FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6988, 248 aa 1>>>pF1KB6988 248 - 248 aa - 248 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7902+/-0.000353; mu= 6.9973+/- 0.022 mean_var=230.6587+/-45.436, 0's: 0 Z-trim(122.7): 407 B-trim: 1453 in 1/55 Lambda= 0.084448 statistics sampled from 40856 (41374) to 40856 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.485), width: 16 Scan time: 8.020 The best scores are: opt bits E(85289) XP_011538118 (OMIM: 154545,614372) PREDICTED: mann ( 248) 1697 218.4 9.1e-57 NP_000233 (OMIM: 154545,614372) mannose-binding pr ( 248) 1697 218.4 9.1e-57 XP_006717924 (OMIM: 154545,614372) PREDICTED: mann ( 248) 1697 218.4 9.1e-57 XP_011538390 (OMIM: 178635) PREDICTED: pulmonary s ( 336) 562 80.3 4.7e-15 NP_003010 (OMIM: 178635) pulmonary surfactant-asso ( 375) 562 80.4 5.1e-15 XP_011538389 (OMIM: 178635) PREDICTED: pulmonary s ( 375) 562 80.4 5.1e-15 XP_005270119 (OMIM: 178500,178630) PREDICTED: pulm ( 248) 518 74.8 1.6e-13 NP_001158116 (OMIM: 178500,178630) pulmonary surfa ( 248) 518 74.8 1.6e-13 NP_005402 (OMIM: 178500,178630) pulmonary surfacta ( 248) 518 74.8 1.6e-13 NP_001158119 (OMIM: 178500,178630) pulmonary surfa ( 248) 518 74.8 1.6e-13 XP_006718016 (OMIM: 178500,178630) PREDICTED: pulm ( 263) 518 74.8 1.6e-13 NP_001087239 (OMIM: 178500,178630) pulmonary surfa ( 263) 518 74.8 1.6e-13 NP_001092138 (OMIM: 178500,178642) pulmonary surfa ( 248) 513 74.2 2.4e-13 XP_011538427 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 513 74.2 2.4e-13 XP_011538426 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 513 74.2 2.4e-13 XP_016872097 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 513 74.2 2.4e-13 XP_005270189 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 513 74.2 2.4e-13 NP_001307742 (OMIM: 178500,178642) pulmonary surfa ( 248) 513 74.2 2.4e-13 NP_001307743 (OMIM: 178500,178642) pulmonary surfa ( 258) 513 74.2 2.5e-13 XP_005270185 (OMIM: 178500,178642) PREDICTED: pulm ( 265) 513 74.2 2.5e-13 NP_001242912 (OMIM: 265050,612502) collectin-11 is ( 247) 389 59.1 8.5e-09 XP_006711960 (OMIM: 265050,612502) PREDICTED: coll ( 261) 389 59.1 8.8e-09 NP_001242915 (OMIM: 265050,612502) collectin-11 is ( 245) 385 58.6 1.2e-08 NP_076932 (OMIM: 265050,612502) collectin-11 isofo ( 271) 385 58.6 1.3e-08 NP_001242914 (OMIM: 265050,612502) collectin-11 is ( 285) 385 58.7 1.3e-08 NP_001158118 (OMIM: 178500,178630) pulmonary surfa ( 199) 381 58.0 1.5e-08 NP_001158117 (OMIM: 178500,178630) pulmonary surfa ( 214) 381 58.0 1.5e-08 NP_001242917 (OMIM: 265050,612502) collectin-11 is ( 221) 373 57.1 3.1e-08 NP_001242911 (OMIM: 265050,612502) collectin-11 is ( 247) 373 57.1 3.3e-08 XP_005263910 (OMIM: 265050,612502) PREDICTED: coll ( 261) 373 57.2 3.4e-08 NP_006429 (OMIM: 607620) collectin-10 isoform 1 pr ( 277) 367 56.5 5.9e-08 NP_954705 (OMIM: 265050,612502) collectin-11 isofo ( 268) 366 56.3 6.3e-08 NP_001242916 (OMIM: 265050,612502) collectin-11 is ( 221) 357 55.1 1.2e-07 NP_001311024 (OMIM: 607620) collectin-10 isoform 2 ( 208) 353 54.6 1.6e-07 XP_005250813 (OMIM: 607620) PREDICTED: collectin-1 ( 208) 353 54.6 1.6e-07 NP_001242913 (OMIM: 265050,612502) collectin-11 is ( 223) 331 52.0 1.1e-06 NP_001242918 (OMIM: 265050,612502) collectin-11 is ( 197) 309 49.2 6.3e-06 NP_005743 (OMIM: 613588) C-type lectin domain fami ( 206) 266 44.0 0.00025 NP_001231684 (OMIM: 613588) C-type lectin domain f ( 145) 261 43.2 0.0003 XP_005251116 (OMIM: 120324) PREDICTED: collagen al (1780) 253 43.5 0.003 XP_006716714 (OMIM: 120324) PREDICTED: collagen al (1796) 253 43.5 0.0031 NP_066933 (OMIM: 120324) collagen alpha-1(XIV) cha (1796) 253 43.5 0.0031 XP_016869298 (OMIM: 120324) PREDICTED: collagen al (1796) 253 43.5 0.0031 NP_001295323 (OMIM: 187520) tetranectin isoform 2 ( 160) 233 39.9 0.0034 XP_016862605 (OMIM: 187520) PREDICTED: tetranectin ( 169) 233 39.9 0.0035 XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 251 43.2 0.0035 NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 251 43.3 0.0037 NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 251 43.3 0.0037 NP_003269 (OMIM: 187520) tetranectin isoform 1prec ( 202) 233 40.0 0.0039 XP_016862606 (OMIM: 187520) PREDICTED: tetranectin ( 209) 233 40.0 0.004 >>XP_011538118 (OMIM: 154545,614372) PREDICTED: mannose- (248 aa) initn: 1697 init1: 1697 opt: 1697 Z-score: 1140.1 bits: 218.4 E(85289): 9.1e-57 Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 pF1KB6 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH 190 200 210 220 230 240 pF1KB6 LAVCEFPI :::::::: XP_011 LAVCEFPI >>NP_000233 (OMIM: 154545,614372) mannose-binding protei (248 aa) initn: 1697 init1: 1697 opt: 1697 Z-score: 1140.1 bits: 218.4 E(85289): 9.1e-57 Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 pF1KB6 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH 190 200 210 220 230 240 pF1KB6 LAVCEFPI :::::::: NP_000 LAVCEFPI >>XP_006717924 (OMIM: 154545,614372) PREDICTED: mannose- (248 aa) initn: 1697 init1: 1697 opt: 1697 Z-score: 1140.1 bits: 218.4 E(85289): 9.1e-57 Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 pF1KB6 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH 190 200 210 220 230 240 pF1KB6 LAVCEFPI :::::::: XP_006 LAVCEFPI >>XP_011538390 (OMIM: 178635) PREDICTED: pulmonary surfa (336 aa) initn: 623 init1: 274 opt: 562 Z-score: 391.2 bits: 80.3 E(85289): 4.7e-15 Smith-Waterman score: 599; 43.6% identity (67.4% similar) in 227 aa overlap (40-246:110-336) 10 20 30 40 50 60 pF1KB6 LLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----G .::..: : : : :::.: ::. : XP_011 QAGPVGPKGDNGSVGEPGPKGDTGPSGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPG 80 90 100 110 120 130 70 80 90 100 110 pF1KB6 LRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-KSPDGDSSL--AASERKA-------- : : : .:: :.:: : :: ::.:: :: :. :.:.: .:: :. XP_011 NTGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKGAKGESGLPDVASLRQQVEALQGQV 140 150 160 170 180 190 120 130 140 150 160 170 pF1KB6 --LQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENG ::. ... :: : :..::.:.: : : . : ... ::.. ...:.::.::::. XP_011 QHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENA 200 210 220 230 240 250 180 190 200 210 220 pF1KB6 AIQNLI---KEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNG :.:.:. .: :::..:: ::::.:. ::. :.:.:: ::::. :..:::: .. :: XP_011 ALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNG 260 270 280 290 300 310 230 240 pF1KB6 QWNDVPCSTSHLAVCEFPI .::: :. ..:.:::: XP_011 KWNDRACGEKRLVVCEF 320 330 >>NP_003010 (OMIM: 178635) pulmonary surfactant-associat (375 aa) initn: 542 init1: 274 opt: 562 Z-score: 390.7 bits: 80.4 E(85289): 5.1e-15 Smith-Waterman score: 599; 43.6% identity (67.4% similar) in 227 aa overlap (40-246:149-375) 10 20 30 40 50 60 pF1KB6 LLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----G .::..: : : : :::.: ::. : NP_003 REGPLGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPG 120 130 140 150 160 170 70 80 90 100 110 pF1KB6 LRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-KSPDGDSSL--AASERKA-------- : : : .:: :.:: : :: ::.:: :: :. :.:.: .:: :. NP_003 NTGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKGAKGESGLPDVASLRQQVEALQGQV 180 190 200 210 220 230 120 130 140 150 160 170 pF1KB6 --LQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENG ::. ... :: : :..::.:.: : : . : ... ::.. ...:.::.::::. NP_003 QHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENA 240 250 260 270 280 290 180 190 200 210 220 pF1KB6 AIQNLI---KEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNG :.:.:. .: :::..:: ::::.:. ::. :.:.:: ::::. :..:::: .. :: NP_003 ALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNG 300 310 320 330 340 350 230 240 pF1KB6 QWNDVPCSTSHLAVCEFPI .::: :. ..:.:::: NP_003 KWNDRACGEKRLVVCEF 360 370 >>XP_011538389 (OMIM: 178635) PREDICTED: pulmonary surfa (375 aa) initn: 542 init1: 274 opt: 562 Z-score: 390.7 bits: 80.4 E(85289): 5.1e-15 Smith-Waterman score: 599; 43.6% identity (67.4% similar) in 227 aa overlap (40-246:149-375) 10 20 30 40 50 60 pF1KB6 LLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQ----G .::..: : : : :::.: ::. : XP_011 REGPLGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPG 120 130 140 150 160 170 70 80 90 100 110 pF1KB6 LRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPG-KSPDGDSSL--AASERKA-------- : : : .:: :.:: : :: ::.:: :: :. :.:.: .:: :. XP_011 NTGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKGAKGESGLPDVASLRQQVEALQGQV 180 190 200 210 220 230 120 130 140 150 160 170 pF1KB6 --LQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENG ::. ... :: : :..::.:.: : : . : ... ::.. ...:.::.::::. XP_011 QHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENA 240 250 260 270 280 290 180 190 200 210 220 pF1KB6 AIQNLI---KEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNG :.:.:. .: :::..:: ::::.:. ::. :.:.:: ::::. :..:::: .. :: XP_011 ALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNG 300 310 320 330 340 350 230 240 pF1KB6 QWNDVPCSTSHLAVCEFPI .::: :. ..:.:::: XP_011 KWNDRACGEKRLVVCEF 360 370 >>XP_005270119 (OMIM: 178500,178630) PREDICTED: pulmonar (248 aa) initn: 479 init1: 179 opt: 518 Z-score: 363.8 bits: 74.8 E(85289): 1.6e-13 Smith-Waterman score: 535; 37.5% identity (62.2% similar) in 259 aa overlap (8-246:5-248) 10 20 30 40 50 pF1KB6 MSLFPSLPLLL-LSMVAASYSETVTCEDAQKTC---PAVIACSSPGINGFPGKDGRDGTK :: : : ..::: ..:: .. .: :.. . .:: .:.::.::::: : XP_005 MWLCPLALNLILMAAS---GAVCE-VKDVCVGSPGIPG--TPGSHGLPGRDGRDGLK 10 20 30 40 50 60 70 80 90 100 110 pF1KB6 GEKGEPGQGLRGLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPG-KSPDGDSSLAASE :. : :: .::::.. :::: :: : :: :.::.:: ..: : : : XP_005 GDPGPPGP-----MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG---LPAHL 60 70 80 90 100 120 130 140 150 160 pF1KB6 RKALQTEMARIKKWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVA . ::. . ... . . : ::.: : .::. .::. .. :.. . .: XP_005 DEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIA 110 120 130 140 150 160 170 180 190 200 210 220 pF1KB6 TPRNAAENGAIQNLIKEE---AFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDE .::: :: :: ...:. :..:.:. . :.: :. ..:::: .::: . :. : XP_005 VPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-E 170 180 190 200 210 220 230 240 pF1KB6 DCVLLLKNGQWNDVPCSTSHLAVCEFPI .:: . .::::: : :.:..::: XP_005 QCVEMYTDGQWNDRNCLYSRLTICEF 230 240 >>NP_001158116 (OMIM: 178500,178630) pulmonary surfactan (248 aa) initn: 479 init1: 179 opt: 518 Z-score: 363.8 bits: 74.8 E(85289): 1.6e-13 Smith-Waterman score: 535; 37.5% identity (62.2% similar) in 259 aa overlap (8-246:5-248) 10 20 30 40 50 pF1KB6 MSLFPSLPLLL-LSMVAASYSETVTCEDAQKTC---PAVIACSSPGINGFPGKDGRDGTK :: : : ..::: ..:: .. .: :.. . .:: .:.::.::::: : NP_001 MWLCPLALNLILMAAS---GAVCE-VKDVCVGSPGIPG--TPGSHGLPGRDGRDGLK 10 20 30 40 50 60 70 80 90 100 110 pF1KB6 GEKGEPGQGLRGLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPG-KSPDGDSSLAASE :. : :: .::::.. :::: :: : :: :.::.:: ..: : : : NP_001 GDPGPPGP-----MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG---LPAHL 60 70 80 90 100 120 130 140 150 160 pF1KB6 RKALQTEMARIKKWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVA . ::. . ... . . : ::.: : .::. .::. .. :.. . .: NP_001 DEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIA 110 120 130 140 150 160 170 180 190 200 210 220 pF1KB6 TPRNAAENGAIQNLIKEE---AFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDE .::: :: :: ...:. :..:.:. . :.: :. ..:::: .::: . :. : NP_001 VPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-E 170 180 190 200 210 220 230 240 pF1KB6 DCVLLLKNGQWNDVPCSTSHLAVCEFPI .:: . .::::: : :.:..::: NP_001 QCVEMYTDGQWNDRNCLYSRLTICEF 230 240 >>NP_005402 (OMIM: 178500,178630) pulmonary surfactant-a (248 aa) initn: 479 init1: 179 opt: 518 Z-score: 363.8 bits: 74.8 E(85289): 1.6e-13 Smith-Waterman score: 535; 37.5% identity (62.2% similar) in 259 aa overlap (8-246:5-248) 10 20 30 40 50 pF1KB6 MSLFPSLPLLL-LSMVAASYSETVTCEDAQKTC---PAVIACSSPGINGFPGKDGRDGTK :: : : ..::: ..:: .. .: :.. . .:: .:.::.::::: : NP_005 MWLCPLALNLILMAAS---GAVCE-VKDVCVGSPGIPG--TPGSHGLPGRDGRDGLK 10 20 30 40 50 60 70 80 90 100 110 pF1KB6 GEKGEPGQGLRGLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPG-KSPDGDSSLAASE :. : :: .::::.. :::: :: : :: :.::.:: ..: : : : NP_005 GDPGPPGP-----MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG---LPAHL 60 70 80 90 100 120 130 140 150 160 pF1KB6 RKALQTEMARIKKWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVA . ::. . ... . . : ::.: : .::. .::. .. :.. . .: NP_005 DEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIA 110 120 130 140 150 160 170 180 190 200 210 220 pF1KB6 TPRNAAENGAIQNLIKEE---AFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDE .::: :: :: ...:. :..:.:. . :.: :. ..:::: .::: . :. : NP_005 VPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-E 170 180 190 200 210 220 230 240 pF1KB6 DCVLLLKNGQWNDVPCSTSHLAVCEFPI .:: . .::::: : :.:..::: NP_005 QCVEMYTDGQWNDRNCLYSRLTICEF 230 240 >>NP_001158119 (OMIM: 178500,178630) pulmonary surfactan (248 aa) initn: 479 init1: 179 opt: 518 Z-score: 363.8 bits: 74.8 E(85289): 1.6e-13 Smith-Waterman score: 535; 37.5% identity (62.2% similar) in 259 aa overlap (8-246:5-248) 10 20 30 40 50 pF1KB6 MSLFPSLPLLL-LSMVAASYSETVTCEDAQKTC---PAVIACSSPGINGFPGKDGRDGTK :: : : ..::: ..:: .. .: :.. . .:: .:.::.::::: : NP_001 MWLCPLALNLILMAAS---GAVCE-VKDVCVGSPGIPG--TPGSHGLPGRDGRDGLK 10 20 30 40 50 60 70 80 90 100 110 pF1KB6 GEKGEPGQGLRGLQGPPGKLG-PPGN---PGPSGSPGPKGQKGDPG-KSPDGDSSLAASE :. : :: .::::.. :::: :: : :: :.::.:: ..: : : : NP_001 GDPGPPGP-----MGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPG---LPAHL 60 70 80 90 100 120 130 140 150 160 pF1KB6 RKALQTEMARIKKWLTFSLGK--------QVGNKFFLTNGEIMTFEKVKALCVKFQASVA . ::. . ... . . : ::.: : .::. .::. .. :.. . .: NP_001 DEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIA 110 120 130 140 150 160 170 180 190 200 210 220 pF1KB6 TPRNAAENGAIQNLIKEE---AFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDE .::: :: :: ...:. :..:.:. . :.: :. ..:::: .::: . :. : NP_001 VPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGK-E 170 180 190 200 210 220 230 240 pF1KB6 DCVLLLKNGQWNDVPCSTSHLAVCEFPI .:: . .::::: : :.:..::: NP_001 QCVEMYTDGQWNDRNCLYSRLTICEF 230 240 248 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 17:46:13 2016 done: Sat Nov 5 17:46:14 2016 Total Scan time: 8.020 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]