FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7096, 193 aa
  1>>>pF1KB7096 193 - 193 aa - 193 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3504+/-0.000571; mu= 10.3589+/- 0.035
 mean_var=110.3267+/-22.278, 0's: 0 Z-trim(117.3): 2  B-trim: 587 in 2/52
 Lambda= 0.122105
 statistics sampled from 17986 (17987) to 17986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.857), E-opt: 0.2 (0.553), width:  16
 Scan time:  2.430

The best scores are:                                      opt bits E(32554)
CCDS34153.1 ANXA2R gene_id:389289|Hs108|chr5       ( 193) 1445 263.7   5e-71


>>CCDS34153.1 ANXA2R gene_id:389289|Hs108|chr5            (193 aa)
 initn: 1445 init1: 1445 opt: 1445  Z-score: 1388.7  bits: 263.7 E(32554): 5e-71
Smith-Waterman score: 1445; 100.0% identity (100.0% similar) in 193 aa overlap (1-193:1-193)

               10        20        30        40        50        60
pF1KB7 MEQHFLGCVKRAWDSAEVAPEPQPPPIVSSEDRGPWPLPLYPVLGEYSLDSCDLGLLSSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MEQHFLGCVKRAWDSAEVAPEPQPPPIVSSEDRGPWPLPLYPVLGEYSLDSCDLGLLSSP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CWRLPGVYWQNGLSPGVQSTLEPSTAKPTEFSWPGTQKQQEAPVEEVGQAEEPDRLRLQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CWRLPGVYWQNGLSPGVQSTLEPSTAKPTEFSWPGTQKQQEAPVEEVGQAEEPDRLRLQQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 LPWSSPLHPWDRQQDTEVCDSGCLLERRHPPALQPWRHLPGFSDCLEWILRVGFAAFSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LPWSSPLHPWDRQQDTEVCDSGCLLERRHPPALQPWRHLPGFSDCLEWILRVGFAAFSVL
              130       140       150       160       170       180

              190   
pF1KB7 WACCSRICGAKQP
       :::::::::::::
CCDS34 WACCSRICGAKQP
              190   




193 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:40:36 2016 done: Fri Nov  4 04:40:36 2016
 Total Scan time:  2.430 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]