Result of FASTA (ccds) for
pF1KB6971
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6971, 216 aa
1>>>pF1KB6971 216 - 216 aa - 216 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7765+/-0.000727; mu= 15.8657+/- 0.044
mean_var=54.8438+/-10.931, 0's: 0 Z-trim(107.8): 40 B-trim: 2 in 1/48
Lambda= 0.173185
statistics sampled from 9742 (9782) to 9742 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.3), width: 16
Scan time: 1.780
The best scores are: opt bits E(32554)
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 ( 216) 1425 363.7 4.8e-101
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 ( 212) 924 238.6 2.3e-63
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 ( 165) 699 182.3 1.6e-46
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 ( 207) 684 178.6 2.5e-45
CCDS443.1 PPIE gene_id:10450|Hs108|chr1 ( 301) 653 170.9 7.4e-43
CCDS3801.1 PPID gene_id:5481|Hs108|chr4 ( 370) 633 166.0 2.8e-41
CCDS469.1 PPIH gene_id:10465|Hs108|chr1 ( 177) 617 161.8 2.4e-40
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 ( 164) 601 157.8 3.6e-39
CCDS442.1 PPIE gene_id:10450|Hs108|chr1 ( 296) 600 157.7 7.1e-39
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 ( 314) 600 157.7 7.4e-39
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2 ( 754) 604 158.9 7.7e-39
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 ( 164) 586 154.0 4.9e-38
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3 (1462) 594 156.6 7.5e-38
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 ( 164) 582 153.0 9.8e-38
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 ( 164) 582 153.0 9.8e-38
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 ( 164) 582 153.0 9.8e-38
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 ( 164) 581 152.8 1.2e-37
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224) 589 155.5 3.4e-37
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1 ( 134) 514 136.0 1.1e-32
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 ( 166) 485 128.8 2e-30
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7 ( 105) 476 126.4 6.4e-30
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6 ( 279) 450 120.2 1.3e-27
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6 ( 311) 450 120.2 1.4e-27
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 ( 490) 444 118.8 5.8e-27
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 ( 616) 444 118.9 7e-27
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 ( 646) 444 118.9 7.3e-27
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 ( 161) 392 105.6 1.9e-23
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 ( 520) 363 98.6 7.5e-21
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 ( 527) 363 98.6 7.6e-21
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 ( 381) 326 89.3 3.5e-18
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5 ( 472) 326 89.3 4.2e-18
CCDS34550.1 PPIL4 gene_id:85313|Hs108|chr6 ( 492) 288 79.9 3.2e-15
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2 ( 165) 268 74.6 4.1e-14
>>CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 (216 aa)
initn: 1425 init1: 1425 opt: 1425 Z-score: 1927.5 bits: 363.7 E(32554): 4.8e-101
Smith-Waterman score: 1425; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVR
130 140 150 160 170 180
190 200 210
pF1KB6 KVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
::::::::::::::::::::::::::::::::::::
CCDS10 KVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
190 200 210
>>CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 (212 aa)
initn: 934 init1: 907 opt: 924 Z-score: 1251.1 bits: 238.6 E(32554): 2.3e-63
Smith-Waterman score: 924; 66.7% identity (85.3% similar) in 204 aa overlap (10-213:6-207)
10 20 30 40 50 60
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRV
..:: .: .: ... : : .:.::.::.::.::.::::.::::.
CCDS41 MGPGPRLLLPLVLCVGLGALVFSSG--AEGFRKRGPSVTAKVFFDVRIGDKDVGRI
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 IFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYG
..:::::.:::::.:::::::::::.:::.::::::::::::::::.: :::::: ::::
CCDS41 VIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 ERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVR
: :::::::::::: ::::::::: :::::::::: .: .::::::::::::..:: ::.
CCDS41 ETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVH
120 130 140 150 160 170
190 200 210
pF1KB6 KVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
..: ::..:.:: . : . :::.:. ::..
CCDS41 SIELQATDGHDRPLTNCSIINSGKIDVKTPFVVEIADW
180 190 200 210
>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 (165 aa)
initn: 715 init1: 642 opt: 699 Z-score: 948.9 bits: 182.3 E(32554): 1.6e-46
Smith-Waterman score: 699; 64.5% identity (79.5% similar) in 166 aa overlap (42-206:2-165)
20 30 40 50 60 70
pF1KB6 LLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPK
:. :.::. . : .::: : ::. :::
CCDS54 MVNPTVFFDIAVDGEPLGRVSFELFADKVPK
10 20 30
80 90 100 110 120 130
pF1KB6 TVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLK
:..:: ::.:::::::::.: :::.: :: ::::::: .::::::::::.: :::: ::
CCDS54 TAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 HYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRD
: ::: .:::::: .:::::::: :.:: :::::::::::: :::..:. .: . ::.
CCDS54 HTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME--RFGSRN
100 110 120 130 140
200 210
pF1KB6 -KPLKDVIIADCGKIEVEKPFAIAKE
: : . :::::..:
CCDS54 GKTSKKITIADCGQLE
150 160
>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 (207 aa)
initn: 665 init1: 646 opt: 684 Z-score: 927.2 bits: 178.6 E(32554): 2.5e-45
Smith-Waterman score: 684; 57.0% identity (76.3% similar) in 186 aa overlap (25-205:22-206)
10 20 30 40 50
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVK-----VYFDLRIGDE
: ::. : .. . :. . . ::.:. . .
CCDS73 MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGK
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 DVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGG
.:::.. : . .::::..:: :: :::::::::.: ::::: .:: :.:::: .::::
CCDS73 PLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 KSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEG
::::: ::::::: ::: ::: .:::::: .:::::::: :.:: ::::::::::.: ::
CCDS73 KSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEG
120 130 140 150 160 170
180 190 200 210
pF1KB6 MEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
:.::.:.:: . : . : ..:.:::..
CCDS73 MDVVKKIESFGSKS-GRTSKKIVITDCGQLS
180 190 200
>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1 (301 aa)
initn: 663 init1: 595 opt: 653 Z-score: 882.9 bits: 170.9 E(32554): 7.4e-43
Smith-Waterman score: 653; 55.9% identity (78.0% similar) in 177 aa overlap (29-204:129-299)
10 20 30 40 50
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVG
: : . ...: .::.:..::.. .:
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNP----QVYMDIKIGNKPAG
100 110 120 130 140 150
60 70 80 90 100 110
pF1KB6 RVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI
:. . : . .:: :..:: : : :::::.:.:.:::.: .:: :::::: .:::::::
CCDS44 RIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI
160 170 180 190 200 210
120 130 140 150 160 170
pF1KB6 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEV
::..: :::: ::: ::: .::::.: .:::::::.: :: ::::::::::.: ::..:
CCDS44 YGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDV
220 230 240 250 260 270
180 190 200 210
pF1KB6 VRKVESTKTDSRD-KPLKDVIIADCGKIEVEKPFAIAKE
.:..:. :.: :: . :::::::.
CCDS44 LRQIEAQ--GSKDGKPKQKVIIADCGEYV
280 290 300
>>CCDS3801.1 PPID gene_id:5481|Hs108|chr4 (370 aa)
initn: 476 init1: 434 opt: 633 Z-score: 854.6 bits: 166.0 E(32554): 2.8e-41
Smith-Waterman score: 633; 52.9% identity (75.9% similar) in 187 aa overlap (28-206:4-185)
10 20 30 40 50 60
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRV
:.:.: . ..:.: .::. :: : :::.
CCDS38 MSHPSPQAKPSNPSNPRV----FFDVDIGGERVGRI
10 20 30
70 80 90 100 110
pF1KB6 IFGLFGKTVPKTVDNFVALATGEKGFG--------YKNSKFHRVIKDFMIQGGDFTRGDG
.. ::. ::::..:: :: :::::.: .:. :::.:: ::::::::. .:
CCDS38 VLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB6 TGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKV
:::.:::::.: ::::. :: : .::::::..::::::::::: : :::::::::.:
CCDS38 TGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQV
100 110 120 130 140 150
180 190 200 210
pF1KB6 LEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
..:. :.: .:.... . .:: : .::.::...
CCDS38 IKGIGVARILENVEVKG-EKPAKLCVIAECGELKEGDDGGIFPKDGSGDSHPDFPEDADI
160 170 180 190 200 210
CCDS38 DLKDVDKILLITEDLKNIGNTFFKSQNWEMAIKKYAEVLRYVDSSKAVIETADRAKLQPI
220 230 240 250 260 270
>>CCDS469.1 PPIH gene_id:10465|Hs108|chr1 (177 aa)
initn: 626 init1: 514 opt: 617 Z-score: 837.7 bits: 161.8 E(32554): 2.4e-40
Smith-Waterman score: 617; 57.0% identity (77.0% similar) in 165 aa overlap (46-205:13-177)
20 30 40 50 60 70
pF1KB6 ALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDN
:.::. :: ..:::. . ::. .::::..:
CCDS46 MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAEN
10 20 30 40
80 90 100 110 120 130
pF1KB6 FVALATGE---KG--FGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKL
: . ::: : .:::.: :::::::::::::::. ::::: ::: : ::::::
CCDS46 FRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKL
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB6 KHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSR
.: .:: .::::.: .::: ::::: : :::::::::::...:. :.::.:.. :
CCDS46 RHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN
110 120 130 140 150 160
200 210
pF1KB6 DKPLKDVIIADCGKIEVEKPFAIAKE
.:: :.:..::..
CCDS46 NKPKLPVVISQCGEM
170
>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 (164 aa)
initn: 612 init1: 561 opt: 601 Z-score: 816.6 bits: 157.8 E(32554): 3.6e-39
Smith-Waterman score: 601; 57.2% identity (76.1% similar) in 159 aa overlap (46-204:6-163)
20 30 40 50 60 70
pF1KB6 ALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDN
:.::. . . .::. . ::. .:::..:
CCDS72 MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAEN
10 20 30
80 90 100 110 120 130
pF1KB6 FVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGP
: ::.:::::: ::.: :::.: :: ::::::: .::: ::::::.: :::. :: :
CCDS72 FRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 GWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLK
: .:::::: .:::::::: :.:: :::::::.:::: : ...:. .: . .: :
CCDS72 GILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRN-SKTSK
100 110 120 130 140 150
200 210
pF1KB6 DVIIADCGKIEVEKPFAIAKE
. :::::.
CCDS72 KITIADCGQF
160
>>CCDS442.1 PPIE gene_id:10450|Hs108|chr1 (296 aa)
initn: 612 init1: 594 opt: 600 Z-score: 811.4 bits: 157.7 E(32554): 7.1e-39
Smith-Waterman score: 600; 56.8% identity (79.4% similar) in 155 aa overlap (29-183:129-279)
10 20 30 40 50
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVG
: : . ...:.: :.:..::.. .:
CCDS44 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQV----YMDIKIGNKPAG
100 110 120 130 140 150
60 70 80 90 100 110
pF1KB6 RVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI
:. . : . .:: :..:: : : :::::.:.:.:::.: .:: :::::: .:::::::
CCDS44 RIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI
160 170 180 190 200 210
120 130 140 150 160 170
pF1KB6 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEV
::..: :::: ::: ::: .::::.: .:::::::.: :: ::::::::::.: ::..:
CCDS44 YGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDV
220 230 240 250 260 270
180 190 200 210
pF1KB6 VRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
.:..:
CCDS44 LRQIEKQEESAITSQPRSWKLT
280 290
>>CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 (314 aa)
initn: 612 init1: 594 opt: 600 Z-score: 811.1 bits: 157.7 E(32554): 7.4e-39
Smith-Waterman score: 600; 56.8% identity (79.4% similar) in 155 aa overlap (29-183:129-279)
10 20 30 40 50
pF1KB6 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVG
: : . ...:.: :.:..::.. .:
CCDS53 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQV----YMDIKIGNKPAG
100 110 120 130 140 150
60 70 80 90 100 110
pF1KB6 RVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI
:. . : . .:: :..:: : : :::::.:.:.:::.: .:: :::::: .:::::::
CCDS53 RIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI
160 170 180 190 200 210
120 130 140 150 160 170
pF1KB6 YGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEV
::..: :::: ::: ::: .::::.: .:::::::.: :: ::::::::::.: ::..:
CCDS53 YGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDV
220 230 240 250 260 270
180 190 200 210
pF1KB6 VRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE
.:..:
CCDS53 LRQIEVAPDTKASKARGSRKNKDGQERNWGKSQKVESHTI
280 290 300 310
216 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:00:41 2016 done: Fri Nov 4 11:00:41 2016
Total Scan time: 1.780 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]