Result of FASTA (ccds) for
pF1KB6969
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6969, 216 aa
1>>>pF1KB6969 216 - 216 aa - 216 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9861+/-0.000896; mu= 15.2734+/- 0.054
mean_var=69.5094+/-13.953, 0's: 0 Z-trim(106.5): 213 B-trim: 263 in 1/48
Lambda= 0.153834
statistics sampled from 8796 (9038) to 8796 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.278), width: 16
Scan time: 1.670
The best scores are: opt bits E(32554)
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 1412 322.2 1.5e-88
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 1412 322.3 1.7e-88
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 1228 281.4 3e-76
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 1190 273.0 1e-73
CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 ( 201) 825 191.9 2.4e-49
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 615 145.3 2.5e-35
CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 ( 174) 614 145.0 2.7e-35
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 592 140.2 8.5e-34
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 587 139.1 2e-33
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 556 132.2 2.3e-31
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 547 130.3 9.7e-31
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 546 130.0 1e-30
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 544 129.6 1.4e-30
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 543 129.4 1.7e-30
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 539 128.5 3.1e-30
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 501 120.0 1.1e-27
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 501 120.0 1.1e-27
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 498 119.4 1.7e-27
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 497 119.2 2e-27
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 495 118.7 2.8e-27
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 494 118.5 3.7e-27
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 488 117.2 8.2e-27
CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 488 117.2 9.3e-27
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 484 116.2 1.4e-26
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 479 115.2 3.3e-26
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 477 114.7 4.5e-26
CCDS34300.1 RAB24 gene_id:53917|Hs108|chr5 ( 203) 476 114.5 4.9e-26
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 473 113.8 8e-26
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 472 113.6 9.2e-26
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 472 113.6 9.8e-26
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 470 113.1 1.2e-25
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 470 113.2 1.3e-25
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 470 113.2 1.4e-25
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 469 112.9 1.5e-25
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 468 112.7 1.8e-25
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 466 112.3 2.3e-25
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 465 112.0 2.8e-25
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX ( 221) 465 112.1 2.9e-25
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 458 110.5 8e-25
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 457 110.3 1.1e-24
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 447 108.0 4.2e-24
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 441 106.7 1.1e-23
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 438 106.1 1.9e-23
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 436 105.5 1.9e-23
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 437 105.8 2e-23
CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 436 105.5 2.1e-23
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 430 104.2 5.6e-23
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 418 101.7 4.3e-22
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 412 100.3 9.7e-22
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 412 100.3 9.9e-22
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1703.1 bits: 322.2 E(32554): 1.5e-88
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::::::::::::::::::::::::::::::
CCDS11 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1702.3 bits: 322.3 E(32554): 1.7e-88
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:34-249)
10 20 30
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGES
::::::::::::::::::::::::::::::
CCDS58 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
pF1KB6 SQCCSN
::::::
CCDS58 SQCCSN
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1482.5 bits: 281.4 E(32554): 3e-76
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
CCDS26 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
CCDS26 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
CCDS26 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::: . .:.::::: : . .:.:::::
CCDS26 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
180 190 200 210
>>CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 (215 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1436.9 bits: 273.0 E(32554): 1e-73
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
CCDS89 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
CCDS89 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
CCDS89 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
CCDS89 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
>>CCDS77710.1 RAB5A gene_id:5868|Hs108|chr3 (201 aa)
initn: 825 init1: 825 opt: 825 Z-score: 999.5 bits: 191.9 E(32554): 2.4e-49
Smith-Waterman score: 1101; 80.6% identity (88.4% similar) in 216 aa overlap (1-216:1-201)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.::::::
CCDS77 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG-----
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:::::::::::::::::::::::::::::::::::: ..::::::::::::
CCDS77 ---------VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
CCDS77 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
110 120 130 140 150 160
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::: . .:.::::: : . .:.:::::
CCDS77 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
170 180 190 200
>>CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 (194 aa)
initn: 581 init1: 581 opt: 615 Z-score: 747.8 bits: 145.3 E(32554): 2.5e-35
Smith-Waterman score: 615; 47.9% identity (77.8% similar) in 194 aa overlap (21-214:5-194)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
..:. :::...:::::.: :::. .: . ::::.:.:
CCDS33 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMT
10 20 30 40
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
.:: .. :: :::::::::...::::::::. :::.:::::. .::. :::::::.
CCDS33 KTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELR
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
... ::::.:.:::: :: . : : ..:. :::. .:.:::::.:.:.::.:. :..
CCDS33 QHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISR
110 120 130 140 150 160
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
..:... .. :. ..: :... . .::
CCDS33 RIPSTD----ANLPSGGKGFKLRRQPSEPKRSCC
170 180 190
>>CCDS58244.1 RAB5B gene_id:5869|Hs108|chr12 (174 aa)
initn: 612 init1: 612 opt: 614 Z-score: 747.3 bits: 145.0 E(32554): 2.7e-35
Smith-Waterman score: 885; 69.0% identity (76.9% similar) in 216 aa overlap (1-216:1-174)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
CCDS58 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.:::::::::::::::::::::::::::::::::::::::::::
CCDS58 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN---------------
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::..:.::::
CCDS58 --------------------------QEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
110 120 130
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
CCDS58 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
140 150 160 170
>>CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 (195 aa)
initn: 557 init1: 557 opt: 592 Z-score: 720.2 bits: 140.2 E(32554): 8.5e-34
Smith-Waterman score: 592; 45.9% identity (76.0% similar) in 196 aa overlap (19-214:4-195)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
: ..:. :::...:::::.: :::. .: . ::::.:.:
CCDS45 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMT
10 20 30 40
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
.:: . :: :::::::::.::::::::::. ::..:::::. :.: :.:::::.
CCDS45 KTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
... :::.:.:::: ::.. : : ...:. ::.. . . .:::::.:.:..:.:..:..
CCDS45 EHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISR
110 120 130 140 150 160
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
..: .:.. : : . ... . . .::
CCDS45 QIPPLDPHEN----GNNGTIKVEKPTMQASRRCC
170 180 190
>>CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 (212 aa)
initn: 515 init1: 273 opt: 587 Z-score: 713.7 bits: 139.1 E(32554): 2e-33
Smith-Waterman score: 587; 44.7% identity (78.8% similar) in 208 aa overlap (10-216:8-212)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:. :: .. ::::::: ..::::::.::.::..:. :.: ::.:
CCDS25 MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
..: . :..:.:::::::::.:::. .:.:::.::..::::: :.: .:..:.:.:.
CCDS25 KVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLE
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 RQASPN-IVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
.. :. ... :.:::.::...: : :::.. .::...::::::::: .:.:.: ..:
CCDS25 EELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVA
120 130 140 150 160 170
180 190 200 210
pF1KB6 KKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
..: . ... . : . .: :... :: ...::..
CCDS25 QELLQRSDEEGQALRG-DAAVALNKG-PARQAKCCAH
180 190 200 210
>>CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 (208 aa)
initn: 554 init1: 537 opt: 556 Z-score: 676.6 bits: 132.2 E(32554): 2.3e-31
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (12-214:4-208)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
: :: . .::::.:::..:::.::. ::. .: . ..::: ::.
CCDS30 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
.:. :.: ::....::::::::..:: : : : . .:.::::::: ..: ....:. ...
CCDS30 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
. . ...: :.:::.:::.:: . ..:.. : . :..:.::::::..::...: .:.
CCDS30 TERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAS
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
:: : . . : . .: .. :::.. : :
CCDS30 ALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
180 190 200
216 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:08:17 2016 done: Fri Nov 4 11:08:17 2016
Total Scan time: 1.670 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]