Result of FASTA (ccds) for
pF1KB7083
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7083, 126 aa
1>>>pF1KB7083 126 - 126 aa - 126 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1949+/-0.000721; mu= 12.6228+/- 0.044
mean_var=73.2712+/-14.195, 0's: 0 Z-trim(110.2): 25 B-trim: 266 in 1/52
Lambda= 0.149833
statistics sampled from 11402 (11427) to 11402 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.351), width: 16
Scan time: 1.130
The best scores are: opt bits E(32554)
CCDS4587.1 HIST1H2BD gene_id:3017|Hs108|chr6 ( 126) 787 178.3 1.1e-45
CCDS4633.1 HIST1H2BN gene_id:8341|Hs108|chr6 ( 126) 784 177.6 1.8e-45
CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6 ( 126) 782 177.2 2.4e-45
CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1 ( 126) 781 177.0 2.8e-45
CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6 ( 126) 778 176.3 4.3e-45
CCDS4601.1 HIST1H2BH gene_id:8345|Hs108|chr6 ( 126) 778 176.3 4.3e-45
CCDS4618.1 HIST1H2BJ gene_id:8970|Hs108|chr6 ( 126) 777 176.1 5e-45
CCDS4640.1 HIST1H2BO gene_id:8348|Hs108|chr6 ( 126) 777 176.1 5e-45
CCDS30846.1 HIST2H2BF gene_id:440689|Hs108|chr1 ( 126) 773 175.2 9.2e-45
CCDS53359.1 HIST2H2BF gene_id:440689|Hs108|chr1 ( 134) 773 175.3 9.6e-45
CCDS4629.1 HIST1H2BM gene_id:8342|Hs108|chr6 ( 126) 771 174.8 1.2e-44
CCDS1574.1 HIST3H2BB gene_id:128312|Hs108|chr1 ( 126) 765 173.5 3e-44
CCDS4625.1 HIST1H2BL gene_id:8340|Hs108|chr6 ( 126) 760 172.4 6.4e-44
CCDS4563.1 HIST1H2BA gene_id:255626|Hs108|chr6 ( 127) 667 152.3 7.3e-38
CCDS55468.1 H2BFM gene_id:286436|Hs108|chrX ( 154) 322 77.8 2.4e-15
CCDS35362.1 H2BFWT gene_id:158983|Hs108|chrX ( 175) 297 72.4 1.1e-13
>>CCDS4587.1 HIST1H2BD gene_id:3017|Hs108|chr6 (126 aa)
initn: 787 init1: 787 opt: 787 Z-score: 933.5 bits: 178.3 E(32554): 1.1e-45
Smith-Waterman score: 787; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4633.1 HIST1H2BN gene_id:8341|Hs108|chr6 (126 aa)
initn: 784 init1: 784 opt: 784 Z-score: 930.0 bits: 177.6 E(32554): 1.8e-45
Smith-Waterman score: 784; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS46 KYTSSK
>>CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS46 KYTSSK
>>CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6 (126 aa)
initn: 782 init1: 782 opt: 782 Z-score: 927.6 bits: 177.2 E(32554): 2.4e-45
Smith-Waterman score: 782; 97.6% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::.::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1 (126 aa)
initn: 781 init1: 781 opt: 781 Z-score: 926.5 bits: 177.0 E(32554): 2.8e-45
Smith-Waterman score: 781; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS93 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::::
CCDS93 KYTSSK
>>CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6 (126 aa)
initn: 824 init1: 778 opt: 778 Z-score: 923.0 bits: 176.3 E(32554): 4.3e-45
Smith-Waterman score: 778; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KB7 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KB7 KYTSSK
::::.:
CCDS46 KYTSAK
126 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:29:12 2016 done: Fri Nov 4 04:29:12 2016
Total Scan time: 1.130 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]