Result of FASTA (omim) for
pF1KB6986
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6986, 248 aa
1>>>pF1KB6986 248 - 248 aa - 248 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6489+/-0.000333; mu= 13.4398+/- 0.021
mean_var=71.2265+/-13.808, 0's: 0 Z-trim(113.5): 27 B-trim: 0 in 0/54
Lambda= 0.151968
statistics sampled from 22828 (22854) to 22828 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.268), width: 16
Scan time: 6.430
The best scores are: opt bits E(85289)
NP_002783 (OMIM: 606607) proteasome subunit alpha ( 248) 1579 355.1 6.9e-98
NP_002778 (OMIM: 176842) proteasome subunit alpha ( 234) 548 129.0 7.3e-30
NP_001096137 (OMIM: 176846) proteasome subunit alp ( 261) 528 124.6 1.7e-28
NP_002780 (OMIM: 176846) proteasome subunit alpha ( 261) 528 124.6 1.7e-28
NP_001317605 (OMIM: 176846) proteasome subunit alp ( 261) 528 124.6 1.7e-28
NP_002781 (OMIM: 176844) proteasome subunit alpha ( 241) 497 117.8 1.7e-26
NP_002777 (OMIM: 602854) proteasome subunit alpha ( 263) 466 111.0 2.1e-24
NP_683877 (OMIM: 602854) proteasome subunit alpha ( 269) 466 111.1 2.1e-24
NP_002782 (OMIM: 602855,608446) proteasome subunit ( 246) 439 105.1 1.2e-22
NP_001317602 (OMIM: 176846) proteasome subunit alp ( 174) 435 104.2 1.6e-22
NP_002779 (OMIM: 176843) proteasome subunit alpha ( 255) 420 101.0 2.2e-21
NP_687033 (OMIM: 176843) proteasome subunit alpha ( 248) 399 96.3 5.2e-20
NP_001317604 (OMIM: 176846) proteasome subunit alp ( 230) 393 95.0 1.2e-19
NP_001096138 (OMIM: 176846) proteasome subunit alp ( 190) 358 87.3 2.1e-17
NP_001269163 (OMIM: 602855,608446) proteasome subu ( 227) 354 86.5 4.5e-17
NP_001186703 (OMIM: 176844) proteasome subunit alp ( 183) 312 77.2 2.2e-14
NP_001186701 (OMIM: 176844) proteasome subunit alp ( 183) 312 77.2 2.2e-14
NP_001186702 (OMIM: 176844) proteasome subunit alp ( 183) 312 77.2 2.2e-14
NP_001137409 (OMIM: 602854) proteasome subunit alp ( 130) 263 66.4 2.8e-11
NP_001269162 (OMIM: 602855,608446) proteasome subu ( 167) 249 63.4 2.9e-10
XP_016876957 (OMIM: 602855,608446) PREDICTED: prot ( 167) 249 63.4 2.9e-10
NP_001269161 (OMIM: 602855,608446) proteasome subu ( 167) 249 63.4 2.9e-10
NP_002792 (OMIM: 176847) proteasome subunit beta t ( 273) 187 49.9 5.6e-06
NP_002790 (OMIM: 604030) proteasome subunit beta t ( 277) 159 43.7 0.0004
NP_002788 (OMIM: 600306) proteasome subunit beta t ( 263) 157 43.3 0.00051
>>NP_002783 (OMIM: 606607) proteasome subunit alpha type (248 aa)
initn: 1579 init1: 1579 opt: 1579 Z-score: 1878.4 bits: 355.1 E(85289): 6.9e-98
Smith-Waterman score: 1579; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248)
10 20 30 40 50 60
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENE
190 200 210 220 230 240
pF1KB6 KKKQKKAS
::::::::
NP_002 KKKQKKAS
>>NP_002778 (OMIM: 176842) proteasome subunit alpha type (234 aa)
initn: 491 init1: 352 opt: 548 Z-score: 657.2 bits: 129.0 E(85289): 7.3e-30
Smith-Waterman score: 548; 38.8% identity (72.0% similar) in 232 aa overlap (3-232:6-233)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDER
:. ..:.:::.:.: :.::: :: :. .::... . :::..:::. . : :::
NP_002 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:.:. . .. ....:. : :....::: :.. :. ..:. . ... .::. :.
NP_002 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
::::.: ::::.: :: :.. .: : :.:.::::.: ::::.:.:.. . . :::: :
NP_002 YTQSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRY-
130 140 150 160 170
180 190 200 210 220 230
pF1KB6 DEAIETDDLTIKLVIKALLEVV--QSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKE
.: .: .: .:. .: .: : : :::... . ... :.: :.. :.: :
NP_002 NEDLELED-AIHTAILTLKESFEGQMTEDNIEVGICN-EAGFRRLTPTEVKDYLAAIA
180 190 200 210 220 230
240
pF1KB6 KEENEKKKQKKAS
>>NP_001096137 (OMIM: 176846) proteasome subunit alpha t (261 aa)
initn: 544 init1: 295 opt: 528 Z-score: 632.7 bits: 124.6 E(85289): 1.7e-28
Smith-Waterman score: 528; 33.5% identity (71.3% similar) in 251 aa overlap (3-246:5-254)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERT
:: :.:::.:.:.:::::.::. ...: .:. . : :.:..:.... :: ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 V-RKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:: :.... . ::.:.:: .. :. :. : . : ..:. : .. . ..::
NP_001 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
::: .:.::::.: : .:.: .:::.::::.: .:::. :: .. .. .:...:
NP_001 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 DEAIETDDLTIKLVIKAL---LEVVQSGGKNIELAVMRRDQS---LKILNPEEIEKYVAE
. . . .. :.::.: ..: . .....:.:.. :... ...:. .:.:. . .
NP_001 EGEMTLKS-ALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
190 200 210 220 230
240
pF1KB6 IEKEKEENEKKKQKKAS
:.:. . :..:..:
NP_001 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_002780 (OMIM: 176846) proteasome subunit alpha type (261 aa)
initn: 544 init1: 295 opt: 528 Z-score: 632.7 bits: 124.6 E(85289): 1.7e-28
Smith-Waterman score: 528; 33.5% identity (71.3% similar) in 251 aa overlap (3-246:5-254)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERT
:: :.:::.:.:.:::::.::. ...: .:. . : :.:..:.... :: ::
NP_002 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 V-RKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:: :.... . ::.:.:: .. :. :. : . : ..:. : .. . ..::
NP_002 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
::: .:.::::.: : .:.: .:::.::::.: .:::. :: .. .. .:...:
NP_002 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 DEAIETDDLTIKLVIKAL---LEVVQSGGKNIELAVMRRDQS---LKILNPEEIEKYVAE
. . . .. :.::.: ..: . .....:.:.. :... ...:. .:.:. . .
NP_002 EGEMTLKS-ALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
190 200 210 220 230
240
pF1KB6 IEKEKEENEKKKQKKAS
:.:. . :..:..:
NP_002 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_001317605 (OMIM: 176846) proteasome subunit alpha t (261 aa)
initn: 544 init1: 295 opt: 528 Z-score: 632.7 bits: 124.6 E(85289): 1.7e-28
Smith-Waterman score: 528; 33.5% identity (71.3% similar) in 251 aa overlap (3-246:5-254)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERT
:: :.:::.:.:.:::::.::. ...: .:. . : :.:..:.... :: ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 V-RKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:: :.... . ::.:.:: .. :. :. : . : ..:. : .. . ..::
NP_001 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
::: .:.::::.: : .:.: .:::.::::.: .:::. :: .. .. .:...:
NP_001 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 DEAIETDDLTIKLVIKAL---LEVVQSGGKNIELAVMRRDQS---LKILNPEEIEKYVAE
. . . .. :.::.: ..: . .....:.:.. :... ...:. .:.:. . .
NP_001 EGEMTLKS-ALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKK
190 200 210 220 230
240
pF1KB6 IEKEKEENEKKKQKKAS
:.:. . :..:..:
NP_001 HEEEEAKAEREKKEKEQKEKDK
240 250 260
>>NP_002781 (OMIM: 176844) proteasome subunit alpha type (241 aa)
initn: 505 init1: 337 opt: 497 Z-score: 596.5 bits: 117.8 E(85289): 1.7e-26
Smith-Waterman score: 506; 37.9% identity (71.7% similar) in 240 aa overlap (3-232:8-241)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQD
:::....:::.:.::::::: ::.: ::::.:.. . : :.:::. .. :..
NP_002 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLK
...:: .: .. :..:: :::. .:..:::: :.: .: .. .::: .:. ...:
NP_002 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA
70 80 90 100 110 120
120 130 140 150 160
pF1KB6 QRYTQSNG-----RRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIG---RGAKS
.. . .. ::::.. :. : : : :.:.. :::::. : ::: .::.:
NP_002 LQFGEEDADPGAMSRPFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQS
130 140 150 160 170
170 180 190 200 210 220
pF1KB6 -VREFLEKNYT-DEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEI
..: .:..: :::... . .: :.. :... :::::... :...... ::.
NP_002 SLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNAT-----NIELATVQPGQNFHMFTKEEL
180 190 200 210 220 230
230 240
pF1KB6 EKYVAEIEKEKEENEKKKQKKAS
:. . .:
NP_002 EEVIKDI
240
>>NP_002777 (OMIM: 602854) proteasome subunit alpha type (263 aa)
initn: 425 init1: 206 opt: 466 Z-score: 559.2 bits: 111.0 E(85289): 2.1e-24
Smith-Waterman score: 466; 32.8% identity (68.8% similar) in 247 aa overlap (3-244:6-248)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDER
:: .::.::.:.. :.:::.::::.::..::.... .:: . :.. ..: ..
NP_002 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:: .:... ...::::::::.. : : :: . :.. . :. : .. :.: :
NP_002 --KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQI
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
:: ::::.:.. ::.:.: : :...:: ::..: .: .:: ..:.: .::....
NP_002 PTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 DEAIETD-DLTIKLVIKALLEVVQS----GGKNIELAVMRRDQSLKILNPEEIEKYVAEI
: .: . . .: ..:: :.. . ::. .... .: . : . ... .. .
NP_002 -EFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGL
180 190 200 210 220 230
240
pF1KB6 EKEKEENEKKKQKKAS
:.. ... . :
NP_002 EERPQRKAQPAQPADEPAEKADEPMEH
240 250 260
>>NP_683877 (OMIM: 602854) proteasome subunit alpha type (269 aa)
initn: 425 init1: 206 opt: 466 Z-score: 559.1 bits: 111.1 E(85289): 2.1e-24
Smith-Waterman score: 466; 32.8% identity (68.8% similar) in 247 aa overlap (3-244:12-254)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVA
:: .::.::.:.. :.:::.::::.::..::.... .:: . :.. .
NP_683 MQLSKVKFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYI
.: .. .:: .:... ...::::::::.. : : :: . :.. . :. : .. :
NP_683 ELAAHQ--KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLI
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 ASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREF
.: : :: ::::.:.. ::.:.: : :...:: ::..: .: .:: ..:.: .
NP_683 GSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTY
120 130 140 150 160 170
180 190 200 210 220
pF1KB6 LEKNYTDEAIETD-DLTIKLVIKALLEVVQS----GGKNIELAVMRRDQSLKILNPEEIE
::.... : .: . . .: ..:: :.. . ::. .... .: . : . ...
NP_683 LERHMS-EFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVS
180 190 200 210 220 230
230 240
pF1KB6 KYVAEIEKEKEENEKKKQKKAS
.. .:.. ... . :
NP_683 PFLEGLEERPQRKAQPAQPADEPAEKADEPMEH
240 250 260
>>NP_002782 (OMIM: 602855,608446) proteasome subunit alp (246 aa)
initn: 410 init1: 308 opt: 439 Z-score: 527.7 bits: 105.1 E(85289): 1.2e-22
Smith-Waterman score: 439; 34.5% identity (66.0% similar) in 238 aa overlap (3-235:9-246)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGRDIVVLGVEKKSVAKL
.:: ::.:::.:.:.::::: .:...:. :.:.:::.: .:. ..:: ::
NP_002 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIAS
: :: .. . .:. ...:.:::.: ..::: : . . . :... . ::.
NP_002 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLE
..: :::. ::.: ...:.: . :..:. ::.: : ..::.: : :::
NP_002 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
130 140 150 160 170 180
180 190 200 210 220
pF1KB6 KNYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMR-RDQSLKILNPEEIEKY-V
:. . : . :.. .: : :.. : .::..:. .. ...::. ::. . :
NP_002 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
190 200 210 220 230 240
230 240
pF1KB6 AEIEKEKEENEKKKQKKAS
: :..
NP_002 ALAERD
>>NP_001317602 (OMIM: 176846) proteasome subunit alpha t (174 aa)
initn: 439 init1: 280 opt: 435 Z-score: 525.2 bits: 104.2 E(85289): 1.6e-22
Smith-Waterman score: 435; 41.0% identity (72.0% similar) in 161 aa overlap (3-162:5-165)
10 20 30 40 50
pF1KB6 MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERT
:: :.:::.:.:.:::::.::. ...: .:. . : :.:..:.... :: ::
NP_001 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 V-RKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQR
.:: :.... . ::.:.:: .. :. :. : . : ..:. : .. . ..::
NP_001 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 YTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT
::: .:.::::.: : .:.: .:::.::::.: .:::. ::
NP_001 YTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAWKLQH
130 140 150 160 170
180 190 200 210 220 230
pF1KB6 DEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKE
248 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:24:39 2016 done: Fri Nov 4 10:24:40 2016
Total Scan time: 6.430 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]