Result of FASTA (omim) for
pF1KB7114
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7114, 273 aa
1>>>pF1KB7114 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6925+/-0.000328; mu= 18.1695+/- 0.021
mean_var=60.3850+/-12.214, 0's: 0 Z-trim(116.0): 47 B-trim: 138 in 1/50
Lambda= 0.165048
statistics sampled from 26756 (26810) to 26756 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.314), width: 16
Scan time: 6.220
The best scores are: opt bits E(85289)
XP_005270808 (OMIM: 604493) PREDICTED: gap junctio ( 273) 1914 463.8 1.5e-130
NP_005259 (OMIM: 604493) gap junction beta-5 prote ( 273) 1914 463.8 1.5e-130
NP_694944 (OMIM: 133200,605425) gap junction beta- ( 266) 1113 273.1 3.8e-73
XP_011538981 (OMIM: 133200,605425) PREDICTED: gap ( 266) 1113 273.1 3.8e-73
NP_001005752 (OMIM: 133200,220290,603324,612644) g ( 270) 1051 258.3 1.1e-68
NP_076872 (OMIM: 133200,220290,603324,612644) gap ( 270) 1051 258.3 1.1e-68
NP_940970 (OMIM: 611921) gap junction beta-7 prote ( 223) 903 223.0 3.7e-58
XP_005248773 (OMIM: 611921) PREDICTED: gap junctio ( 223) 903 223.0 3.7e-58
NP_001103691 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
NP_001103689 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
XP_016875846 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
XP_016875849 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
XP_016875848 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
XP_016875847 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
NP_006774 (OMIM: 129500,220290,304400,604418,61264 ( 261) 863 213.6 3.1e-55
NP_001103690 (OMIM: 129500,220290,304400,604418,61 ( 261) 863 213.6 3.1e-55
XP_011529209 (OMIM: 302800,304040) PREDICTED: gap ( 283) 855 211.7 1.2e-54
NP_000157 (OMIM: 302800,304040) gap junction beta- ( 283) 855 211.7 1.2e-54
NP_001091111 (OMIM: 302800,304040) gap junction be ( 283) 855 211.7 1.2e-54
XP_016884897 (OMIM: 302800,304040) PREDICTED: gap ( 283) 855 211.7 1.2e-54
NP_003995 (OMIM: 121011,124500,148210,148350,14920 ( 226) 828 205.2 9e-53
XP_011533351 (OMIM: 121011,124500,148210,148350,14 ( 226) 828 205.2 9e-53
NP_689343 (OMIM: 607425) gap junction delta-3 prot ( 294) 445 114.1 3.1e-25
XP_011507719 (OMIM: 116200,600897,612474) PREDICTE ( 427) 442 113.5 6.8e-25
XP_011507718 (OMIM: 116200,600897,612474) PREDICTE ( 433) 442 113.5 6.9e-25
NP_005258 (OMIM: 116200,600897,612474) gap junctio ( 433) 442 113.5 6.9e-25
XP_016856532 (OMIM: 121012) PREDICTED: gap junctio ( 333) 425 109.4 9.3e-24
XP_005270807 (OMIM: 121012) PREDICTED: gap junctio ( 333) 425 109.4 9.3e-24
NP_002051 (OMIM: 121012) gap junction alpha-4 prot ( 333) 425 109.4 9.3e-24
XP_011533350 (OMIM: 121015,601885) PREDICTED: gap ( 435) 406 104.9 2.6e-22
NP_068773 (OMIM: 121015,601885) gap junction alpha ( 435) 406 104.9 2.6e-22
NP_853516 (OMIM: 611925) gap junction gamma-3 prot ( 279) 395 102.2 1.2e-21
NP_115991 (OMIM: 611924) gap junction alpha-10 pro ( 543) 398 103.1 1.2e-21
NP_005257 (OMIM: 108770,121013,612474,614049) gap ( 358) 392 101.5 2.3e-21
XP_005273008 (OMIM: 108770,121013,612474,614049) P ( 358) 392 101.5 2.3e-21
XP_016856533 (OMIM: 108770,121013,612474,614049) P ( 358) 392 101.5 2.3e-21
NP_859054 (OMIM: 108770,121013,612474,614049) gap ( 358) 392 101.5 2.3e-21
NP_000156 (OMIM: 104100,121014,133200,164200,18610 ( 382) 392 101.5 2.4e-21
NP_110399 (OMIM: 611923) gap junction alpha-9 prot ( 515) 376 97.8 4.3e-20
NP_065168 (OMIM: 608803,608804,613206,613480) gap ( 439) 358 93.5 7.3e-19
XP_005256977 (OMIM: 608655) PREDICTED: gap junctio ( 396) 343 89.9 8.1e-18
NP_005488 (OMIM: 608655) gap junction gamma-1 prot ( 396) 343 89.9 8.1e-18
NP_001073852 (OMIM: 608655) gap junction gamma-1 p ( 396) 343 89.9 8.1e-18
XP_005256978 (OMIM: 608655) PREDICTED: gap junctio ( 396) 343 89.9 8.1e-18
NP_065711 (OMIM: 607058) gap junction delta-2 prot ( 321) 331 87.0 5e-17
NP_699199 (OMIM: 611922) gap junction delta-4 prot ( 370) 272 73.0 9.4e-13
XP_016877927 (OMIM: 607058) PREDICTED: gap junctio ( 270) 206 57.1 4e-08
>>XP_005270808 (OMIM: 604493) PREDICTED: gap junction be (273 aa)
initn: 1914 init1: 1914 opt: 1914 Z-score: 2464.8 bits: 463.8 E(85289): 1.5e-130
Smith-Waterman score: 1914; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
190 200 210 220 230 240
250 260 270
pF1KB7 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
:::::::::::::::::::::::::::::::::
XP_005 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
250 260 270
>>NP_005259 (OMIM: 604493) gap junction beta-5 protein [ (273 aa)
initn: 1914 init1: 1914 opt: 1914 Z-score: 2464.8 bits: 463.8 E(85289): 1.5e-130
Smith-Waterman score: 1914; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
190 200 210 220 230 240
250 260 270
pF1KB7 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
:::::::::::::::::::::::::::::::::
NP_005 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
250 260 270
>>NP_694944 (OMIM: 133200,605425) gap junction beta-4 pr (266 aa)
initn: 1133 init1: 1113 opt: 1113 Z-score: 1434.2 bits: 273.1 E(85289): 3.8e-73
Smith-Waterman score: 1113; 67.7% identity (87.6% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:::....:::::::::::...:::::.:::::::::.:.::.::.:..::: :::.::::
NP_694 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
:::.:::::::::::::::::::::::::::::::::: .:..:. :: :. :: :
NP_694 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYDNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
.::::::::::. ::.:::.:: .:::.:: .: : .: :: : ..:::. :::.::.:
NP_694 SKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACSVEPCPHTVDCYISRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
.::..:: :::.:::::::::: :..:::.::: : .. :. . :
NP_694 TEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRECLPDTCPPYVLS
190 200 210 220 230 240
250 260 270
pF1KB7 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
NP_694 QGGHPEDGNSVLMKAGSAPVDAGGYP
250 260
>>XP_011538981 (OMIM: 133200,605425) PREDICTED: gap junc (266 aa)
initn: 1133 init1: 1113 opt: 1113 Z-score: 1434.2 bits: 273.1 E(85289): 3.8e-73
Smith-Waterman score: 1113; 67.7% identity (87.6% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:::....:::::::::::...:::::.:::::::::.:.::.::.:..::: :::.::::
XP_011 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
:::.:::::::::::::::::::::::::::::::::: .:..:. :: :. :: :
XP_011 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREERERKHHLKHGPNAPSLYDNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
.::::::::::. ::.:::.:: .:::.:: .: : .: :: : ..:::. :::.::.:
XP_011 SKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACSVEPCPHTVDCYISRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCKQ
.::..:: :::.:::::::::: :..:::.::: : .. :. . :
XP_011 TEKKVFTYFMVTTAAICILLNLSEVFYLVGKRCMEIFGPRHRRPRCRECLPDTCPPYVLS
190 200 210 220 230 240
250 260 270
pF1KB7 DDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
XP_011 QGGHPEDGNSVLMKAGSAPVDAGGYP
250 260
>>NP_001005752 (OMIM: 133200,220290,603324,612644) gap j (270 aa)
initn: 1016 init1: 800 opt: 1051 Z-score: 1354.3 bits: 258.3 E(85289): 1.1e-68
Smith-Waterman score: 1051; 57.1% identity (85.8% similar) in 240 aa overlap (1-239:1-240)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.:. ...::::::::::::::::::.::.::::::.:.:::::.:..:::::::.::::
NP_001 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
.:::.:..::.:..::::::::.::::::::..:::::: .:.:::. ::.. ..:: :
NP_001 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKC-HADPCPNIVDCFISK
:::.:::::::. ::.:: ... :::..:... . .: .:.: .. ::::::::.:..
NP_001 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 PSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCK
:.::.::: :::...:.::.:.. :: ::. .: . : : .. :. . .:.:.
NP_001 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
190 200 210 220 230 240
240 250 260 270
pF1KB7 QDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
NP_001 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
250 260 270
>>NP_076872 (OMIM: 133200,220290,603324,612644) gap junc (270 aa)
initn: 1016 init1: 800 opt: 1051 Z-score: 1354.3 bits: 258.3 E(85289): 1.1e-68
Smith-Waterman score: 1051; 57.1% identity (85.8% similar) in 240 aa overlap (1-239:1-240)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.:. ...::::::::::::::::::.::.::::::.:.:::::.:..:::::::.::::
NP_076 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
.:::.:..::.:..::::::::.::::::::..:::::: .:.:::. ::.. ..:: :
NP_076 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERERRHRQKHGDQCAKLYDNA
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKC-HADPCPNIVDCFISK
:::.:::::::. ::.:: ... :::..:... . .: .:.: .. ::::::::.:..
NP_076 GKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCYIAR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 PSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTTSSCK
:.::.::: :::...:.::.:.. :: ::. .: . : : .. :. . .:.:.
NP_076 PTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGLHKDKPRGGCSPSSSASRASTCR
190 200 210 220 230 240
240 250 260 270
pF1KB7 QDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
NP_076 CHHKLVEAGEVDPDPGNNKLQASAPNLTPI
250 260 270
>>NP_940970 (OMIM: 611921) gap junction beta-7 protein [ (223 aa)
initn: 883 init1: 528 opt: 903 Z-score: 1165.0 bits: 223.0 E(85289): 3.7e-58
Smith-Waterman score: 903; 55.2% identity (81.3% similar) in 230 aa overlap (1-225:1-221)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.: ... ::::::::::. : :::..::.::.:::.:.::.::.:..:.:.::.:::::
NP_940 MSWMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
.:::::.:::.:.:::::::::.:. ::::::.::::.: .:::::. .::..:
NP_940 KNVCFDDFFPISQVRLWALQLIMVSTPSLLVVLHVAYHEGREKRHRK-------KLYVSP
70 80 90 100 110
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
: ::::..:. ::. :.. .:.:: .:...: . .: ..:: :::: ::::::::
NP_940 GTMDGGLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKCDLKPCPNTVDCFISKP
120 130 140 150 160 170
190 200 210 220 230
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSK---RCHECLAA--RKAQAMCTGHHPHGTT
.::.:: ::.: :. .::.::..:: .:: : .: :: .: :..
NP_940 TEKTIFILFLVITSCLCIVLNFIELSFLVLKCFIKC--CLQKYLKKPQVLSV
180 190 200 210 220
240 250 260 270
pF1KB7 SSCKQDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
>>XP_005248773 (OMIM: 611921) PREDICTED: gap junction be (223 aa)
initn: 883 init1: 528 opt: 903 Z-score: 1165.0 bits: 223.0 E(85289): 3.7e-58
Smith-Waterman score: 903; 55.2% identity (81.3% similar) in 230 aa overlap (1-225:1-221)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.: ... ::::::::::. : :::..::.::.:::.:.::.::.:..:.:.::.:::::
XP_005 MSWMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNP
.:::::.:::.:.:::::::::.:. ::::::.::::.: .:::::. .::..:
XP_005 KNVCFDDFFPISQVRLWALQLIMVSTPSLLVVLHVAYHEGREKRHRK-------KLYVSP
70 80 90 100 110
130 140 150 160 170 180
pF1KB7 GKKRGGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISKP
: ::::..:. ::. :.. .:.:: .:...: . .: ..:: :::: ::::::::
XP_005 GTMDGGLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKCDLKPCPNTVDCFISKP
120 130 140 150 160 170
190 200 210 220 230
pF1KB7 SEKNIFTLFMVATAAICILLNLVELIYLVSK---RCHECLAA--RKAQAMCTGHHPHGTT
.::.:: ::.: :. .::.::..:: .:: : .: :: .: :..
XP_005 TEKTIFILFLVITSCLCIVLNFIELSFLVLKCFIKC--CLQKYLKKPQVLSV
180 190 200 210 220
240 250 260 270
pF1KB7 SSCKQDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
>>NP_001103691 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 851 init1: 470 opt: 863 Z-score: 1112.6 bits: 213.6 E(85289): 3.1e-55
Smith-Waterman score: 863; 46.8% identity (79.4% similar) in 248 aa overlap (1-243:1-244)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.:. .. ...::::.::..:..:....:::::.. .:.:..::.:...:: ::: ::::
NP_001 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAY-REVQEKRHREAHGENSGRLYLN
.:::.:.::::::.::::::::.:. :.:::.::::: :. .. :... .:. . .
NP_001 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 PGKKR----GGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDC
:.. :.:::::. :. :. . ::.:::. .: : :: :.:: :::::.:::
NP_001 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FISKPSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTT
:::.:.::..::.::.....::.:::..:: ::. : : . :. .:. .::. .
NP_001 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFR----RSKRAQTQKNHPNHAL
190 200 210 220 230
240 250 260 270
pF1KB7 SSCKQDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
. ::...
NP_001 KESKQNEMNELISDSGQNAITGFPS
240 250 260
>>NP_001103689 (OMIM: 129500,220290,304400,604418,612643 (261 aa)
initn: 851 init1: 470 opt: 863 Z-score: 1112.6 bits: 213.6 E(85289): 3.1e-55
Smith-Waterman score: 863; 46.8% identity (79.4% similar) in 248 aa overlap (1-243:1-244)
10 20 30 40 50 60
pF1KB7 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC
:.:. .. ...::::.::..:..:....:::::.. .:.:..::.:...:: ::: ::::
NP_001 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB7 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVAY-REVQEKRHREAHGENSGRLYLN
.:::.:.::::::.::::::::.:. :.:::.::::: :. .. :... .:. . .
NP_001 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 PGKKR----GGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDC
:.. :.:::::. :. :. . ::.:::. .: : :: :.:: :::::.:::
NP_001 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 FISKPSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTT
:::.:.::..::.::.....::.:::..:: ::. : : . :. .:. .::. .
NP_001 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFR----RSKRAQTQKNHPNHAL
190 200 210 220 230
240 250 260 270
pF1KB7 SSCKQDDLLSGDLIFLGSDSHPPLLPDRPRDHVKKTIL
. ::...
NP_001 KESKQNEMNELISDSGQNAITGFPS
240 250 260
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:52:00 2016 done: Fri Nov 4 04:52:01 2016
Total Scan time: 6.220 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]