Result of FASTA (omim) for
pF1KB7113
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7113, 270 aa
1>>>pF1KB7113 270 - 270 aa - 270 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1294+/-0.000315; mu= 15.8555+/- 0.020
mean_var=62.9584+/-12.665, 0's: 0 Z-trim(115.9): 47 B-trim: 0 in 0/53
Lambda= 0.161639
statistics sampled from 26679 (26728) to 26679 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.313), width: 16
Scan time: 6.970
The best scores are: opt bits E(85289)
NP_001005752 (OMIM: 133200,220290,603324,612644) g ( 270) 1908 453.2 2.3e-127
NP_076872 (OMIM: 133200,220290,603324,612644) gap ( 270) 1908 453.2 2.3e-127
NP_694944 (OMIM: 133200,605425) gap junction beta- ( 266) 1085 261.3 1.4e-69
XP_011538981 (OMIM: 133200,605425) PREDICTED: gap ( 266) 1085 261.3 1.4e-69
XP_005270808 (OMIM: 604493) PREDICTED: gap junctio ( 273) 1051 253.4 3.4e-67
NP_005259 (OMIM: 604493) gap junction beta-5 prote ( 273) 1051 253.4 3.4e-67
XP_011533351 (OMIM: 121011,124500,148210,148350,14 ( 226) 884 214.4 1.5e-55
NP_003995 (OMIM: 121011,124500,148210,148350,14920 ( 226) 884 214.4 1.5e-55
XP_016875847 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
XP_016875848 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
XP_016875849 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
NP_001103690 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
XP_016875846 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
NP_001103691 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
NP_006774 (OMIM: 129500,220290,304400,604418,61264 ( 261) 868 210.7 2.3e-54
NP_001103689 (OMIM: 129500,220290,304400,604418,61 ( 261) 868 210.7 2.3e-54
XP_005248773 (OMIM: 611921) PREDICTED: gap junctio ( 223) 865 209.9 3.3e-54
NP_940970 (OMIM: 611921) gap junction beta-7 prote ( 223) 865 209.9 3.3e-54
NP_001091111 (OMIM: 302800,304040) gap junction be ( 283) 850 206.5 4.5e-53
XP_011529209 (OMIM: 302800,304040) PREDICTED: gap ( 283) 850 206.5 4.5e-53
XP_016884897 (OMIM: 302800,304040) PREDICTED: gap ( 283) 850 206.5 4.5e-53
NP_000157 (OMIM: 302800,304040) gap junction beta- ( 283) 850 206.5 4.5e-53
XP_016856532 (OMIM: 121012) PREDICTED: gap junctio ( 333) 477 119.6 7.9e-27
XP_005270807 (OMIM: 121012) PREDICTED: gap junctio ( 333) 477 119.6 7.9e-27
NP_002051 (OMIM: 121012) gap junction alpha-4 prot ( 333) 477 119.6 7.9e-27
NP_689343 (OMIM: 607425) gap junction delta-3 prot ( 294) 470 117.9 2.2e-26
XP_011507719 (OMIM: 116200,600897,612474) PREDICTE ( 427) 463 116.3 9.3e-26
XP_011507718 (OMIM: 116200,600897,612474) PREDICTE ( 433) 463 116.4 9.4e-26
NP_005258 (OMIM: 116200,600897,612474) gap junctio ( 433) 463 116.4 9.4e-26
NP_068773 (OMIM: 121015,601885) gap junction alpha ( 435) 443 111.7 2.4e-24
XP_011533350 (OMIM: 121015,601885) PREDICTED: gap ( 435) 443 111.7 2.4e-24
NP_000156 (OMIM: 104100,121014,133200,164200,18610 ( 382) 436 110.0 6.7e-24
NP_115991 (OMIM: 611924) gap junction alpha-10 pro ( 543) 431 108.9 2e-23
NP_853516 (OMIM: 611925) gap junction gamma-3 prot ( 279) 425 107.4 3e-23
XP_016856533 (OMIM: 108770,121013,612474,614049) P ( 358) 414 104.9 2.2e-22
NP_005257 (OMIM: 108770,121013,612474,614049) gap ( 358) 414 104.9 2.2e-22
NP_859054 (OMIM: 108770,121013,612474,614049) gap ( 358) 414 104.9 2.2e-22
XP_005273008 (OMIM: 108770,121013,612474,614049) P ( 358) 414 104.9 2.2e-22
NP_110399 (OMIM: 611923) gap junction alpha-9 prot ( 515) 412 104.5 4.1e-22
NP_065168 (OMIM: 608803,608804,613206,613480) gap ( 439) 357 91.6 2.6e-18
NP_001073852 (OMIM: 608655) gap junction gamma-1 p ( 396) 342 88.1 2.7e-17
XP_005256978 (OMIM: 608655) PREDICTED: gap junctio ( 396) 342 88.1 2.7e-17
XP_005256977 (OMIM: 608655) PREDICTED: gap junctio ( 396) 342 88.1 2.7e-17
NP_005488 (OMIM: 608655) gap junction gamma-1 prot ( 396) 342 88.1 2.7e-17
NP_065711 (OMIM: 607058) gap junction delta-2 prot ( 321) 338 87.1 4.4e-17
NP_699199 (OMIM: 611922) gap junction delta-4 prot ( 370) 266 70.4 5.6e-12
XP_016877927 (OMIM: 607058) PREDICTED: gap junctio ( 270) 205 56.1 8.2e-08
>>NP_001005752 (OMIM: 133200,220290,603324,612644) gap j (270 aa)
initn: 1908 init1: 1908 opt: 1908 Z-score: 2407.5 bits: 453.2 E(85289): 2.3e-127
Smith-Waterman score: 1908; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
190 200 210 220 230 240
250 260 270
pF1KB7 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
::::::::::::::::::::::::::::::
NP_001 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
250 260 270
>>NP_076872 (OMIM: 133200,220290,603324,612644) gap junc (270 aa)
initn: 1908 init1: 1908 opt: 1908 Z-score: 2407.5 bits: 453.2 E(85289): 2.3e-127
Smith-Waterman score: 1908; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
190 200 210 220 230 240
250 260 270
pF1KB7 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
::::::::::::::::::::::::::::::
NP_076 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
250 260 270
>>NP_694944 (OMIM: 133200,605425) gap junction beta-4 pr (266 aa)
initn: 1038 init1: 833 opt: 1085 Z-score: 1370.4 bits: 261.3 E(85289): 1.4e-69
Smith-Waterman score: 1085; 59.6% identity (81.1% similar) in 270 aa overlap (1-265:1-259)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
:.: ::.::::::::::...::::::::.:::::::::::.:: :::::: ::::::::
NP_694 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
:::::..::.:..::::::::.::::::::..::::::::::.:. ::: . .::::
NP_694 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYDNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
.::.::::::::.::::: .. :::..: :.. ..:::.: :. : :::. :::::.:
NP_694 SKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACS-VEPCPHTVDCYISR
130 140 150 160 170
190 200 210 220 230
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR--GLHKDKPRGG-CSPSSSASRAS
:::::.:::::: ..:.::.:.. :. ::. .: .. : .. .:: : :.
NP_694 PTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRECLPD-------
180 190 200 210 220 230
240 250 260 270
pF1KB7 TCRCHHKLVEAGEVDPDPGNNKLQ--ASAPNLTPI
:: . : ..:. :. ::. :. .:::
NP_694 TCP-PYVLSQGGH--PEDGNSVLMKAGSAPVDAGGYP
240 250 260
>>XP_011538981 (OMIM: 133200,605425) PREDICTED: gap junc (266 aa)
initn: 1038 init1: 833 opt: 1085 Z-score: 1370.4 bits: 261.3 E(85289): 1.4e-69
Smith-Waterman score: 1085; 59.6% identity (81.1% similar) in 270 aa overlap (1-265:1-259)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
:.: ::.::::::::::...::::::::.:::::::::::.:: :::::: ::::::::
XP_011 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
:::::..::.:..::::::::.::::::::..::::::::::.:. ::: . .::::
XP_011 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYDNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
.::.::::::::.::::: .. :::..: :.. ..:::.: :. : :::. :::::.:
XP_011 SKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACS-VEPCPHTVDCYISR
130 140 150 160 170
190 200 210 220 230
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLR--GLHKDKPRGG-CSPSSSASRAS
:::::.:::::: ..:.::.:.. :. ::. .: .. : .. .:: : :.
XP_011 PTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRECLPD-------
180 190 200 210 220 230
240 250 260 270
pF1KB7 TCRCHHKLVEAGEVDPDPGNNKLQ--ASAPNLTPI
:: . : ..:. :. ::. :. .:::
XP_011 TCP-PYVLSQGGH--PEDGNSVLMKAGSAPVDAGGYP
240 250 260
>>XP_005270808 (OMIM: 604493) PREDICTED: gap junction be (273 aa)
initn: 1016 init1: 800 opt: 1051 Z-score: 1327.4 bits: 253.4 E(85289): 3.4e-67
Smith-Waterman score: 1051; 57.1% identity (85.8% similar) in 240 aa overlap (1-240:1-239)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
:.:. ...::::::::::::::::::.::.::::::.:.:::::.:..:::::::.::::
XP_005 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
.:::.:..::.:..::::::::.::::::::..:::::: .:.:::. ::.. ..:: :
XP_005 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
:::.:::::::. ::.:: ... :::..:... . .: .:.: .. ::::::::.:..
XP_005 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKC-HADPCPNIVDCFISK
130 140 150 160 170
190 200 210 220 230 240
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
:.::.::: :::...:.::.:.. :: ::. .: . : : .. :. . .:.:.
XP_005 PSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCK
180 190 200 210 220 230
250 260 270
pF1KB7 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
XP_005 QDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
240 250 260 270
>>NP_005259 (OMIM: 604493) gap junction beta-5 protein [ (273 aa)
initn: 1016 init1: 800 opt: 1051 Z-score: 1327.4 bits: 253.4 E(85289): 3.4e-67
Smith-Waterman score: 1051; 57.1% identity (85.8% similar) in 240 aa overlap (1-240:1-239)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
:.:. ...::::::::::::::::::.::.::::::.:.:::::.:..:::::::.::::
NP_005 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
.:::.:..::.:..::::::::.::::::::..:::::: .:.:::. ::.. ..:: :
NP_005 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
:::.:::::::. ::.:: ... :::..:... . .: .:.: .. ::::::::.:..
NP_005 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKC-HADPCPNIVDCFISK
130 140 150 160 170
190 200 210 220 230 240
pF1KB7 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
:.::.::: :::...:.::.:.. :: ::. .: . : : .. :. . .:.:.
NP_005 PSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCK
180 190 200 210 220 230
250 260 270
pF1KB7 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
NP_005 QDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
240 250 260 270
>>XP_011533351 (OMIM: 121011,124500,148210,148350,149200 (226 aa)
initn: 886 init1: 538 opt: 884 Z-score: 1118.1 bits: 214.4 E(85289): 1.5e-55
Smith-Waterman score: 884; 54.6% identity (80.8% similar) in 229 aa overlap (1-223:1-225)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::: :::..:.::::.::..:.:::.:.:.::... ::::..:::::: :: ::: ::::
XP_011 MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
:::::.:::::.:::::::::::. :.::: .:::::.....:. : :. ... :
XP_011 KNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIK-GEIKSEFKDIE
70 80 90 100 110
130 140 150 160 170
pF1KB7 GKK------HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIV
: .:.::::: :..:..:.: :.:...... ::.: :::.: :. :::: :
XP_011 EIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKC-NAWPCPNTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 DCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSAS
::...::::: .:: ::...:..::.:.. :::::. : : : ::
XP_011 DCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLI-RYCSGKSK-KPV
180 190 200 210 220
240 250 260 270
pF1KB7 RASTCRCHHKLVEAGEVDPDPGNNKLQASAPNLTPI
>>NP_003995 (OMIM: 121011,124500,148210,148350,149200,22 (226 aa)
initn: 886 init1: 538 opt: 884 Z-score: 1118.1 bits: 214.4 E(85289): 1.5e-55
Smith-Waterman score: 884; 54.6% identity (80.8% similar) in 229 aa overlap (1-223:1-225)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::: :::..:.::::.::..:.:::.:.:.::... ::::..:::::: :: ::: ::::
NP_003 MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
:::::.:::::.:::::::::::. :.::: .:::::.....:. : :. ... :
NP_003 KNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIK-GEIKSEFKDIE
70 80 90 100 110
130 140 150 160 170
pF1KB7 GKK------HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIV
: .:.::::: :..:..:.: :.:...... ::.: :::.: :. :::: :
NP_003 EIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKC-NAWPCPNTV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 DCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSAS
::...::::: .:: ::...:..::.:.. :::::. : : : ::
NP_003 DCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLI-RYCSGKSK-KPV
180 190 200 210 220
240 250 260 270
pF1KB7 RASTCRCHHKLVEAGEVDPDPGNNKLQASAPNLTPI
>>XP_016875847 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 785 init1: 513 opt: 868 Z-score: 1097.0 bits: 210.7 E(85289): 2.3e-54
Smith-Waterman score: 868; 51.6% identity (82.4% similar) in 221 aa overlap (1-213:1-220)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::: ::.....::::.::..:..:..:.:.:::.. ::::..::::::.:: ::: ::::
XP_016 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAY-REERERRHRQKHGDQCAKLYDN
:::::..::.:.:::::::::::. :.::: .:::: :.: :. :. . . : ..
XP_016 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 AGKKH----GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD
:.. :.::::: :..:..:.: :.:... :..:...: ...:. . ::::.::
XP_016 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCG-IDPCPNLVD
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYL---ICHRVLRGLHKDKPRGGCSPSSS
:.:.::::: .:: ::..::..:..:.. ::::: .: :
XP_016 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES
180 190 200 210 220 230
240 250 260 270
pF1KB7 ASRASTCRCHHKLVEAGEVDPDPGNNKLQASAPNLTPI
XP_016 KQNEMNELISDSGQNAITGFPS
240 250 260
>>XP_016875848 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 785 init1: 513 opt: 868 Z-score: 1097.0 bits: 210.7 E(85289): 2.3e-54
Smith-Waterman score: 868; 51.6% identity (82.4% similar) in 221 aa overlap (1-213:1-220)
10 20 30 40 50 60
pF1KB7 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
::: ::.....::::.::..:..:..:.:.:::.. ::::..::::::.:: ::: ::::
XP_016 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAY-REERERRHRQKHGDQCAKLYDN
:::::..::.:.:::::::::::. :.::: .:::: :.: :. :. . . : ..
XP_016 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 AGKKH----GGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD
:.. :.::::: :..:..:.: :.:... :..:...: ...:. . ::::.::
XP_016 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCG-IDPCPNLVD
130 140 150 160 170
180 190 200 210 220 230
pF1KB7 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYL---ICHRVLRGLHKDKPRGGCSPSSS
:.:.::::: .:: ::..::..:..:.. ::::: .: :
XP_016 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES
180 190 200 210 220 230
240 250 260 270
pF1KB7 ASRASTCRCHHKLVEAGEVDPDPGNNKLQASAPNLTPI
XP_016 KQNEMNELISDSGQNAITGFPS
240 250 260
270 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:51:24 2016 done: Fri Nov 4 04:51:25 2016
Total Scan time: 6.970 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]