Result of FASTA (omim) for
pF1KB7119
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7119, 287 aa
1>>>pF1KB7119 287 - 287 aa - 287 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5082+/-0.000442; mu= 9.9430+/- 0.027
mean_var=111.3401+/-22.399, 0's: 0 Z-trim(113.6): 76 B-trim: 100 in 1/49
Lambda= 0.121548
statistics sampled from 22899 (22975) to 22899 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.269), width: 16
Scan time: 7.050
The best scores are: opt bits E(85289)
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287) 1888 341.9 8.3e-94
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287) 1888 341.9 8.3e-94
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287) 1888 341.9 8.3e-94
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo ( 287) 1888 341.9 8.3e-94
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287) 1888 341.9 8.3e-94
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313) 1888 342.0 8.8e-94
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 565 109.9 5.6e-24
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo ( 288) 565 109.9 5.7e-24
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 546 106.6 5.7e-23
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 ( 319) 546 106.6 6.2e-23
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2 ( 277) 544 106.2 7.1e-23
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2 ( 309) 544 106.3 7.7e-23
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 542 105.9 9.3e-23
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2 ( 317) 542 105.9 1e-22
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 542 105.9 1e-22
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 542 105.9 1e-22
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2 ( 260) 511 100.4 3.7e-21
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 500 98.5 1.5e-20
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 472 93.6 4.5e-19
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 472 93.6 4.5e-19
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 ( 287) 472 93.6 4.6e-19
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3 ( 269) 462 91.8 1.5e-18
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 462 91.9 1.5e-18
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 462 91.9 1.5e-18
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 462 91.9 1.5e-18
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 462 91.9 1.5e-18
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 462 91.9 1.5e-18
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 462 91.9 1.6e-18
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 ( 289) 462 91.9 1.6e-18
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2 ( 213) 456 90.7 2.5e-18
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2 ( 214) 452 90.0 4.2e-18
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3 ( 192) 411 82.8 5.6e-16
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 ( 251) 408 82.4 9.9e-16
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329) 408 82.4 1.2e-15
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297) 393 79.8 7e-15
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4 ( 293) 373 76.3 7.9e-14
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295) 373 76.3 7.9e-14
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3 ( 244) 371 75.9 8.7e-14
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3 ( 252) 371 75.9 8.9e-14
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219) 348 71.8 1.3e-12
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3 ( 155) 320 66.8 3e-11
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4 ( 154) 280 59.8 3.8e-09
XP_016874475 (OMIM: 132350) PREDICTED: syntaxin-2 ( 200) 220 49.3 7e-06
XP_016874477 (OMIM: 132350) PREDICTED: syntaxin-2 ( 167) 213 48.0 1.4e-05
XP_016874476 (OMIM: 132350) PREDICTED: syntaxin-2 ( 199) 213 48.1 1.6e-05
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276) 183 42.9 0.00081
NP_001313509 (OMIM: 603217) syntaxin-7 isoform b [ ( 239) 164 39.6 0.0072
XP_011534480 (OMIM: 603217) PREDICTED: syntaxin-7 ( 239) 164 39.6 0.0072
>>XP_011534519 (OMIM: 603552,605014) PREDICTED: syntaxin (287 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1805.2 bits: 341.9 E(85289): 8.3e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
190 200 210 220 230 240
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
250 260 270 280
>>XP_011534520 (OMIM: 603552,605014) PREDICTED: syntaxin (287 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1805.2 bits: 341.9 E(85289): 8.3e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
190 200 210 220 230 240
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
250 260 270 280
>>XP_016866889 (OMIM: 603552,605014) PREDICTED: syntaxin (287 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1805.2 bits: 341.9 E(85289): 8.3e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
190 200 210 220 230 240
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
250 260 270 280
>>NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo sapi (287 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1805.2 bits: 341.9 E(85289): 8.3e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
190 200 210 220 230 240
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
250 260 270 280
>>XP_011534516 (OMIM: 603552,605014) PREDICTED: syntaxin (287 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1805.2 bits: 341.9 E(85289): 8.3e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
190 200 210 220 230 240
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
250 260 270 280
>>XP_011534515 (OMIM: 603552,605014) PREDICTED: syntaxin (313 aa)
initn: 1888 init1: 1888 opt: 1888 Z-score: 1804.6 bits: 342.0 E(85289): 8.8e-94
Smith-Waterman score: 1888; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:27-313)
10 20 30
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIV
::::::::::::::::::::::::::::::::::
XP_011 MEQPQGDEMDEGEEEEKKARSQPQSKMKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB7 FETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB7 ARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB7 DNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHREL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB7 LRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNP
250 260 270 280 290 300
280
pF1KB7 CRTLCCFCCPCLK
:::::::::::::
XP_011 CRTLCCFCCPCLK
310
>>XP_016878382 (OMIM: 601485,616172) PREDICTED: syntaxin (282 aa)
initn: 565 init1: 456 opt: 565 Z-score: 551.5 bits: 109.9 E(85289): 5.6e-24
Smith-Waterman score: 565; 34.5% identity (71.2% similar) in 267 aa overlap (21-286:7-268)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
:.::: . : : ::... .......:. . :
XP_016 MEPRAKDSDDEEEVVHVD----RDHFMDEFFEQVEEIRGCIEKLSE
10 20 30 40
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::... ::.. .:.. . :.. .... :: .. .. ::.:... : :. .
XP_016 DVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRS
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
:: :: ..:...:. : ..: .:: .. : :: :: :::::::: :. ......:::
XP_016 -SADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDM
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
.:.:: .:.... : . .. ::::::.:: :...::. ::..:..:..::.:::.:..
XP_016 LESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGE
170 180 190 200 210 220
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNP-CRTLCCFCCPCLK
.. :: ::...:::. .: ....:::.:. : . . .:: :
XP_016 MIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLG
230 240 250 260 270 280
XP_016 L
>>NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo sapi (288 aa)
initn: 588 init1: 456 opt: 565 Z-score: 551.3 bits: 109.9 E(85289): 5.7e-24
Smith-Waterman score: 573; 34.1% identity (69.0% similar) in 287 aa overlap (1-286:1-274)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
:::: :: .. :.::: . : : ::... .......:. . :
NP_443 MKDRTQEL--------RSAKDSDDEEEVVHVD----RDHFMDEFFEQVEEIRGCIEKLSE
10 20 30 40
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
::... ::.. .:.. . :.. .... :: .. .. ::.:... : :. .
NP_443 DVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRS
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB7 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
:: :: ..:...:. : ..: .:: .. : :: :: :::::::: :. ......:::
NP_443 -SADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDM
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB7 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
.:.:: .:.... : . .. ::::::.:: :...::. ::..:..:..::.:::.:..
NP_443 LESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGE
170 180 190 200 210 220
250 260 270 280
pF1KB7 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNP-CRTLCCFCCPCLK
.. :: ::...:::. .: ....:::.:. : . . .:: :
NP_443 MIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLG
230 240 250 260 270 280
NP_443 L
>>NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Homo sa (287 aa)
initn: 489 init1: 451 opt: 546 Z-score: 533.3 bits: 106.6 E(85289): 5.7e-23
Smith-Waterman score: 557; 33.5% identity (70.8% similar) in 284 aa overlap (1-283:1-270)
10 20 30 40 50 60
pF1KB7 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
:.::: .: :. ::: .: : ::...........:.. . ..
NP_001 MRDRLPDLTACRKN-----DDGDTV-------VVVEKDHFMDDFFHQVEEIRNSIDKITQ
10 20 30 40
70 80 90 100 110 120
pF1KB7 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
:... :... .:.. ..::.. ... : :: .. :. ::.:... . :. :
NP_001 YVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDES--GN
50 60 70 80 90 100
130 140 150 160 170
pF1KB7 HSAVA-RISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIED
...: :: :.:...:. : .:: .::.:. :. : :::::::: :. .. :..:.
NP_001 RTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB7 MFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQA
:.:.:: ..:. ....: . .: :::::::::.....::. ::..::.:..::..:: :.
NP_001 MLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQG
170 180 190 200 210 220
240 250 260 270 280
pF1KB7 DTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
. .: :: ::....::. .:: ...::..:. : . . . :
NP_001 EMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTL
230 240 250 260 270 280
NP_001 S
>>XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 isof (319 aa)
initn: 489 init1: 451 opt: 546 Z-score: 532.7 bits: 106.6 E(85289): 6.2e-23
Smith-Waterman score: 546; 34.1% identity (75.0% similar) in 252 aa overlap (33-283:53-302)
10 20 30 40 50 60
pF1KB7 DRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADV
.: : ::...........:.. . .. :
XP_016 VICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYV
30 40 50 60 70 80
70 80 90 100 110 120
pF1KB7 KRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHS
... :... .:.. ..::.. ... : :: .. :. ::.:... . :. : ..
XP_016 EEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDES--GNRT
90 100 110 120 130 140
130 140 150 160 170 180
pF1KB7 AVA-RISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMF
.: :: :.:...:. : .:: .::.:. :. : :::::::: :. .. :..:.:.
XP_016 SVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEML
150 160 170 180 190 200
190 200 210 220 230 240
pF1KB7 EQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADT
:.:: ..:. ....: . .: :::::::::.....::. ::..::.:..::..:: :..
XP_016 ESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEM
210 220 230 240 250 260
250 260 270 280
pF1KB7 LNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
.: :: ::....::. .:: ...::..:. : . . . :
XP_016 INNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTLS
270 280 290 300 310
287 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:54:52 2016 done: Fri Nov 4 04:54:53 2016
Total Scan time: 7.050 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]