Result of FASTA (omim) for pF1KB6983
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6983, 218 aa
  1>>>pF1KB6983 218 - 218 aa - 218 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0450+/-0.000258; mu= 18.7892+/- 0.017
 mean_var=104.6277+/-20.618, 0's: 0 Z-trim(124.3): 413  B-trim: 779 in 1/57
 Lambda= 0.125387
 statistics sampled from 45172 (45649) to 45172 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.535), width:  16
 Scan time:  5.380

The best scores are:                                      opt bits E(85289)
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218) 1468 274.5 9.4e-74
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204)  880 168.1 9.4e-42
XP_016872852 (OMIM: 600098) PREDICTED: ras-related ( 182)  751 144.7 9.2e-35
NP_001170785 (OMIM: 600098) ras-related protein R- ( 169)  743 143.2 2.4e-34
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189)  642 125.0 8.2e-29
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189)  642 125.0 8.2e-29
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208)  634 123.6 2.4e-28
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208)  634 123.6 2.4e-28
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208)  634 123.6 2.4e-28
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208)  634 123.6 2.4e-28
XP_005247285 (OMIM: 608435) PREDICTED: ras-related ( 208)  634 123.6 2.4e-28
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188)  631 123.0 3.2e-28
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188)  631 123.0 3.2e-28
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189)  629 122.7 4.2e-28
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189)  609 119.0 5.1e-27
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189)  609 119.0 5.1e-27
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227)  609 119.1 5.7e-27
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219)  577 113.3 3.1e-25
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236)  577 113.4 3.3e-25
NP_002921 (OMIM: 609592) GTP-binding protein Rit2  ( 217)  563 110.8 1.8e-24
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206)  562 110.6   2e-24
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206)  562 110.6   2e-24
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206)  562 110.6   2e-24
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206)  562 110.6   2e-24
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206)  562 110.6   2e-24
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228)  562 110.6 2.1e-24
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228)  562 110.6 2.1e-24
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229)  562 110.6 2.1e-24
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184)  560 110.2 2.3e-24
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184)  560 110.2 2.3e-24
NP_789765 (OMIM: 109800,137550,162900,163200,18847 ( 170)  555 109.2 4.2e-24
XP_005247286 (OMIM: 608435) PREDICTED: ras-related ( 170)  551 108.5 6.9e-24
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184)  551 108.5 7.2e-24
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184)  551 108.5 7.2e-24
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184)  551 108.5 7.2e-24
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184)  551 108.5 7.2e-24
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184)  551 108.5 7.2e-24
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184)  551 108.5 7.2e-24
XP_006715825 (OMIM: 179550) PREDICTED: ras-related ( 206)  541 106.8 2.7e-23
XP_011513768 (OMIM: 179550) PREDICTED: ras-related ( 206)  541 106.8 2.7e-23
NP_005393 (OMIM: 179550) ras-related protein Ral-A ( 206)  541 106.8 2.7e-23
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183)  526 104.0 1.7e-22
NP_001096139 (OMIM: 600098) ras-related protein R- ( 127)  518 102.4 3.6e-22
NP_001170786 (OMIM: 600098) ras-related protein R- ( 127)  518 102.4 3.6e-22
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183)  511 101.3 1.1e-21
XP_016857449 (OMIM: 179520) PREDICTED: ras-related ( 195)  511 101.3 1.1e-21
XP_016857450 (OMIM: 179520) PREDICTED: ras-related ( 195)  511 101.3 1.1e-21
NP_001243749 (OMIM: 609591,615355) GTP-binding pro ( 183)  500 99.3 4.3e-21
XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding ( 232)  461 92.4 6.7e-19
NP_001259006 (OMIM: 609592) GTP-binding protein Ri ( 153)  458 91.6 7.5e-19


>>NP_006261 (OMIM: 165090) ras-related protein R-Ras [Ho  (218 aa)
 initn: 1468 init1: 1468 opt: 1468  Z-score: 1445.1  bits: 274.5 E(85289): 9.4e-74
Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVD
              130       140       150       160       170       180

              190       200       210        
pF1KB6 EAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL
       ::::::::::::::::::::::::::::::::::::::
NP_006 EAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL
              190       200       210        

>>NP_036382 (OMIM: 600098) ras-related protein R-Ras2 is  (204 aa)
 initn: 864 init1: 838 opt: 880  Z-score: 870.6  bits: 168.1 E(85289): 9.4e-42
Smith-Waterman score: 880; 66.0% identity (85.5% similar) in 200 aa overlap (20-218:5-204)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                          :  :   .: ..::::::::::::::::::::::::.::::
NP_036                MAAAGWRDGSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDP
                              10        20        30        40     

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::::: : .:   :::::::::::::::::::::::.:.::::::...:: ::.:. 
NP_036 TIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIY
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVD
       :.  :::::::::.::..:.::::::. :::: . :.. .. . .:.:.:::::.:.:::
NP_036 KFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVD
         110       120       130       140       150       160     

              190       200        210        
pF1KB6 EAFEQLVRAVRKYQEQELPPSP-PSAPRKKGGGCPCVLL
       .::..:::..::.:::: :::: :.  .:   :: ::..
NP_036 QAFHELVRVIRKFQEQECPPSPEPTRKEKDKKGCHCVIF
         170       180       190       200    

>>XP_016872852 (OMIM: 600098) PREDICTED: ras-related pro  (182 aa)
 initn: 737 init1: 711 opt: 751  Z-score: 745.0  bits: 144.7 E(85289): 9.2e-35
Smith-Waterman score: 751; 62.4% identity (84.0% similar) in 181 aa overlap (39-218:5-182)

       10        20        30        40        50        60        
pF1KB6 TGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTK
                                     : :.. :    :.::::.::::::::::::
XP_016                           MTKLGSGEARL---HIRSYFVTDYDPTIEDSYTK
                                         10           20        30 

       70        80        90       100       110       120        
pF1KB6 ICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILR
        : .:   :::::::::::::::::::::::.:.::::::...:: ::.:. :.  ::::
XP_016 QCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILR
              40        50        60        70        80        90 

      130       140       150       160       170       180        
pF1KB6 VKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVR
       :::::.::..:.::::::. :::: . :.. .. . .:.:.:::::.:.:::.::..:::
XP_016 VKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVR
             100       110       120       130       140       150 

      190       200        210        
pF1KB6 AVRKYQEQELPPSP-PSAPRKKGGGCPCVLL
       ..::.:::: :::: :.  .:   :: ::..
XP_016 VIRKFQEQECPPSPEPTRKEKDKKGCHCVIF
             160       170       180  

>>NP_001170785 (OMIM: 600098) ras-related protein R-Ras2  (169 aa)
 initn: 731 init1: 705 opt: 743  Z-score: 737.6  bits: 143.2 E(85289): 2.4e-34
Smith-Waterman score: 743; 64.9% identity (86.3% similar) in 168 aa overlap (52-218:2-169)

              30        40        50        60        70        80 
pF1KB6 GDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDI
                                     ::::.:::::::::::: : .:   :::::
NP_001                              MSYFVTDYDPTIEDSYTKQCVIDDRAARLDI
                                            10        20        30 

              90       100       110       120       130       140 
pF1KB6 LDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVG
       ::::::::::::::::::.:.::::::...:: ::.:. :.  :::::::::.::..:.:
NP_001 LDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIG
              40        50        60        70        80        90 

             150       160       170       180       190       200 
pF1KB6 NKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELPPS
       :::::. :::: . :.. .. . .:.:.:::::.:.:::.::..:::..::.:::: :::
NP_001 NKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQECPPS
             100       110       120       130       140       150 

              210        
pF1KB6 P-PSAPRKKGGGCPCVLL
       : :.  .:   :: ::..
NP_001 PEPTRKEKDKKGCHCVIF
             160         

>>NP_001123914 (OMIM: 109800,137550,162900,163200,188470  (189 aa)
 initn: 594 init1: 512 opt: 642  Z-score: 638.3  bits: 125.0 E(85289): 8.2e-29
Smith-Waterman score: 642; 55.3% identity (76.6% similar) in 188 aa overlap (30-217:4-188)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                                    .::::::.:::::::::::.::..::..:::
NP_001                           MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDP
                                         10        20        30    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .::    :::::::::::..:::.::::.:.::: :::::. .::... 
NP_001 TIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIH
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVD
       .   :: :::: :: :.:::::: :: . : :   .:. .. :. . :.:.::: : .:.
NP_001 QYREQIKRVKDSDDVPMVLVGNKCDL-AARTVESRQAQDLARSYGIPYIETSAKTRQGVE
          100       110       120        130       140       150   

              190       200       210        
pF1KB6 EAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL
       .::  ::: .:... ..: :   :.:     .: ::: 
NP_001 DAFYTLVREIRQHKLRKLNPPDESGP--GCMSCKCVLS
           160       170         180         

>>NP_005334 (OMIM: 109800,137550,162900,163200,188470,19  (189 aa)
 initn: 594 init1: 512 opt: 642  Z-score: 638.3  bits: 125.0 E(85289): 8.2e-29
Smith-Waterman score: 642; 55.3% identity (76.6% similar) in 188 aa overlap (30-217:4-188)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                                    .::::::.:::::::::::.::..::..:::
NP_005                           MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDP
                                         10        20        30    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .::    :::::::::::..:::.::::.:.::: :::::. .::... 
NP_005 TIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIH
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVD
       .   :: :::: :: :.:::::: :: . : :   .:. .. :. . :.:.::: : .:.
NP_005 QYREQIKRVKDSDDVPMVLVGNKCDL-AARTVESRQAQDLARSYGIPYIETSAKTRQGVE
          100       110       120        130       140       150   

              190       200       210        
pF1KB6 EAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL
       .::  ::: .:... ..: :   :.:     .: ::: 
NP_005 DAFYTLVREIRQHKLRKLNPPDESGP--GCMSCKCVLS
           160       170         180         

>>NP_036351 (OMIM: 608435) ras-related protein M-Ras iso  (208 aa)
 initn: 626 init1: 571 opt: 634  Z-score: 630.0  bits: 123.6 E(85289): 2.4e-28
Smith-Waterman score: 634; 54.0% identity (79.4% similar) in 189 aa overlap (21-208:7-189)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                           :.:  :  :.:::::: ::::::::::::.:. :: ::::
NP_036               MATSAVPSDNLP--TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
                             10          20        30        40    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .:.  : ::.:::::::::.::::::::.: :::.:....:. ::..: 
NP_036 TIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVD
           50        60        70        80        90       100    

              130       140       150       160       170          
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLR-LNV
       ..   :::::::..::..::.::.::   :.. : ... ....:.. :.:.:::   :::
NP_036 RFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNV
          110       120       130       140       150       160    

     180       190       200       210                 
pF1KB6 DEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL         
       :.::..:::..:    :..: .  .  .:                   
NP_036 DKAFHDLVRVIR----QQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
          170           180       190       200        

>>NP_001239019 (OMIM: 608435) ras-related protein M-Ras   (208 aa)
 initn: 626 init1: 571 opt: 634  Z-score: 630.0  bits: 123.6 E(85289): 2.4e-28
Smith-Waterman score: 634; 54.0% identity (79.4% similar) in 189 aa overlap (21-208:7-189)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                           :.:  :  :.:::::: ::::::::::::.:. :: ::::
NP_001               MATSAVPSDNLP--TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
                             10          20        30        40    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .:.  : ::.:::::::::.::::::::.: :::.:....:. ::..: 
NP_001 TIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVD
           50        60        70        80        90       100    

              130       140       150       160       170          
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLR-LNV
       ..   :::::::..::..::.::.::   :.. : ... ....:.. :.:.:::   :::
NP_001 RFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNV
          110       120       130       140       150       160    

     180       190       200       210                 
pF1KB6 DEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL         
       :.::..:::..:    :..: .  .  .:                   
NP_001 DKAFHDLVRVIR----QQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
          170           180       190       200        

>>NP_001078518 (OMIM: 608435) ras-related protein M-Ras   (208 aa)
 initn: 626 init1: 571 opt: 634  Z-score: 630.0  bits: 123.6 E(85289): 2.4e-28
Smith-Waterman score: 634; 54.0% identity (79.4% similar) in 189 aa overlap (21-208:7-189)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                           :.:  :  :.:::::: ::::::::::::.:. :: ::::
NP_001               MATSAVPSDNLP--TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
                             10          20        30        40    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .:.  : ::.:::::::::.::::::::.: :::.:....:. ::..: 
NP_001 TIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVD
           50        60        70        80        90       100    

              130       140       150       160       170          
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLR-LNV
       ..   :::::::..::..::.::.::   :.. : ... ....:.. :.:.:::   :::
NP_001 RFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNV
          110       120       130       140       150       160    

     180       190       200       210                 
pF1KB6 DEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL         
       :.::..:::..:    :..: .  .  .:                   
NP_001 DKAFHDLVRVIR----QQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
          170           180       190       200        

>>XP_016861376 (OMIM: 608435) PREDICTED: ras-related pro  (208 aa)
 initn: 626 init1: 571 opt: 634  Z-score: 630.0  bits: 123.6 E(85289): 2.4e-28
Smith-Waterman score: 634; 54.0% identity (79.4% similar) in 189 aa overlap (21-208:7-189)

               10        20        30        40        50        60
pF1KB6 MSSGAASGTGRGRPRGGGPGPGDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDP
                           :.:  :  :.:::::: ::::::::::::.:. :: ::::
XP_016               MATSAVPSDNLP--TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDP
                             10          20        30        40    

               70        80        90       100       110       120
pF1KB6 TIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG
       :::::: :   .:.  : ::.:::::::::.::::::::.: :::.:....:. ::..: 
XP_016 TIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVD
           50        60        70        80        90       100    

              130       140       150       160       170          
pF1KB6 KLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLR-LNV
       ..   :::::::..::..::.::.::   :.. : ... ....:.. :.:.:::   :::
XP_016 RFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNV
          110       120       130       140       150       160    

     180       190       200       210                 
pF1KB6 DEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL         
       :.::..:::..:    :..: .  .  .:                   
XP_016 DKAFHDLVRVIR----QQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL
          170           180       190       200        




218 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 10:34:17 2016 done: Fri Nov  4 10:34:18 2016
 Total Scan time:  5.380 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com