Result of FASTA (ccds) for
pF1KB7170
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7170, 439 aa
1>>>pF1KB7170 439 - 439 aa - 439 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5998+/-0.000776; mu= 11.4452+/- 0.047
mean_var=207.2680+/-41.482, 0's: 0 Z-trim(116.2): 22 B-trim: 125 in 1/53
Lambda= 0.089086
statistics sampled from 16758 (16779) to 16758 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.515), width: 16
Scan time: 2.850
The best scores are: opt bits E(32554)
CCDS1569.1 GJC2 gene_id:57165|Hs108|chr1 ( 439) 3014 399.3 3.9e-111
CCDS11487.1 GJC1 gene_id:10052|Hs108|chr17 ( 396) 663 97.1 3.3e-20
CCDS9289.1 GJA3 gene_id:2700|Hs108|chr13 ( 435) 471 72.5 9.6e-13
CCDS5025.1 GJA10 gene_id:84694|Hs108|chr6 ( 543) 455 70.5 4.6e-12
CCDS30834.1 GJA8 gene_id:2703|Hs108|chr1 ( 433) 452 70.0 5.2e-12
CCDS30669.1 GJA4 gene_id:2701|Hs108|chr1 ( 333) 449 69.5 5.7e-12
CCDS929.1 GJA5 gene_id:2702|Hs108|chr1 ( 358) 446 69.2 7.8e-12
CCDS432.1 GJA9 gene_id:81025|Hs108|chr1 ( 515) 434 67.8 2.9e-11
CCDS10040.1 GJD2 gene_id:57369|Hs108|chr15 ( 321) 417 65.4 9.6e-11
>>CCDS1569.1 GJC2 gene_id:57165|Hs108|chr1 (439 aa)
initn: 3014 init1: 3014 opt: 3014 Z-score: 2108.6 bits: 399.3 E(32554): 3.9e-111
Smith-Waterman score: 3014; 100.0% identity (100.0% similar) in 439 aa overlap (1-439:1-439)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 PFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQALRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 RRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQALRD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 GAAAGDRDRDSSPCVGLPAASRGPPRAGAPASRTGSATSAGTVGEQGRPGTHERPGAKPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 GAAAGDRDRDSSPCVGLPAASRGPPRAGAPASRTGSATSAGTVGEQGRPGTHERPGAKPR
370 380 390 400 410 420
430
pF1KB7 AGSEKGSASSRDGKTTVWI
:::::::::::::::::::
CCDS15 AGSEKGSASSRDGKTTVWI
430
>>CCDS11487.1 GJC1 gene_id:10052|Hs108|chr17 (396 aa)
initn: 1211 init1: 631 opt: 663 Z-score: 476.2 bits: 97.1 E(32554): 3.3e-20
Smith-Waterman score: 1214; 47.1% identity (68.8% similar) in 442 aa overlap (4-439:1-396)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
::::::::::::::::::::::.:::::.::::::::::::.:: :::.::.:::.:
CCDS11 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQ
10 20 30 40 50
70 80 90 100 110
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQER-RRALRRRPG
:::.::::::::::::::::::::....::::::::::.:..:. . : ..: : .:
CCDS11 PGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PRRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACT
: . : . : . .::.::. : : :.
CCDS11 AMRWKQ------HRALEETEEDNEEDPMM---YPEMELESDK------------------
120 130 140 150
180 190 200 210 220 230
pF1KB7 KAVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEV
..: . : : .:::::::...:::..:: ::.::..:::.::.:::.::::.:
CCDS11 -----ENKEQSQPKP--KHDGRRRIREDGLMKIYVLQLLARTVFEVGFLIGQYFLYGFQV
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 RPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVR
.::. ::: :::: .:::.:::::::.:::.:: :. ::::::. :: :::.:. .:..
CCDS11 HPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTGLCLLLNIWEMLHLGFGTIRDSLN
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 GRRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQALR
..: :. : :.: :: :...:. . . .:.: . .
CCDS11 SKRRE-LEDPGAYNYPFTWNTPSA------PPGYNIAVKPDQ---IQYTELSNAKIAYKQ
270 280 290 300 310
360 370 380 390 400 410
pF1KB7 DGAAAGDRDRDSSPCVGLPAASRGPPRAGAPAS-RTGSATSAGTVGEQGRP-GTHERPG-
. : ...... .: .::: .. : :. : :..: . .:. : : .:. .
CCDS11 NKANTAQEQQYGSHEENLPADLEALQREIRMAQERLDLAVQAYS--HQNNPHGPREKKAK
320 330 340 350 360 370
420 430
pF1KB7 AKPRAGSEKGSASSR--DGKTTVWI
. .:::.:..:::. ::::.:::
CCDS11 VGSKAGSNKSTASSKSGDGKTSVWI
380 390
>>CCDS9289.1 GJA3 gene_id:2700|Hs108|chr13 (435 aa)
initn: 865 init1: 438 opt: 471 Z-score: 342.3 bits: 72.5 E(32554): 9.6e-13
Smith-Waterman score: 839; 36.4% identity (59.3% similar) in 450 aa overlap (6-433:4-384)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:::: ::::. ..::: .:::::::: .:::.. ....: ...:::. :::::.:
CCDS92 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
:::.::::: :.::.:::..::. .:::...:::...: ..: :....: ...
CCDS92 PGCENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLH-IVRMEEKKKERE-EEEQLK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
:..: . :: ...:
CCDS92 RESPSPKEPP------------QDNP----------------------------------
120 130
190 200 210 220 230
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREG-LMRVYVAQLVARAAFEVAFLVGQYLLYGFEV
...: : :.. : :.:.:: ... .. :::.:..:::.:::::.
CCDS92 ---------------SSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFEL
140 150 160 170
240 250 260 270 280 290
pF1KB7 RPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVR
.:.. :.: :::..::::.:::::::.:.. : .:.: ::::. :. ::: . ...:
CCDS92 KPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVT
180 190 200 210 220 230
300 310 320 330 340
pF1KB7 GRRGPPAS-APA----PAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARA-----HDQN
.: :: :: :: : : :: ::.: :. :: :. .. .:::
CCDS92 SRLGPDASEAPLGTADPPPLPPSSRPPAVAIGF--PPYYAHTAAPLGQARAVGYPGAPPP
240 250 260 270 280 290
350 360 370 380 390
pF1KB7 LANLALQALRDGAAAGDRDRDSSPCVGL---------PAASRGPPRAGA-PASRTGSATS
:.. : :: .. . :. . . : :: : :: : ::. : .: :
CCDS92 AADFKLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQPPALKAYPAASTPAAPS
300 310 320 330 340 350
400 410 420 430
pF1KB7 AGTVGEQGRPGTHE-RPGAKPRAGSEKGSASSRDGKTTVWI
:: .. : .:: . :: : . ::.:: .:
CCDS92 P--VGSSSPPLAHEAEAGAAPLLLD--GSGSSLEGSALAGTPEEEEQAVTTAAQMHQPPL
360 370 380 390 400
CCDS92 PLGDPGRASKASRASSGRARPEDLAI
410 420 430
>>CCDS5025.1 GJA10 gene_id:84694|Hs108|chr6 (543 aa)
initn: 786 init1: 420 opt: 455 Z-score: 330.0 bits: 70.5 E(32554): 4.6e-12
Smith-Waterman score: 713; 36.9% identity (64.1% similar) in 309 aa overlap (6-305:4-258)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:..: .:::.:.:::.:::.:::.: .::... :..: ...:::. :.:::::
CCDS50 MGDWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
:::.:.::: :.: .::::.::. .:.::..:.:.:..:: :: :..:.:
CCDS50 PGCNNICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRL-RAFEKDRQRK-------
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
. ::.. : : . .: : . ::... . : :
CCDS50 KSHLRAQMENPDLDLEEQQRIDRE-----LRRLEEQKRIHKVPLKG-----------C--
120 130 140 150
190 200 210 220 230 240
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEVR
:.:.:: ....:...::.:..:::.::::...
CCDS50 ----------------------------LLRTYVLHILTRSVLEVGFMIGQYILYGFQMH
160 170 180
250 260 270 280 290
pF1KB7 PFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGL---------
:.. :.. :::..::::::::::::.:.: :. .. . ::::. :. :::.
CCDS50 PLYKCTQPPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHLGIRKIMRTLYK
190 200 210 220 230 240
300 310 320 330 340 350
pF1KB7 GSAQDAVRGRRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLA
:...... . :::
CCDS50 KSSSEGIEDETGPPFHLKKYSVAQQCMICSSLPERISPLQANNQQQVIRVNVPKSKTMWQ
250 260 270 280 290 300
>>CCDS30834.1 GJA8 gene_id:2703|Hs108|chr1 (433 aa)
initn: 795 init1: 450 opt: 452 Z-score: 329.1 bits: 70.0 E(32554): 5.2e-12
Smith-Waterman score: 737; 33.6% identity (59.3% similar) in 425 aa overlap (6-428:4-353)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:::: .:::...::: .:.:::::: .:::.. ....: ...:::. :.:::.:
CCDS30 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
:::.::::: :.::.:.::.::. .::::.::.:.::: . : :... :
CCDS30 PGCENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYV-RMEEKRKSR--------
60 70 80 90 100
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
: :: : :.. .: ... .:
CCDS30 ----------------------------------EAEELGQQAGTN-----GGPDQGSVK
110 120 130
190 200 210 220 230
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREG-LMRVYVAQLVARAAFEVAFLVGQYLLYGFEV
:..:. : .... :: :.:.:. ... .. :::.:.::.:.::::..
CCDS30 ------KSSGSKGT-------KKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRI
140 150 160 170
240 250 260 270 280 290
pF1KB7 RPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVR
:.. ::: :::.:::::::::::::.:.: : :. . :.::. :..:::: . ..:..
CCDS30 LPLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKGIRSALK
180 190 200 210 220 230
300 310 320 330 340 350
pF1KB7 GRRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQALR
: :. : . : :.... :.:. :. .: :.....
CCDS30 -R---PVEQPL-GEIPEKSLHSIAVSSIQKAKGYQLL--EEEKIVSHYFPLTEVGMVETS
240 250 260 270 280 290
360 370 380 390 400 410
pF1KB7 DGAAAGDRDRDSSPCVG-LPAASRGPPRAGAPASRTGSATSAGTVGEQGRPGTHERPGAK
: . . . .: : ::: .. ...:. : .: :. . ::.
CCDS30 PLPAKPFNQFEEKISTGPLGDLSRGYQETLPSYAQVGAQEVEG----EGPPA---EEGAE
300 310 320 330 340
420 430
pF1KB7 PRAGSEKGSASSRDGKTTVWI
:..: .: :
CCDS30 PEVGEKKEEAERLTTEEQEKVAVPEGEKVETPGVDKEGEKEEPQSEKVSKQGLPAEKTPS
350 360 370 380 390 400
>>CCDS30669.1 GJA4 gene_id:2701|Hs108|chr1 (333 aa)
initn: 784 init1: 422 opt: 449 Z-score: 328.4 bits: 69.5 E(32554): 5.7e-12
Smith-Waterman score: 724; 35.7% identity (60.1% similar) in 401 aa overlap (6-399:4-328)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:.:: .::.....::: :::.::::: .:::.. ...::....:::. : ::: :
CCDS30 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
::: ::::: :.::.:.::.:.. .:::...:::.... :.: :.. ::.. :
CCDS30 PGCTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIY-LSR-----REERLRQKEGE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
:: :: ..:.. : :..:. .:
CCDS30 LRA----LPA-------------KDPQV-------------------ERALAAVERQMAK
120 130
190 200 210 220 230 240
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEVR
:. ::: :: : .:: .:::... ....:..:: ::. :::. ..
CCDS30 ISVAE-------------DGRLRI-RGALMGTYVASVLCKSVLEAGFLYGQWRLYGWTME
140 150 160 170 180
250 260 270 280 290 300
pF1KB7 PFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVRG
: : :.: :::..::::::::::::.:.. : ::. . :.::: :..:: . ..:.
CCDS30 PVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGMRA
190 200 210 220 230 240
310 320 330 340 350
pF1KB7 RRG---PPASAPAPAPRPPPCAF--PAAAAGLACP-PDYSLVVRAAERARAHDQNLANLA
:.: ::... . : : :.. . . : : :. . . .:: :::.
CCDS30 RQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGL-------SSSEQNWANLT
250 260 270 280 290
360 370 380 390 400 410
pF1KB7 LQALRDGAAAGDRDRDSSPCVGLPAASRGPPRAGA-PASRTGSATSAGTVGEQGRPGTHE
. .: .: : : ::. : : :: .:..:
CCDS30 TE---------ERLASSRP----PLFLDPPPQNGQKPPSRPSSSASKKQYV
300 310 320 330
420 430
pF1KB7 RPGAKPRAGSEKGSASSRDGKTTVWI
>>CCDS929.1 GJA5 gene_id:2702|Hs108|chr1 (358 aa)
initn: 715 init1: 433 opt: 446 Z-score: 326.0 bits: 69.2 E(32554): 7.8e-12
Smith-Waterman score: 684; 34.2% identity (57.5% similar) in 398 aa overlap (6-393:4-332)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:::: .:::.:.::: ::::::::: .::... ....:. ..:::: : :.: :
CCDS92 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
:::.::::: :.::.:.::.::. .::::..:.:.:.: . ::.:.
CCDS92 PGCQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTV---RMQEKRKL-------
60 70 80 90 100
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
:.: :: .: :. :. : :: .:
CCDS92 REAERA-----------------------------KEVRGS--GSYEYPVAEKAELSC--
110 120 130
190 200 210 220 230
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREG-LMRVYVAQLVARAAFEVAFLVGQYLLYGFEV
..: :: .: :. .:: ... :...::.:.::::..::. .
CCDS92 ----------------WEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFL
140 150 160 170
240 250 260 270 280 290
pF1KB7 RPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVR
. : :.:::: :.:.:::::::.::.. : .:. : :::.: :. ::: .:
CCDS92 TTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLG----WKKIR
180 190 200 210 220 230
300 310 320 330 340 350
pF1KB7 GRRGPPASAPAPAPRPPPCAFPAAAAGL--AC--PPDYSLVVRAAERARAHDQNLANLAL
: : . : : . . ..:. .: :::.. .. . .. . :.:
CCDS92 QRFVKPRQHMAK------CQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMAS
240 250 260 270 280
360 370 380 390 400 410
pF1KB7 QALRDGAAAGD-RDRDSSPCVGLPAASRG--P--PRAGAPASRTGSATSAGTVGEQGRPG
: :. .. . : ....: :. . : : : . .:. :
CCDS92 QQNTDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASS
290 300 310 320 330 340
420 430
pF1KB7 THERPGAKPRAGSEKGSASSRDGKTTVWI
CCDS92 KARSDDLSV
350
>>CCDS432.1 GJA9 gene_id:81025|Hs108|chr1 (515 aa)
initn: 743 init1: 404 opt: 434 Z-score: 315.7 bits: 67.8 E(32554): 2.9e-11
Smith-Waterman score: 667; 32.9% identity (60.6% similar) in 368 aa overlap (6-366:4-317)
10 20 30 40 50 60
pF1KB7 MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQ
:..: :::.: :::..::.:::.: .::... .:..: ...:::. : :::.:
CCDS43 MGDWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 PGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP
::: ::::: :.: .:.::.:.. .:.::..:.:.:..:: :. :.::.:
CCDS43 PGCRNVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRL-RVLEEERQRM-------
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 RRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAEGAGEEAEEAGAEEACTK
.:.: ..: : : . ... :.: : .. .:
CCDS43 ----KAQLR---------VELEEVEFEMPRDRRRLEQELCQLE-----------KRKLNK
120 130 140
190 200 210 220 230 240
pF1KB7 AVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARAAFEVAFLVGQYLLYGFEVR
: : : :. .:: .. .:.. ::.:..::::::::...
CCDS43 A------------PL----------RGTLLCTYVIHIFTRSVVEVGFMIGQYLLYGFHLE
150 160 170 180
250 260 270 280 290 300
pF1KB7 PFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVRG
:.: : .:::...:::::::::::.::: : .. . :.::. :. :::. . . .. :
CCDS43 PLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKRGLWG
190 200 210 220 230 240
310 320 330 340 350
pF1KB7 R---RGPPASAPAPAPRPPPCAFPAAAAG----LACPPDYSLVVRAAERARAHDQNLANL
. . : . . ...:. : :::.:.:. .. .. . ..
CCDS43 KYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLPSAPDYNLLVEKQTHTAVYPSLNSSS
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB7 ALQALRDGAAAGDRDRDSSPCVGLPAASRGPPRAGAPASRTGSATSAGTVGEQGRPGTHE
..: :. ...:
CCDS43 VFQPNPDNHSVNDEKCILDEQETVLSNEISTLSTSCSHFQHISSNNNKDTHKIFGKELNG
310 320 330 340 350 360
>>CCDS10040.1 GJD2 gene_id:57369|Hs108|chr15 (321 aa)
initn: 753 init1: 379 opt: 417 Z-score: 306.4 bits: 65.4 E(32554): 9.6e-11
Smith-Waterman score: 772; 42.1% identity (70.6% similar) in 299 aa overlap (6-300:4-286)
10 20 30 40 50
pF1KB7 MTNMSWSFLTRLLEE-IHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTR
:..: :::: ...:::..:.. :::.:.:::...:. ::..:.:::. :.:::
CCDS10 MGEWTILERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTL
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 QPGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPG
::::...::: :.::.:.:::::... :::. .. :.::. :. ..::: .
CCDS10 QPGCNQACYDRAFPISHIRYWVFQIIMVCTPSLCFITYSVHQSAK--QRERRYSTVFLAL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 PRRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGA-AEGAGEEAEEAGAEEAC
: :: : : . : : :..:... .: ..:. ...:... :
CCDS10 DRD------PPESIGGPGGTGGGGS----GGGKREDKKLQNAIVNGVLQNTENTSKE---
120 130 140 150 160
180 190 200 210 220 230
pF1KB7 TKAVGADGKAAGTPGPTGQHDGRR-RIQR-EGLMRVYVAQLVARAAFEVAFLVGQYLLYG
:. . : :: :.: . . . ...: ::. : :. :.: : :.:..::::::.:::
CCDS10 TEPDCLEVKEL-TPHPSGLRTASKSKLRRQEGISRFYIIQVVFRNALEIGFLVGQYFLYG
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB7 FEVRPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQD
: : .. :.: :: . :.:.:::::::::::. :..:: .:..::: :. ::: . .
CCDS10 FSVPGLYECNRYPCIKEVECYVSRPTEKTVFLVFMFAVSGICVVLNLAELNHLGWRKIKL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB7 AVRGRRGPPASAPAPAPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQ
::::
CCDS10 AVRGAQAKRKSIYEIRNKDLPRVSVPNFGRTQSSDSAYV
290 300 310 320
439 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:55:09 2016 done: Mon Nov 7 19:55:09 2016
Total Scan time: 2.850 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]