(Circular) (Six-base) MAPSORT of: pF1KB7004.seq Check: 2686 from: 1 to: 7133 pF1KB7004 7133 bp With 182 enzymes: SgfI * June 20, 2008 10:25 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 396 396 Size: 7133 AccI GT'mk_AC Cuts at: 4171 4171 Size: 7133 Acc65I G'GTAC_C Cuts at: 3237 4149 3237 Size: 912 6221 AclI AA'CG_TT Cuts at: 6973 6973 Size: 7133 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 842 1790 2494 2692 4958 5390 6137 6405 842 Size: 948 704 198 2266 432 747 268 1570 Fragments arranged by size: 2266 1570 948 747 704 432 268 198 AfeI AGC'GCT Cuts at: 967 967 Size: 7133 AflIII A'CryG_T Cuts at: 419 4485 5589 6566 419 Size: 4066 1104 977 986 Fragments arranged by size: 4066 1104 986 977 AgeI A'CCGG_T Cuts at: 5521 5521 Size: 7133 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 2464 3441 2464 Size: 977 6156 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2521 2553 2521 Size: 32 7101 AlwNI CAG_nnn'CTG Cuts at: 457 1791 2587 3594 3907 4438 6005 457 Size: 1334 796 1007 313 531 1567 1585 Fragments arranged by size: 1585 1567 1334 1007 796 531 313 ApaI G_GGCC'C Cuts at: 800 1151 1939 1993 2116 2227 2303 2581 800 Size: 351 788 54 123 111 76 278 5352 Fragments arranged by size: 5352 788 351 278 123 111 76 54 ApaLI G'TGCA_C Cuts at: 5903 5903 Size: 7133 ApoI r'AATT_y Cuts at: 241 624 1021 1695 1973 4137 6486 6742 241 Size: 383 397 674 278 2164 2349 256 632 Fragments arranged by size: 2349 2164 674 632 397 383 278 256 AseI AT'TA_AT Cuts at: 20 20 Size: 7133 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 7133 AvaI C'yCGr_G Cuts at: 1285 1406 1521 2523 3442 3608 4055 4153 1285 Size: 121 115 1002 919 166 447 98 4265 Fragments arranged by size: 4265 1002 919 447 166 121 115 98 AvrII C'CTAG_G Cuts at: 1131 1131 Size: 7133 BamHI G'GATC_C Cuts at: 2065 2720 4158 2065 Size: 655 1438 5040 Fragments arranged by size: 5040 1438 655 BanI G'GyrC_C Cuts at: 669 1464 2178 3237 4149 4563 4811 4846 669 Size: 795 714 1059 912 414 248 35 2956 Fragments arranged by size: 2956 1059 912 795 714 414 248 35 BanII G_rGCy'C Cuts at: 139 383 800 908 1151 1170 1939 1993 2116 Size: 244 417 108 243 19 769 54 123 Cuts at: 2116 2227 2303 2518 2581 3953 3979 4147 5177 Size: 111 76 215 63 1372 26 168 1030 Cuts at: 5177 139 Size: 2095 Fragments arranged by size: 2095 1372 1030 769 417 244 243 215 168 123 111 108 76 63 54 26 19 BbeI G_GCGC'C Cuts at: 4567 4815 4567 Size: 248 6885 BbsI GAAGACnn'nnnn_ Cuts at: 335 403 2836 335 Size: 68 2433 4632 Fragments arranged by size: 4632 2433 68 BbvCI CC'TCA_GC Cuts at: 3079 3079 Size: 7133 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 90 124 1387 1421 90 Size: 34 1263 34 5802 Fragments arranged by size: 5802 1263 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5031 5792 7133 5031 Size: 761 1341 5031 Fragments arranged by size: 5031 1341 761 BclI T'GATC_A Cuts at: 4653 4653 Size: 7133 BfrBI ATG'CAT Cuts at: 111 111 Size: 7133 BglI GCCn_nnn'nGGC Cuts at: 1114 2144 3380 3948 1114 Size: 1030 1236 568 4299 Fragments arranged by size: 4299 1236 1030 568 BglII A'GATC_T Cuts at: 3504 4648 6685 3504 Size: 1144 2037 3952 Fragments arranged by size: 3952 2037 1144 BlpI GC'TnA_GC Cuts at: 2165 4245 2165 Size: 2080 5053 Bme1580I G_kGCm'C Cuts at: 800 1151 1467 1939 1993 2116 2227 2303 2581 Size: 351 316 472 54 123 111 76 278 Cuts at: 2581 4758 4851 5907 800 Size: 2177 93 1056 2026 Fragments arranged by size: 2177 2026 1056 472 351 316 278 123 111 93 76 54 BmgBI CAC'GTC Cuts at: 700 1161 4074 700 Size: 461 2913 3759 Fragments arranged by size: 3759 2913 461 BmrI ACTGGGnnnn_n' Cuts at: 803 925 1236 2936 3317 4345 4426 4761 6905 Size: 122 311 1700 381 1028 81 335 2144 Cuts at: 6905 803 Size: 1031 Fragments arranged by size: 2144 1700 1031 1028 381 335 311 122 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 155 5500 155 Size: 5345 1788 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 386 973 1193 1360 1670 2375 2858 2990 3260 Size: 587 220 167 310 705 483 132 270 Cuts at: 3260 3455 3548 3965 386 Size: 195 93 417 3554 Fragments arranged by size: 3554 705 587 483 417 310 270 220 195 167 132 93 Bpu10I CC'TnA_GC Cuts at: 3079 3079 Size: 7133 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 1166 2026 2518 2632 3227 4309 5188 5680 5978 Size: 860 492 114 595 1082 879 492 298 Cuts at: 5978 1166 Size: 2321 Fragments arranged by size: 2321 1082 879 860 595 492 492 298 114 BsaI GGTCTCn'nnnn_ Cuts at: 1816 3792 6837 1816 Size: 1976 3045 2112 Fragments arranged by size: 3045 2112 1976 BsaAI yAC'GTr Cuts at: 420 4486 420 Size: 4066 3067 BsaBI GATnn'nnATC Cuts at: 6 2045 4647 6684 6 Size: 2039 2602 2037 455 Fragments arranged by size: 2602 2039 2037 455 BsaHI Gr'CG_yC Cuts at: 4564 4812 5514 7010 4564 Size: 248 702 1496 4687 Fragments arranged by size: 4687 1496 702 248 BsaWI w'CCGG_w Cuts at: 3535 3747 4322 4843 5521 5795 5942 6353 3535 Size: 212 575 521 678 274 147 411 4315 Fragments arranged by size: 4315 678 575 521 411 274 212 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 2373 2403 2676 2706 2856 2886 2373 Size: 30 273 30 150 30 6620 Fragments arranged by size: 6620 273 150 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 147 1350 2134 2378 3149 147 Size: 1203 784 244 771 4131 Fragments arranged by size: 4131 1203 784 771 244 BseYI C'CCAG_C Cuts at: 227 293 600 1460 1806 1846 1880 2104 2204 Size: 66 307 860 346 40 34 224 100 Cuts at: 2204 2511 2580 2760 2769 3098 3388 3583 4558 Size: 307 69 180 9 329 290 195 975 Cuts at: 4558 5316 5893 6389 227 Size: 758 577 496 971 Fragments arranged by size: 975 971 860 758 577 496 346 329 307 307 290 224 195 180 100 69 66 40 34 9 BsiEI CG_ry'CG Cuts at: 104 4675 4721 5929 104 Size: 4571 46 1208 1308 Fragments arranged by size: 4571 1308 1208 46 BsiHKAI G_wGCw'C Cuts at: 139 959 1035 1170 2201 4147 4925 5115 5907 Size: 820 76 135 1031 1946 778 190 792 Cuts at: 5907 139 Size: 1365 Fragments arranged by size: 1946 1365 1031 820 792 778 190 135 76 BsmI GAATG_Cn' Cuts at: 111 2451 111 Size: 2340 4793 BsmBI CGTCTCn'nnnn_ Cuts at: 492 492 Size: 7133 Bsp1286I G_dGCh'C Cuts at: 139 383 800 908 959 1035 1151 1170 1467 Size: 244 417 108 51 76 116 19 297 Cuts at: 1467 1939 1993 2116 2201 2227 2303 2518 2581 Size: 472 54 123 85 26 76 215 63 Cuts at: 2581 3953 3979 4147 4758 4851 4925 5115 5177 Size: 1372 26 168 611 93 74 190 62 Cuts at: 5177 5907 139 Size: 730 1365 Fragments arranged by size: 1372 1365 730 611 472 417 297 244 215 190 168 123 116 108 93 85 76 76 74 63 62 54 51 26 26 19 BspEI T'CCGG_A Cuts at: 3747 6353 3747 Size: 2606 4527 BspHI T'CATG_A Cuts at: 4031 6309 4031 Size: 2278 4855 BspMI ACCTGCnnnn'nnnn_ Cuts at: 396 3288 3404 4183 4397 4699 5080 396 Size: 2892 116 779 214 302 381 2449 Fragments arranged by size: 2892 2449 779 381 302 214 116 BsrBI CCG'CTC Cuts at: 50 5425 5479 6963 7128 50 Size: 5375 54 1484 165 55 Fragments arranged by size: 5375 1484 165 55 54 BsrDI GCAATG_nn' Cuts at: 2942 5045 2942 Size: 2103 5030 BsrFI r'CCGG_y Cuts at: 2321 5131 5312 5521 2321 Size: 2810 181 209 3933 Fragments arranged by size: 3933 2810 209 181 BssSI C'ACGA_G Cuts at: 5404 5762 5404 Size: 358 6775 BstAPI GCAn_nnn'nTGC Cuts at: 4510 4510 Size: 7133 BstBI TT'CG_AA Cuts at: 5494 5494 Size: 7133 BstXI CCAn_nnnn'nTGG Cuts at: 3646 4102 3646 Size: 456 6677 BstYI r'GATC_y Cuts at: 1 864 2065 2720 3504 4158 4625 4648 4983 Size: 863 1201 655 784 654 467 23 335 Cuts at: 4983 5229 6241 6327 6339 6685 1 Size: 246 1012 86 12 346 449 Fragments arranged by size: 1201 1012 863 784 655 654 467 449 346 335 246 86 23 12 Bsu36I CC'TnA_GG Cuts at: 2117 2117 Size: 7133 BtgI C'CryG_G Cuts at: 357 1829 2750 3059 3140 3911 357 Size: 1472 921 309 81 771 3579 Fragments arranged by size: 3579 1472 921 771 309 81 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 2537 5083 5264 5427 2537 Size: 2546 181 163 4243 Fragments arranged by size: 4243 2546 181 163 BtsI GCAGTG_nn' Cuts at: 775 830 1372 2182 4376 775 Size: 55 542 810 2194 3532 Fragments arranged by size: 3532 2194 810 542 55 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 3041 3076 3122 3157 3041 Size: 35 46 35 7017 Fragments arranged by size: 7017 46 35 35 DraI TTT'AAA Cuts at: 4132 4132 Size: 7133 DraIII CAC_nnn'GTG Cuts at: 1039 1039 Size: 7133 DrdI GACnn_nn'nnGTC Cuts at: 1387 4839 5697 1387 Size: 3452 858 2823 Fragments arranged by size: 3452 2823 858 EaeI y'GGCC_r Cuts at: 360 437 608 1660 1707 1731 1826 2981 3381 Size: 77 171 1052 47 24 95 1155 400 Cuts at: 3381 3876 4718 4892 5283 5310 6655 360 Size: 495 842 174 391 27 1345 838 Fragments arranged by size: 1345 1155 1052 842 838 495 400 391 174 171 95 77 47 27 24 EagI C'GGCC_G Cuts at: 4718 4718 Size: 7133 EarI CTCTTCn'nnn_ Cuts at: 861 1322 1327 1766 2694 5156 5366 861 Size: 461 5 439 928 2462 210 2628 Fragments arranged by size: 2628 2462 928 461 439 210 5 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 869 2427 5341 5651 5797 6943 869 Size: 1558 2914 310 146 1146 1059 Fragments arranged by size: 2914 1558 1146 1059 310 146 EcoICRI GAG'CTC Cuts at: 137 1168 4145 137 Size: 1031 2977 3125 Fragments arranged by size: 3125 2977 1031 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 386 842 973 1193 1360 1670 1790 2375 2494 Size: 456 131 220 167 310 120 585 119 Cuts at: 2494 2692 2858 2990 3260 3455 3548 3965 4958 Size: 198 166 132 270 195 93 417 993 Cuts at: 4958 5390 6137 6405 386 Size: 432 747 268 1114 Fragments arranged by size: 1114 993 747 585 456 432 417 310 270 268 220 198 195 167 166 132 131 120 119 93 EcoNI CCTnn'n_nnAGG Cuts at: 749 940 1135 1454 1733 749 Size: 191 195 319 279 6149 Fragments arranged by size: 6149 319 279 195 191 EcoO109I rG'GnC_Cy Cuts at: 1141 1148 1258 1423 1935 1936 1990 2113 2224 Size: 7 110 165 512 1 54 123 111 Cuts at: 2224 3145 3168 3178 3218 3373 3439 3448 3643 Size: 921 23 10 40 155 66 9 195 Cuts at: 3643 3832 3940 4015 4052 4099 4272 1141 Size: 189 108 75 37 47 173 4002 Fragments arranged by size: 4002 921 512 195 189 173 165 155 123 111 110 108 75 66 54 47 40 37 23 10 9 7 1 EcoRI G'AATT_C Cuts at: 624 1021 1973 4137 624 Size: 397 952 2164 3620 Fragments arranged by size: 3620 2164 952 397 EcoRV GAT'ATC Cuts at: 557 990 557 Size: 433 6700 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 3394 5152 3394 Size: 1758 5375 FspI TGC'GCA Cuts at: 4914 4914 Size: 7133 HaeII r_GCGC'y Cuts at: 541 969 1887 4567 4815 5837 6816 541 Size: 428 918 2680 248 1022 979 858 Fragments arranged by size: 2680 1022 979 918 858 428 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 177 209 922 954 1377 1409 2070 2102 2676 Size: 32 713 32 423 32 661 32 574 Cuts at: 2676 2708 2983 3015 3114 3146 3225 3257 3819 Size: 32 275 32 99 32 79 32 562 Cuts at: 3819 3851 3882 3914 4975 5005 5007 5037 177 Size: 32 31 32 1061 30 2 30 2273 Fragments arranged by size: 2273 1061 713 661 574 562 423 275 99 79 32 32 32 32 32 32 32 32 32 32 31 30 30 2 HincII GTy'rAC Cuts at: 2058 4172 2058 Size: 2114 5019 KasI G'GCGC_C Cuts at: 4563 4811 4563 Size: 248 6885 KpnI G_GTAC'C Cuts at: 3241 4153 3241 Size: 912 6221 MfeI C'AATT_G Cuts at: 2294 2294 Size: 7133 MluI A'CGCG_T Cuts at: 6566 6566 Size: 7133 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 2093 3546 3840 5804 5988 2093 Size: 1453 294 1964 184 3238 Fragments arranged by size: 3238 1964 1453 294 184 MscI TGG'CCA Cuts at: 362 439 1662 1709 1828 2983 4894 362 Size: 77 1223 47 119 1155 1911 2601 Fragments arranged by size: 2601 1911 1223 1155 119 77 47 MslI CAynn'nnrTG Cuts at: 1193 1855 2679 3889 3991 5122 5249 1193 Size: 662 824 1210 102 1131 127 3077 Fragments arranged by size: 3077 1210 1131 824 662 127 102 MspA1I CmG'CkG Cuts at: 231 951 1724 1791 1806 2559 2584 3904 4244 Size: 720 773 67 15 753 25 1320 340 Cuts at: 4244 4558 4918 5931 6176 231 Size: 314 360 1013 245 1188 Fragments arranged by size: 1320 1188 1013 773 753 720 360 340 314 245 67 25 15 NaeI GCC'GGC Cuts at: 2323 5314 2323 Size: 2991 4142 NarI GG'CG_CC Cuts at: 4564 4812 4564 Size: 248 6885 NcoI C'CATG_G Cuts at: 357 1829 2750 357 Size: 1472 921 4740 Fragments arranged by size: 4740 1472 921 NdeI CA'TA_TG Cuts at: 1277 2333 1277 Size: 1056 6077 NgoMIV G'CCGG_C Cuts at: 2321 5312 2321 Size: 2991 4142 NsiI A_TGCA'T Cuts at: 113 113 Size: 7133 NspI r_CATG'y Cuts at: 1002 1506 1551 2157 2571 3483 3669 4186 4686 Size: 504 45 606 414 912 186 517 500 Cuts at: 4686 5593 1002 Size: 907 2542 Fragments arranged by size: 2542 912 907 606 517 504 500 414 186 45 PasI CC'CwG_GG Cuts at: 840 1819 3264 3639 3964 840 Size: 979 1445 375 325 4009 Fragments arranged by size: 4009 1445 979 375 325 PciI A'CATG_T Cuts at: 5589 5589 Size: 7133 PfoI T'CCnGG_A Cuts at: 1376 3645 1376 Size: 2269 4864 PmeI GTTT'AAAC Cuts at: 4132 4132 Size: 7133 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2887 2919 3602 3634 6272 6304 2887 Size: 32 683 32 2638 32 3716 Fragments arranged by size: 3716 2638 683 32 32 32 PpuMI rG'GwC_Cy Cuts at: 1141 1258 1423 3145 3168 3218 3448 3643 3832 Size: 117 165 1722 23 50 230 195 189 Cuts at: 3832 4015 4099 1141 Size: 183 84 4175 Fragments arranged by size: 4175 1722 230 195 189 183 165 117 84 50 23 PshAI GACnn'nnGTC Cuts at: 832 832 Size: 7133 PspOMI G'GGCC_C Cuts at: 796 1147 1935 1989 2112 2223 2299 2577 796 Size: 351 788 54 123 111 76 278 5352 Fragments arranged by size: 5352 788 351 278 123 111 76 54 PspXI vC'TCGA_Gb Cuts at: 3608 3608 Size: 7133 PstI C_TGCA'G Cuts at: 453 650 1313 3512 4180 4865 453 Size: 197 663 2199 668 685 2721 Fragments arranged by size: 2721 2199 685 668 663 197 PvuI CG_AT'CG Cuts at: 104 104 Size: 7133 PvuII CAG'CTG Cuts at: 231 951 1791 1806 2559 2584 3904 4558 4918 Size: 720 840 15 753 25 1320 654 360 Cuts at: 4918 231 Size: 2446 Fragments arranged by size: 2446 1320 840 753 720 654 360 25 15 RsrII CG'GwC_CG Cuts at: 5328 5328 Size: 7133 SacI G_AGCT'C Cuts at: 139 1170 4147 139 Size: 1031 2977 3125 Fragments arranged by size: 3125 2977 1031 SalI G'TCGA_C Cuts at: 4170 4170 Size: 7133 SanDI GG'GwC_CC Cuts at: 3145 3168 3218 4015 3145 Size: 23 50 797 6263 Fragments arranged by size: 6263 797 50 23 SapI GCTCTTCn'nnn_ Cuts at: 861 5156 5366 861 Size: 4295 210 2628 Fragments arranged by size: 4295 2628 210 SbfI CC_TGCA'GG Cuts at: 4180 4180 Size: 7133 ScaI AGT'ACT Cuts at: 6650 6650 Size: 7133 SexAI A'CCwGG_T Cuts at: 1638 1638 Size: 7133 SfcI C'TryA_G Cuts at: 33 200 329 449 646 749 1309 2804 3508 Size: 167 129 120 197 103 560 1495 704 Cuts at: 3508 4176 4861 5854 6045 33 Size: 668 685 993 191 1121 Fragments arranged by size: 1495 1121 993 704 685 668 560 197 191 167 129 120 103 SfiI GGCCn_nnn'nGGCC Cuts at: 1114 3380 1114 Size: 2266 4867 SfoI GGC'GCC Cuts at: 4565 4813 4565 Size: 248 6885 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 7133 SmaI CCC'GGG Cuts at: 3444 4057 4155 3444 Size: 613 98 6422 Fragments arranged by size: 6422 613 98 SmlI C'TyrA_G Cuts at: 1181 2005 2533 2647 3242 3608 4288 5203 5695 Size: 824 528 114 595 366 680 915 492 Cuts at: 5695 5957 1181 Size: 262 2357 Fragments arranged by size: 2357 915 824 680 595 528 492 366 262 114 SpeI A'CTAG_T Cuts at: 67 67 Size: 7133 SphI G_CATG'C Cuts at: 1002 2571 3483 4186 4686 1002 Size: 1569 912 703 500 3449 Fragments arranged by size: 3449 1569 912 703 500 SspI AAT'ATT Cuts at: 3601 3601 Size: 7133 StyI C'CwwG_G Cuts at: 357 1131 1758 1829 2420 2750 3378 4095 4267 Size: 774 627 71 591 330 628 717 172 Cuts at: 4267 4621 357 Size: 354 2869 Fragments arranged by size: 2869 774 717 628 627 591 354 330 172 71 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 675 693 3973 4072 4716 4849 5308 5517 675 Size: 18 3280 99 644 133 459 209 2291 Fragments arranged by size: 3280 2291 644 459 209 133 99 18 TatI w'GTAC_w Cuts at: 2854 3279 6648 2854 Size: 425 3369 3339 Fragments arranged by size: 3369 3339 425 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 265 297 2373 2405 6650 6682 265 Size: 32 2076 32 4245 32 716 Fragments arranged by size: 4245 2076 716 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1640 4930 1640 Size: 3290 3843 XbaI T'CTAG_A Cuts at: 1633 4164 1633 Size: 2531 4602 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1894 2212 4628 1894 Size: 318 2416 4399 Fragments arranged by size: 4399 2416 318 XhoI C'TCGA_G Cuts at: 3608 3608 Size: 7133 XmaI C'CCGG_G Cuts at: 3442 4055 4153 3442 Size: 613 98 6422 Fragments arranged by size: 6422 613 98 XmnI GAAnn'nnTTC Cuts at: 1021 1220 1021 Size: 199 6934 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AfeI AflIII AgeI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NsiI NspI PasI PciI PfoI PmeI PpiI PpuMI PshAI PspOMI PspXI PstI PvuI PvuII RsrII SacI SalI SanDI SapI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SmaI SmlI SpeI SphI SspI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AatII AflII AhdI AleI AscI BaeI BmtI BsgI BsiWI BsrGI BssHII BstEII BstZ17I ClaI FseI FspAI HindIII HpaI NheI NotI NruI PacI PflMI PmlI PsiI PsrI SacII SgrAI SnaBI SrfI StuI SwaI ZraI