Result of FASTA (omim) for
pF1KB6969
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6969, 216 aa
1>>>pF1KB6969 216 - 216 aa - 216 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6411+/-0.000406; mu= 17.5103+/- 0.026
mean_var=73.9286+/-15.059, 0's: 0 Z-trim(113.1): 460 B-trim: 1086 in 2/49
Lambda= 0.149165
statistics sampled from 21773 (22304) to 21773 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.262), width: 16
Scan time: 5.000
The best scores are: opt bits E(85289)
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 1412 313.0 2.4e-85
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 1412 313.0 2.4e-85
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1412 313.0 2.4e-85
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1412 313.0 2.4e-85
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 1412 313.1 2.6e-85
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 1228 273.4 2e-73
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 1190 265.2 5.7e-71
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 1190 265.2 5.7e-71
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 1190 265.2 5.7e-71
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 1190 265.2 5.7e-71
NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201) 825 186.6 2.4e-47
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 615 141.4 9.4e-34
NP_001238966 (OMIM: 179514) ras-related protein Ra ( 174) 614 141.2 1e-33
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 592 136.5 2.9e-32
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 587 135.5 6.5e-32
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 564 130.6 2.2e-30
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 564 130.6 2.3e-30
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 556 128.8 6.6e-30
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 547 126.9 2.7e-29
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 546 126.6 2.9e-29
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 544 126.2 3.9e-29
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 543 126.0 4.6e-29
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 539 125.1 8.3e-29
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 501 117.0 2.5e-26
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 501 117.0 2.5e-26
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 498 116.3 3.8e-26
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 497 116.1 4.4e-26
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 496 115.8 4.8e-26
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 495 115.7 6.1e-26
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 488 114.2 1.7e-25
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 488 114.2 1.9e-25
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 484 113.3 3e-25
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 479 112.2 6.6e-25
NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203) 476 111.5 9.8e-25
NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203) 476 111.5 9.8e-25
XP_006712752 (OMIM: 602206) PREDICTED: ras-related ( 190) 473 110.9 1.5e-24
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 473 110.9 1.6e-24
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 472 110.7 1.8e-24
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 472 110.7 1.8e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 472 110.7 1.8e-24
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 472 110.7 1.8e-24
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 472 110.7 1.9e-24
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 470 110.2 2.4e-24
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 470 110.3 2.5e-24
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 470 110.3 2.6e-24
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 469 110.1 2.9e-24
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 468 109.9 3.4e-24
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 466 109.4 4.4e-24
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 458 107.7 1.5e-23
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 457 107.6 2e-23
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1653.3 bits: 313.0 E(85289): 2.4e-85
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::::::::::::::::::::::::::::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1653.3 bits: 313.0 E(85289): 2.4e-85
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::::::::::::::::::::::::::::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1653.3 bits: 313.0 E(85289): 2.4e-85
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::::::::::::::::::::::::::::::
NP_004 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1653.3 bits: 313.0 E(85289): 2.4e-85
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::::::::::::::::::::::::::::::
NP_958 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1652.5 bits: 313.1 E(85289): 2.6e-85
Smith-Waterman score: 1412; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:34-249)
10 20 30
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGES
::::::::::::::::::::::::::::::
NP_001 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
pF1KB6 SQCCSN
::::::
NP_001 SQCCSN
>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1439.3 bits: 273.4 E(85289): 2e-73
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
NP_004 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
NP_004 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::::::: . .:.::::: : . .:.:::::
NP_004 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
180 190 200 210
>>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B (215 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1395.1 bits: 265.2 E(85289): 5.7e-71
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
NP_001 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
NP_001 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
NP_001 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
NP_001 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
>>NP_002859 (OMIM: 179514) ras-related protein Rab-5B is (215 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1395.1 bits: 265.2 E(85289): 5.7e-71
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
NP_002 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
NP_002 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
NP_002 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
NP_002 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
>>XP_005269109 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1395.1 bits: 265.2 E(85289): 5.7e-71
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
XP_005 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
XP_005 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
XP_005 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
XP_005 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
>>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1188 init1: 1188 opt: 1190 Z-score: 1395.1 bits: 265.2 E(85289): 5.7e-71
Smith-Waterman score: 1190; 84.3% identity (94.9% similar) in 216 aa overlap (1-216:1-215)
10 20 30 40 50 60
pF1KB6 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
:..:. .::::: ..:::::::::::::::::::::::::::::::::::::::::::
XP_005 MTSRS-TARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
:.::::::::::::::::::::::::::::::::::::::::::: .::::::.::::::
XP_005 QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
:::::.:::::::::::::.:: ::..:::::::::::::::::::::::::..:.::::
XP_005 RQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAK
120 130 140 150 160 170
190 200 210
pF1KB6 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
::::.:::: :: ::.:::::.:.. ..::::::
XP_005 KLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
216 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:08:18 2016 done: Fri Nov 4 11:08:18 2016
Total Scan time: 5.000 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]