Result of FASTA (omim) for
pF1KB7110
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7110, 260 aa
1>>>pF1KB7110 260 - 260 aa - 260 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0646+/-0.000403; mu= 17.0642+/- 0.025
mean_var=80.1787+/-17.045, 0's: 0 Z-trim(112.8): 109 B-trim: 1220 in 1/52
Lambda= 0.143234
statistics sampled from 21756 (21870) to 21756 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.256), width: 16
Scan time: 6.720
The best scores are: opt bits E(85289)
NP_001002914 (OMIM: 609848) BTB/POZ domain-contain ( 232) 529 118.8 9.1e-27
NP_076981 (OMIM: 615240) BTB/POZ domain-containing ( 234) 350 81.8 1.3e-15
NP_001123466 (OMIM: 615240) BTB/POZ domain-contain ( 283) 350 81.9 1.4e-15
XP_011525599 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 350 81.9 1.4e-15
XP_016882772 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 350 81.9 1.4e-15
XP_011525600 (OMIM: 615240) PREDICTED: BTB/POZ dom ( 283) 350 81.9 1.4e-15
NP_001123467 (OMIM: 615240) BTB/POZ domain-contain ( 283) 350 81.9 1.4e-15
NP_001129677 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 338 79.3 7.5e-15
XP_016881197 (OMIM: 181270,613420) PREDICTED: BTB/ ( 257) 338 79.3 7.5e-15
NP_945342 (OMIM: 181270,613420) BTB/POZ domain-con ( 257) 338 79.3 7.5e-15
NP_001245150 (OMIM: 181270,613420) BTB/POZ domain- ( 257) 338 79.3 7.5e-15
NP_001245151 (OMIM: 181270,613420) BTB/POZ domain- ( 265) 338 79.3 7.6e-15
NP_001136202 (OMIM: 181270,613420) BTB/POZ domain- ( 865) 338 79.8 1.8e-14
XP_011535975 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 286) 298 71.1 2.5e-12
XP_011535974 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 304) 298 71.1 2.6e-12
XP_006714852 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 298 71.3 3.3e-12
XP_005268549 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 298 71.3 3.3e-12
XP_005268550 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 298 71.3 3.3e-12
XP_011535973 (OMIM: 613423) PREDICTED: BTB/POZ dom ( 428) 298 71.3 3.3e-12
NP_065819 (OMIM: 613423) BTB/POZ domain-containing ( 428) 298 71.3 3.3e-12
NP_612453 (OMIM: 610521) BTB/POZ domain-containing ( 325) 284 68.3 2e-11
XP_016878594 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 175) 280 67.2 2.3e-11
NP_849194 (OMIM: 608947) BTB/POZ domain-containing ( 329) 269 65.2 1.8e-10
NP_955751 (OMIM: 607947) potassium channel regulat ( 229) 267 64.6 1.8e-10
NP_775876 (OMIM: 607947) potassium channel regulat ( 272) 267 64.7 2e-10
NP_001304328 (OMIM: 613421) BTB/POZ domain-contain ( 290) 266 64.5 2.5e-10
NP_114160 (OMIM: 613421) BTB/POZ domain-containing ( 313) 266 64.5 2.6e-10
XP_016878595 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 173) 262 63.5 3e-10
NP_001304324 (OMIM: 613421) BTB/POZ domain-contain ( 314) 263 63.9 4e-10
NP_001161433 (OMIM: 611725,611726) BTB/POZ domain- ( 288) 261 63.5 5e-10
NP_694578 (OMIM: 611725,611726) BTB/POZ domain-con ( 289) 261 63.5 5e-10
XP_011544085 (OMIM: 608947) PREDICTED: BTB/POZ dom ( 347) 259 63.1 7.6e-10
NP_066960 (OMIM: 191161) BTB/POZ domain-containing ( 316) 253 61.9 1.7e-09
NP_001306223 (OMIM: 613272) BTB/POZ domain-contain ( 813) 257 63.1 1.9e-09
NP_057205 (OMIM: 613272) BTB/POZ domain-containing ( 815) 257 63.1 1.9e-09
XP_016880482 (OMIM: 191161) PREDICTED: BTB/POZ dom ( 391) 253 61.9 2e-09
XP_011528679 (OMIM: 616386,616398) PREDICTED: BTB/ ( 249) 230 57.0 3.8e-08
XP_011528676 (OMIM: 616386,616398) PREDICTED: BTB/ ( 370) 230 57.2 5.1e-08
NP_001269615 (OMIM: 616386,616398) BTB/POZ domain- ( 220) 212 53.2 4.6e-07
NP_001269614 (OMIM: 616386,616398) BTB/POZ domain- ( 225) 212 53.2 4.7e-07
NP_078957 (OMIM: 616386,616398) BTB/POZ domain-con ( 297) 212 53.4 5.7e-07
XP_005261801 (OMIM: 616386,616398) PREDICTED: BTB/ ( 315) 212 53.4 6e-07
NP_001269613 (OMIM: 616386,616398) BTB/POZ domain- ( 321) 212 53.4 6e-07
XP_005261800 (OMIM: 616386,616398) PREDICTED: BTB/ ( 328) 212 53.4 6.1e-07
XP_005261799 (OMIM: 616386,616398) PREDICTED: BTB/ ( 352) 212 53.4 6.5e-07
XP_005261798 (OMIM: 616386,616398) PREDICTED: BTB/ ( 352) 212 53.4 6.5e-07
NP_061865 (OMIM: 611285) BTB/POZ domain-containing ( 234) 184 47.5 2.7e-05
XP_011522877 (OMIM: 613422) PREDICTED: BTB/POZ dom ( 226) 181 46.8 4e-05
NP_056168 (OMIM: 613422) BTB/POZ domain-containing ( 263) 181 46.9 4.4e-05
XP_011539730 (OMIM: 605411,607346,616399) PREDICTE ( 369) 167 44.1 0.00042
>>NP_001002914 (OMIM: 609848) BTB/POZ domain-containing (232 aa)
initn: 457 init1: 246 opt: 529 Z-score: 601.5 bits: 118.8 E(85289): 9.1e-27
Smith-Waterman score: 529; 39.7% identity (68.2% similar) in 239 aa overlap (28-259:1-232)
10 20 30 40 50
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSG--KMPTKRDSQG--NCFIDRDGKVF
:::::: . :: . .::: . :::::::.:
NP_001 MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAF
10 20 30
60 70 80 90 100 110
pF1KB7 RYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEV-ELSKAEKNAMLNIT
:.:::::: ..::::. . : .::: ::::::..::..::.: :. . . : :.:.
NP_001 RHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQGTPAPTAALLHAD
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB7 LNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSIT
.. . :::..:..:. : ::: ....: ::.: :. : : .. : ..:. . .
NP_001 VDVSPRLVHFSARRGPHHYELSSVQVDTFRANLFCTDSECLGALRAR-FGVASGDRAEGS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 SHLQDPNHLTLDWVANVEGLPEEEYTKQNLKRLWVV-PANK-QINSFQVFVEEVLKIALS
:.. :.:. ::: :: . .:. ::. :... .. . :.::::..::
NP_001 PHFH------LEWAPRPVELPEVEYGRLGLQPLWTGGPGERREVVGTPSFLEEVLRVALE
160 170 180 190 200
240 250 260
pF1KB7 DGFCIDSSHPHALDFMNNKIIRLIRYR
:: .:: : :..:.. .:..:.
NP_001 HGFRLDSVFPDPEDLLNSRSLRFVRH
210 220 230
>>NP_076981 (OMIM: 615240) BTB/POZ domain-containing pro (234 aa)
initn: 372 init1: 221 opt: 350 Z-score: 401.6 bits: 81.8 E(85289): 1.3e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
NP_076 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
NP_076 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
NP_076 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>NP_001123466 (OMIM: 615240) BTB/POZ domain-containing (283 aa)
initn: 372 init1: 221 opt: 350 Z-score: 400.5 bits: 81.9 E(85289): 1.4e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
NP_001 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
NP_001 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
NP_001 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>XP_011525599 (OMIM: 615240) PREDICTED: BTB/POZ domain- (283 aa)
initn: 372 init1: 221 opt: 350 Z-score: 400.5 bits: 81.9 E(85289): 1.4e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
XP_011 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
XP_011 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
XP_011 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>XP_016882772 (OMIM: 615240) PREDICTED: BTB/POZ domain- (283 aa)
initn: 372 init1: 221 opt: 350 Z-score: 400.5 bits: 81.9 E(85289): 1.4e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
XP_016 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
XP_016 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
XP_016 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>XP_011525600 (OMIM: 615240) PREDICTED: BTB/POZ domain- (283 aa)
initn: 372 init1: 221 opt: 350 Z-score: 400.5 bits: 81.9 E(85289): 1.4e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
XP_011 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
XP_011 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
XP_011 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>NP_001123467 (OMIM: 615240) BTB/POZ domain-containing (283 aa)
initn: 372 init1: 221 opt: 350 Z-score: 400.5 bits: 81.9 E(85289): 1.4e-15
Smith-Waterman score: 350; 46.7% identity (81.3% similar) in 107 aa overlap (4-109:57-163)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..::: .. .:
NP_001 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::.:.:::::.: ::.::....:: .:: .::.::.
NP_001 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
.. :.. . : . ...
NP_001 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN
150 160 170 180 190 200
>>NP_001129677 (OMIM: 181270,613420) BTB/POZ domain-cont (257 aa)
initn: 338 init1: 208 opt: 338 Z-score: 387.6 bits: 79.3 E(85289): 7.5e-15
Smith-Waterman score: 338; 50.5% identity (82.1% similar) in 95 aa overlap (4-97:31-125)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..:.: .: .:
NP_001 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::::::::::.: .:.::... :: .:: ..:.::.
NP_001 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
. ..
NP_001 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN
130 140 150 160 170 180
>>XP_016881197 (OMIM: 181270,613420) PREDICTED: BTB/POZ (257 aa)
initn: 338 init1: 208 opt: 338 Z-score: 387.6 bits: 79.3 E(85289): 7.5e-15
Smith-Waterman score: 338; 50.5% identity (82.1% similar) in 95 aa overlap (4-97:31-125)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..:.: .: .:
XP_016 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::::::::::.: .:.::... :: .:: ..:.::.
XP_016 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
. ..
XP_016 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN
130 140 150 160 170 180
>>NP_945342 (OMIM: 181270,613420) BTB/POZ domain-contain (257 aa)
initn: 338 init1: 208 opt: 338 Z-score: 387.6 bits: 79.3 E(85289): 7.5e-15
Smith-Waterman score: 338; 50.5% identity (82.1% similar) in 95 aa overlap (4-97:31-125)
10 20 30
pF1KB7 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMF
:. ..:::..::.::::::..:.: .: .:
NP_945 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 SGKMPTKRDS-QGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPL
.: : :: . . ::::::..:::::::::::.: .:.::... :: .:: ..:.::.
NP_945 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 IEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTS
. ..
NP_945 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN
130 140 150 160 170 180
260 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:45:36 2016 done: Fri Nov 4 04:45:37 2016
Total Scan time: 6.720 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]