signal  (211 aa)
 initn: 542 init1: 521 opt: 547  Z-score: 653.8  bits: 128.1 E(85289): 1.1e-29
Smith-Waterman score: 547; 42.9% identity (71.2% similar) in 205 aa overlap (6-207:5-203)

               10        20        30        40           50       
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKEETSKEAKIRA---KEKRNRLSLLVQKPEF
            .:..  . :.  .:.      :::..   :. :..    :. ..::: ..:.   
NP_002  MQSAMFLAVQHDCRPMDKS-----AGSGHKSEEKREKMKRTLLKDWKTRLSYFLQNSST
                10             20        30        40        50    

        60        70        80        90       100       110       
pF1KB6 HEDTRSSRSGHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWI
           .......     . :::::  :.:.::.::. . :: ::  :::.:: :::::::.
NP_002 PGKPKTGKKSKQQAFIKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWL
           60        70        80        90       100       110    

       120       130       140       150       160       170       
pF1KB6 ACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQ
       :::::::.:.::..  ::. ::  ::. .::::.:.::.:: .:...: . :   : .::
NP_002 ACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQ
          120       130       140       150       160       170    

       180       190       200       210       220       230     
pF1KB6 SRVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:::.:::..:: :::.:..: :: . .::                            
NP_002 KRVYSLMENNSYPRFLESEFYQDLCK-KPQITTEPHAT                    
          180       190       200        210                     

>>NP_003608 (OMIM: 145500,603276) regulator of G-protein  (181 aa)
 initn: 554 init1: 506 opt: 543  Z-score: 650.1  bits: 127.2 E(85289): 1.8e-29
Smith-Waterman score: 543; 49.1% identity (77.2% similar) in 167 aa overlap (40-203:15-181)

      10        20        30        40        50        60         
pF1KB6 QINMCESKEKTFFKLIHGSGKEETSKEAKIRAKEKRNRLSLLVQKPEFHEDT---RSSRS
                                     :::: . .:..:.:::.   :     . . 
NP_003                 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKP
                               10        20        30        40    

         70        80        90       100       110       120      
pF1KB6 GHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSK
        . ::  ..: .::..: .:.::::..  :: .:  :::.::::::.::::::::.:: :
NP_003 EKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIK
           50        60        70        80        90       100    

        130       140       150       160       170       180      
pF1KB6 GPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQSRVYQLMEQ
       .: ..  ::: :::.::::.::::::.:  ::..  .....:.: ::: ::.:.. :::.
NP_003 SPAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEK
          110       120       130       140       150       160    

        190       200       210       220       230     
pF1KB6 DSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       ::  ::..:..: .:..                                
NP_003 DSLPRFVRSEFYQELIK                                
          170       180                                 

>>NP_001241678 (OMIM: 145500,603276) regulator of G-prot  (185 aa)
 initn: 550 init1: 343 opt: 525  Z-score: 628.7  bits: 123.3 E(85289): 2.8e-28
Smith-Waterman score: 525; 48.0% identity (75.4% similar) in 171 aa overlap (40-203:15-185)

      10        20        30        40        50        60         
pF1KB6 QINMCESKEKTFFKLIHGSGKEETSKEAKIRAKEKRNRLSLLVQKPEFHEDT---RSSRS
                                     :::: . .:..:.:::.   :     . . 
NP_001                 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKP
                               10        20        30        40    

         70        80        90       100       110       120      
pF1KB6 GHLAKETRVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSK
        . ::  ..: .::..: .:.::::..  :: .:  :::.::::::.::::::::.:: :
NP_001 EKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIK
           50        60        70        80        90       100    

        130       140       150           160       170       180  
pF1KB6 GPQQIHLKAKAIYEKFIQTDAPKEV----NLDFHTKEVITNSITQPTLHSFDAAQSRVYQ
       .: ..  ::: :::.::::.:::::    :.:  ::..  .....:.: ::: ::.:.. 
NP_001 SPAKMAEKAKQIYEEFIQTEAPKEVGLWVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHA
          110       120       130       140       150       160    

            190       200       210       220       230     
pF1KB6 LMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       :::.::  ::..:..: .:..                                
NP_001 LMEKDSLPRFVRSEFYQELIK                                
          170       180                                     

>>NP_203131 (OMIM: 607189) regulator of G-protein signal  (198 aa)
 initn: 496 init1: 496 opt: 525  Z-score: 628.3  bits: 123.3 E(85289): 3e-28
Smith-Waterman score: 525; 43.8% identity (73.5% similar) in 185 aa overlap (26-208:12-196)

               10        20        30         40        50         
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKE-ETSKEAKIRAKEKRNRLSLLVQKPEFHE
                                :  ::. .. . .. . :  :.::. : .: .   
NP_203               MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCS
                             10        20        30        40      

      60        70         80        90       100       110        
pF1KB6 DTRSSRSGHLAKET-RVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIA
       :  .    .  .   :.: :::..:..::: ::::. :. ::  ::::::::::.:::.:
NP_203 DFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLA
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KB6 CEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQS
       ::.:::...  ..  ::. :.:.:....::.:::.::.:.:.  ... .:.:  :: ::.
NP_203 CEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQG
        110       120       130       140       150       160      

      180       190       200       210       220       230     
pF1KB6 RVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:..:::.::: :::.: .::::.    .:                           
NP_203 KVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS                         
        170       180       190                                 

>>XP_016858120 (OMIM: 607189) PREDICTED: regulator of G-  (198 aa)
 initn: 496 init1: 496 opt: 525  Z-score: 628.3  bits: 123.3 E(85289): 3e-28
Smith-Waterman score: 525; 43.8% identity (73.5% similar) in 185 aa overlap (26-208:12-196)

               10        20        30         40        50         
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKE-ETSKEAKIRAKEKRNRLSLLVQKPEFHE
                                :  ::. .. . .. . :  :.::. : .: .   
XP_016               MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCS
                             10        20        30        40      

      60        70         80        90       100       110        
pF1KB6 DTRSSRSGHLAKET-RVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIA
       :  .    .  .   :.: :::..:..::: ::::. :. ::  ::::::::::.:::.:
XP_016 DFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLA
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KB6 CEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQS
       ::.:::...  ..  ::. :.:.:....::.:::.::.:.:.  ... .:.:  :: ::.
XP_016 CEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQG
        110       120       130       140       150       160      

      180       190       200       210       220       230     
pF1KB6 RVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:..:::.::: :::.: .::::.    .:                           
XP_016 KVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS                         
        170       180       190                                 

>>XP_016858121 (OMIM: 607189) PREDICTED: regulator of G-  (198 aa)
 initn: 496 init1: 496 opt: 525  Z-score: 628.3  bits: 123.3 E(85289): 3e-28
Smith-Waterman score: 525; 43.8% identity (73.5% similar) in 185 aa overlap (26-208:12-196)

               10        20        30         40        50         
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKE-ETSKEAKIRAKEKRNRLSLLVQKPEFHE
                                :  ::. .. . .. . :  :.::. : .: .   
XP_016               MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCS
                             10        20        30        40      

      60        70         80        90       100       110        
pF1KB6 DTRSSRSGHLAKET-RVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIA
       :  .    .  .   :.: :::..:..::: ::::. :. ::  ::::::::::.:::.:
XP_016 DFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLA
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KB6 CEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQS
       ::.:::...  ..  ::. :.:.:....::.:::.::.:.:.  ... .:.:  :: ::.
XP_016 CEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQG
        110       120       130       140       150       160      

      180       190       200       210       220       230     
pF1KB6 RVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:..:::.::: :::.: .::::.    .:                           
XP_016 KVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS                         
        170       180       190                                 

>>XP_011508391 (OMIM: 607189) PREDICTED: regulator of G-  (198 aa)
 initn: 496 init1: 496 opt: 525  Z-score: 628.3  bits: 123.3 E(85289): 3e-28
Smith-Waterman score: 525; 43.8% identity (73.5% similar) in 185 aa overlap (26-208:12-196)

               10        20        30         40        50         
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKE-ETSKEAKIRAKEKRNRLSLLVQKPEFHE
                                :  ::. .. . .. . :  :.::. : .: .   
XP_011               MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCS
                             10        20        30        40      

      60        70         80        90       100       110        
pF1KB6 DTRSSRSGHLAKET-RVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIA
       :  .    .  .   :.: :::..:..::: ::::. :. ::  ::::::::::.:::.:
XP_011 DFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLA
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KB6 CEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQS
       ::.:::...  ..  ::. :.:.:....::.:::.::.:.:.  ... .:.:  :: ::.
XP_011 CEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQG
        110       120       130       140       150       160      

      180       190       200       210       220       230     
pF1KB6 RVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:..:::.::: :::.: .::::.    .:                           
XP_011 KVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS                         
        170       180       190                                 

>>XP_016858123 (OMIM: 607189) PREDICTED: regulator of G-  (198 aa)
 initn: 496 init1: 496 opt: 525  Z-score: 628.3  bits: 123.3 E(85289): 3e-28
Smith-Waterman score: 525; 43.8% identity (73.5% similar) in 185 aa overlap (26-208:12-196)

               10        20        30         40        50         
pF1KB6 METTLLFFSQINMCESKEKTFFKLIHGSGKE-ETSKEAKIRAKEKRNRLSLLVQKPEFHE
                                :  ::. .. . .. . :  :.::. : .: .   
XP_016               MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCS
                             10        20        30        40      

      60        70         80        90       100       110        
pF1KB6 DTRSSRSGHLAKET-RVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIA
       :  .    .  .   :.: :::..:..::: ::::. :. ::  ::::::::::.:::.:
XP_016 DFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLA
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KB6 CEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVITNSITQPTLHSFDAAQS
       ::.:::...  ..  ::. :.:.:....::.:::.::.:.:.  ... .:.:  :: ::.
XP_016 CEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQG
        110       120       130       140       150       160      

      180       190       200       210       220       230     
pF1KB6 RVYQLMEQDSYTRFLKSDIYLDLMEGRPQRPTNLRRRSRSFTCNEFQDVQSDVAIWL
       .:..:::.::: :::.: .::::.    .:                           
XP_016 KVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS                         
        170       180       190                                 




235 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:43:54 2016 done: Sat Nov  5 18:43:55 2016
 Total Scan time:  6.010 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com