Result of FASTA (omim) for
pF1KB7227
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7227, 220 aa
1>>>pF1KB7227 220 - 220 aa - 220 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2845+/-0.000385; mu= 14.1081+/- 0.024
mean_var=64.6889+/-13.108, 0's: 0 Z-trim(112.5): 49 B-trim: 516 in 1/55
Lambda= 0.159463
statistics sampled from 21413 (21462) to 21413 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.252), width: 16
Scan time: 5.700
The best scores are: opt bits E(85289)
XP_011524123 (OMIM: 607051) PREDICTED: stAR-relate ( 220) 1477 348.4 5.5e-96
NP_631910 (OMIM: 607051) stAR-related lipid transf ( 220) 1477 348.4 5.5e-96
XP_016881043 (OMIM: 607051) PREDICTED: stAR-relate ( 138) 943 225.4 3.6e-59
XP_016881042 (OMIM: 607051) PREDICTED: stAR-relate ( 161) 901 215.8 3.3e-56
XP_016881041 (OMIM: 607051) PREDICTED: stAR-relate ( 161) 901 215.8 3.3e-56
NP_871629 (OMIM: 607050) stAR-related lipid transf ( 213) 483 119.7 3.7e-27
NP_631903 (OMIM: 607049) stAR-related lipid transf ( 205) 379 95.8 5.7e-20
NP_001294985 (OMIM: 607049) stAR-related lipid tra ( 205) 379 95.8 5.7e-20
XP_016878128 (OMIM: 607050) PREDICTED: stAR-relate ( 192) 378 95.5 6.4e-20
XP_006721709 (OMIM: 607048) PREDICTED: stAR-relate ( 412) 281 73.4 6.3e-13
NP_001159410 (OMIM: 607048) stAR-related lipid tra ( 427) 281 73.4 6.5e-13
NP_006795 (OMIM: 607048) stAR-related lipid transf ( 445) 281 73.4 6.8e-13
XP_016879530 (OMIM: 607048) PREDICTED: stAR-relate ( 445) 281 73.4 6.8e-13
NP_001159409 (OMIM: 607048) stAR-related lipid tra ( 445) 281 73.4 6.8e-13
NP_000340 (OMIM: 201710,600617) steroidogenic acut ( 285) 275 71.9 1.2e-12
XP_016864532 (OMIM: 607049) PREDICTED: stAR-relate ( 107) 255 67.1 1.3e-11
XP_016864530 (OMIM: 607049) PREDICTED: stAR-relate ( 107) 255 67.1 1.3e-11
NP_001294989 (OMIM: 607049) stAR-related lipid tra ( 107) 255 67.1 1.3e-11
XP_016864531 (OMIM: 607049) PREDICTED: stAR-relate ( 107) 255 67.1 1.3e-11
XP_016864533 (OMIM: 607049) PREDICTED: stAR-relate ( 123) 255 67.1 1.4e-11
NP_001294990 (OMIM: 607049) stAR-related lipid tra ( 123) 255 67.1 1.4e-11
NP_001294988 (OMIM: 607049) stAR-related lipid tra ( 123) 255 67.1 1.4e-11
XP_011522515 (OMIM: 607048) PREDICTED: stAR-relate ( 468) 243 64.7 3e-10
XP_011522512 (OMIM: 607048) PREDICTED: stAR-relate ( 501) 243 64.7 3.2e-10
XP_011522513 (OMIM: 607048) PREDICTED: stAR-relate ( 501) 243 64.7 3.2e-10
XP_006716455 (OMIM: 201710,600617) PREDICTED: ster ( 288) 191 52.6 8e-07
NP_001294987 (OMIM: 607049) stAR-related lipid tra ( 159) 187 51.5 9.2e-07
NP_001294986 (OMIM: 607049) stAR-related lipid tra ( 159) 187 51.5 9.2e-07
XP_016864537 (OMIM: 614315) PREDICTED: acyl-coenzy ( 361) 149 43.0 0.00078
XP_016864536 (OMIM: 614315) PREDICTED: acyl-coenzy ( 532) 149 43.1 0.0011
NP_570123 (OMIM: 614315) acyl-coenzyme A thioester ( 555) 149 43.1 0.0011
XP_016864534 (OMIM: 614315) PREDICTED: acyl-coenzy ( 566) 149 43.1 0.0011
NP_671517 (OMIM: 606803) acyl-coenzyme A thioester ( 594) 149 43.1 0.0012
NP_056362 (OMIM: 606803) acyl-coenzyme A thioester ( 607) 147 42.6 0.0017
>>XP_011524123 (OMIM: 607051) PREDICTED: stAR-related li (220 aa)
initn: 1477 init1: 1477 opt: 1477 Z-score: 1844.2 bits: 348.4 E(85289): 5.5e-96
Smith-Waterman score: 1477; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220)
10 20 30 40 50 60
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
130 140 150 160 170 180
190 200 210 220
pF1KB7 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
::::::::::::::::::::::::::::::::::::::::
XP_011 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
190 200 210 220
>>NP_631910 (OMIM: 607051) stAR-related lipid transfer p (220 aa)
initn: 1477 init1: 1477 opt: 1477 Z-score: 1844.2 bits: 348.4 E(85289): 5.5e-96
Smith-Waterman score: 1477; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220)
10 20 30 40 50 60
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
130 140 150 160 170 180
190 200 210 220
pF1KB7 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
::::::::::::::::::::::::::::::::::::::::
NP_631 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
190 200 210 220
>>XP_016881043 (OMIM: 607051) PREDICTED: stAR-related li (138 aa)
initn: 943 init1: 943 opt: 943 Z-score: 1183.3 bits: 225.4 E(85289): 3.6e-59
Smith-Waterman score: 943; 100.0% identity (100.0% similar) in 138 aa overlap (83-220:1-138)
60 70 80 90 100 110
pF1KB7 IIPESPAKLSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFI
::::::::::::::::::::::::::::::
XP_016 MVHRIDSDTFICHTITQSFAVGSISPRDFI
10 20 30
120 130 140 150 160 170
pF1KB7 DLVYIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLVYIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQ
40 50 60 70 80 90
180 190 200 210 220
pF1KB7 TEMRGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEMRGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
100 110 120 130
>>XP_016881042 (OMIM: 607051) PREDICTED: stAR-related li (161 aa)
initn: 901 init1: 901 opt: 901 Z-score: 1130.1 bits: 215.8 E(85289): 3.3e-56
Smith-Waterman score: 962; 73.2% identity (73.2% similar) in 220 aa overlap (1-220:1-161)
10 20 30 40 50 60
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
::::::::::::::::::::::::::::::
XP_016 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTS------------------------------
10 20 30
70 80 90 100 110 120
pF1KB7 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
:::::::::::::::::::::::::::::::
XP_016 -----------------------------DTFICHTITQSFAVGSISPRDFIDLVYIKRY
40 50 60
130 140 150 160 170 180
pF1KB7 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
70 80 90 100 110 120
190 200 210 220
pF1KB7 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
::::::::::::::::::::::::::::::::::::::::
XP_016 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
130 140 150 160
>>XP_016881041 (OMIM: 607051) PREDICTED: stAR-related li (161 aa)
initn: 901 init1: 901 opt: 901 Z-score: 1130.1 bits: 215.8 E(85289): 3.3e-56
Smith-Waterman score: 962; 73.2% identity (73.2% similar) in 220 aa overlap (1-220:1-161)
10 20 30 40 50 60
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAK
::::::::::::::::::::::::::::::
XP_016 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTS------------------------------
10 20 30
70 80 90 100 110 120
pF1KB7 LSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRY
:::::::::::::::::::::::::::::::
XP_016 -----------------------------DTFICHTITQSFAVGSISPRDFIDLVYIKRY
40 50 60
130 140 150 160 170 180
pF1KB7 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLS
70 80 90 100 110 120
190 200 210 220
pF1KB7 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
::::::::::::::::::::::::::::::::::::::::
XP_016 PSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
130 140 150 160
>>NP_871629 (OMIM: 607050) stAR-related lipid transfer p (213 aa)
initn: 475 init1: 336 opt: 483 Z-score: 608.5 bits: 119.7 E(85289): 3.7e-27
Smith-Waterman score: 483; 34.4% identity (65.1% similar) in 209 aa overlap (1-204:1-209)
10 20 30 40 50
pF1KB7 MDFKAIAQQT---AQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPES
:: ::.. :...: : :::.:::. . .. ..:: . : .: ::::: :::. .
NP_871 MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 PAKLSDFLYQT--GDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLV
.. : . . : :. ::... ..... : . . .: : : :. ::::::.:::
NP_871 LEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 YIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEM
.:::: . .. :. : ::. ...::.::::: : :. .:. ..:: : .:..
NP_871 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDL
130 140 150 160 170 180
180 190 200 210 220
pF1KB7 RGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
: : ..... .: ... : : . ..:
NP_871 SGYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE
190 200 210
>>NP_631903 (OMIM: 607049) stAR-related lipid transfer p (205 aa)
initn: 324 init1: 203 opt: 379 Z-score: 479.5 bits: 95.8 E(85289): 5.7e-20
Smith-Waterman score: 379; 29.7% identity (63.6% similar) in 195 aa overlap (2-195:6-197)
10 20 30 40 50
pF1KB7 MDFKAIAQQTAQEVLGYNR-DTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIP
: ..: . . .. :. . . :.:.: .: .:: : :..:.: ::...:.:
NP_631 MEGLSDVASFATKLKNTLIQYHSIEEDKWRVAKKTKDVTVWRKPSEEFNGYLYKAQGVID
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ESPAKLSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLV
. .. : . :. ::. . .... .. . . . : . . ::::.:.:.
NP_631 DLVYSIIDHIRPGPCRLDWDSLMTSLDILENFEENCCVMRYTTAGQLWNIISPREFVDFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 YIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEM
: :. .. . . :.:. : : ...::::::::. : :...:: : :. ..::..
NP_631 YTVGYKEGL-LSCGISLDWDEKRP--EFVRGYNHPCGWFCVPLKDNPNQSLLTGYIQTDL
130 140 150 160 170
180 190 200 210 220
pF1KB7 RGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
:: . : .. .: :.:.::
NP_631 RGMIPQSAVDTAMASTLTNFYGDLRKAL
180 190 200
>>NP_001294985 (OMIM: 607049) stAR-related lipid transfe (205 aa)
initn: 324 init1: 203 opt: 379 Z-score: 479.5 bits: 95.8 E(85289): 5.7e-20
Smith-Waterman score: 379; 29.7% identity (63.6% similar) in 195 aa overlap (2-195:6-197)
10 20 30 40 50
pF1KB7 MDFKAIAQQTAQEVLGYNR-DTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIP
: ..: . . .. :. . . :.:.: .: .:: : :..:.: ::...:.:
NP_001 MEGLSDVASFATKLKNTLIQYHSIEEDKWRVAKKTKDVTVWRKPSEEFNGYLYKAQGVID
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 ESPAKLSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLV
. .. : . :. ::. . .... .. . . . : . . ::::.:.:.
NP_001 DLVYSIIDHIRPGPCRLDWDSLMTSLDILENFEENCCVMRYTTAGQLWNIISPREFVDFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 YIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEM
: :. .. . . :.:. : : ...::::::::. : :...:: : :. ..::..
NP_001 YTVGYKEGL-LSCGISLDWDEKRP--EFVRGYNHPCGWFCVPLKDNPNQSLLTGYIQTDL
130 140 150 160 170
180 190 200 210 220
pF1KB7 RGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
:: . : .. .: :.:.::
NP_001 RGMIPQSAVDTAMASTLTNFYGDLRKAL
180 190 200
>>XP_016878128 (OMIM: 607050) PREDICTED: stAR-related li (192 aa)
initn: 358 init1: 336 opt: 378 Z-score: 478.7 bits: 95.5 E(85289): 6.4e-20
Smith-Waterman score: 378; 31.7% identity (63.9% similar) in 183 aa overlap (26-204:6-188)
10 20 30 40 50
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKIT--VSSKASRKFHGNLYRVEGIIPESP
:.. . ::: ... .: .: . :: :::. .
XP_016 MVHLLVLRYNLKITSLIDALGSNSFSCSRYRGEGIVYGTL
10 20 30 40
60 70 80 90 100 110
pF1KB7 AKLSDFLYQT--GDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVY
.. : . . : :. ::... ..... : . . .: : : :. ::::::.:::
XP_016 EEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVL
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 IKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMR
.:::: . .. :. : ::. ...::.::::: : :. .:. ..:: : .:..
XP_016 VKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLS
110 120 130 140 150 160
180 190 200 210 220
pF1KB7 GKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
: : ..... .: ... : : . ..:
XP_016 GYLPQNVVDSFFPRSMTRFYANLQKAVKQFHE
170 180 190
>>XP_006721709 (OMIM: 607048) PREDICTED: stAR-related li (412 aa)
initn: 183 init1: 86 opt: 281 Z-score: 353.0 bits: 73.4 E(85289): 6.3e-13
Smith-Waterman score: 281; 24.2% identity (62.1% similar) in 182 aa overlap (24-203:226-405)
10 20 30 40 50
pF1KB7 MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGI
:: :... . :::. . .. .
XP_006 KSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTF
200 210 220 230 240 250
60 70 80 90 100 110
pF1KB7 IPESPAKL--SDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDF
.: ::.: .. . : . :.:.. . ....:....:.: . .. . : : .:::::
XP_006 LP-CPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDF
260 270 280 290 300 310
120 130 140 150 160 170
pF1KB7 IDLVYIKRYEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFV
... :.: . . . :. ... ::. .:.:: : : ::. :: .: ..
XP_006 VNVRRIERRRDRY-LSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWIL
320 330 340 350 360 370
180 190 200 210 220
pF1KB7 QTEMRGKLSPSIIEKTMPSNLVNFILNAKDGIKAHRTPSRRGFHHNSHS
.:...:.: .:.... ... .: .. .. :
XP_006 NTDLKGRLPRYLIHQSLAATMFEFAFHLRQRISELGARA
380 390 400 410
220 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:44:01 2016 done: Sat Nov 5 09:44:02 2016
Total Scan time: 5.700 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]