Result of FASTA (omim) for
pF1KB7244
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7244, 364 aa
1>>>pF1KB7244 364 - 364 aa - 364 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9581+/-0.000345; mu= 19.3980+/- 0.022
mean_var=92.6812+/-21.207, 0's: 0 Z-trim(116.7): 790 B-trim: 2518 in 2/49
Lambda= 0.133223
statistics sampled from 27250 (28147) to 27250 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.33), width: 16
Scan time: 8.460
The best scores are: opt bits E(85289)
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 2421 475.4 8.7e-134
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 2421 475.4 8.7e-134
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 1322 264.3 3.7e-70
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 1322 264.3 3.7e-70
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 1322 264.3 3.7e-70
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 1322 264.3 3.7e-70
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 1322 264.3 3.7e-70
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 1322 264.3 3.7e-70
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 1322 264.3 3.7e-70
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 1289 257.9 2.7e-68
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 1146 230.4 5.3e-60
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 1087 219.1 1.4e-56
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 821 167.9 3.1e-41
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 817 167.2 5.8e-41
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 817 167.2 5.8e-41
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 817 167.2 5.9e-41
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 817 167.2 5.9e-41
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 817 167.2 5.9e-41
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 817 167.2 5.9e-41
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 817 167.2 6e-41
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 817 167.2 6.1e-41
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 817 167.2 6.1e-41
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 817 167.2 6.3e-41
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 817 167.3 6.8e-41
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 817 167.3 6.8e-41
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 796 163.1 9.2e-40
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 789 161.8 2.3e-39
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 789 161.8 2.3e-39
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 789 161.8 2.3e-39
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 789 161.8 2.3e-39
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 789 161.8 2.4e-39
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 789 161.8 2.4e-39
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 789 161.8 2.4e-39
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 789 161.8 2.5e-39
NP_001305783 (OMIM: 602548) nociceptin receptor is ( 365) 775 159.1 1.5e-38
XP_016883344 (OMIM: 602548) PREDICTED: nociceptin ( 365) 775 159.1 1.5e-38
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 746 153.5 7.3e-37
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 746 153.5 7.7e-37
NP_005276 (OMIM: 600730) neuropeptides B/W recepto ( 328) 740 152.3 1.5e-36
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 716 147.7 3.5e-35
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 699 144.3 3.2e-34
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 699 144.4 3.3e-34
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 699 144.4 3.3e-34
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 699 144.4 3.3e-34
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 699 144.4 3.3e-34
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 699 144.4 3.4e-34
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 699 144.4 3.6e-34
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 699 144.4 3.6e-34
XP_016866393 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 699 144.4 3.6e-34
XP_011534155 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 699 144.4 3.6e-34
>>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 2522.9 bits: 475.4 E(85289): 8.7e-134
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KB7 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QEGGTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEGGTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANSCAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANSCAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQ
310 320 330 340 350 360
pF1KB7 TSKL
::::
NP_001 TSKL
>>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa)
initn: 2421 init1: 2421 opt: 2421 Z-score: 2522.9 bits: 475.4 E(85289): 8.7e-134
Smith-Waterman score: 2421; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KB7 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 VIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 VNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QEGGTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEGGTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 RSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANSCAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANSCAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQ
310 320 330 340 350 360
pF1KB7 TSKL
::::
NP_001 TSKL
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
XP_016 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
XP_016 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
XP_016 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
XP_016 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
XP_016 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
XP_016 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
XP_016 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>XP_016884412 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
XP_016 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
XP_016 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
XP_016 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
XP_016 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
XP_016 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
XP_016 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
XP_016 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
XP_011 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
XP_011 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
XP_011 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
XP_011 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
XP_011 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
XP_011 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
XP_011 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>NP_001265616 (OMIM: 182453) somatostatin receptor type (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
NP_001 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
NP_001 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
NP_001 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
NP_001 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
NP_001 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
NP_001 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
NP_001 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>XP_006724374 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
XP_006 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
XP_006 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
XP_006 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
XP_006 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
XP_006 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
XP_006 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
XP_006 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
XP_005 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
XP_005 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
XP_005 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
XP_005 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
XP_005 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
XP_005 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
XP_005 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>NP_001042 (OMIM: 182453) somatostatin receptor type 3 (418 aa)
initn: 1018 init1: 656 opt: 1322 Z-score: 1380.6 bits: 264.3 E(85289): 3.7e-70
Smith-Waterman score: 1322; 56.5% identity (79.6% similar) in 368 aa overlap (1-357:1-365)
10 20 30 40 50
pF1KB7 MEPLFPASTPSWNASSP-GAASGGGDNRTL----VGPAPSAGA-RAVLVPVLYLLVCAAG
:. : :.:. . .: : .:.:. . :: .::.:.. : .::.:..::.::..:
NP_001 MDMLHPSSVST--TSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 LGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRL
: ::.:::::::: . .:::.::::::.:: :.::::::::.::: :.:::: ..:::
NP_001 LLGNSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 VMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPL
::..::.:::::.::::::::::::::::: ::::: ::. .:::.:: : . ::.
NP_001 VMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB7 LVFADVQEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGV
.::. : .: .::. .::::.. : : ::::::.::::.:::::::::::::::::.::
NP_001 VVFSGVPRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
180 190 200 210 220 230
240 250 260 270 280
pF1KB7 RV---GCVRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFV
:: .: ::: :::.:::::..:: .:. ::.::...::::.. ::.::: ::::.:
NP_001 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB7 VILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPP
: : ::::::::.:::::: :.:.:..:: :: . ... . : :.. ....:
NP_001 VALPYANSCANPILYGFLSYRFKQGFRRVL-LRPSRRVRSQEPTVGPPEKTEEEDEEEED
300 310 320 330 340 350
350 360
pF1KB7 AHRAAANGLMQTSKL
.... .:
NP_001 GEESREGGKGKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISY
360 370 380 390 400 410
>>NP_001041 (OMIM: 182452) somatostatin receptor type 2 (369 aa)
initn: 1253 init1: 654 opt: 1289 Z-score: 1347.0 bits: 257.9 E(85289): 2.7e-68
Smith-Waterman score: 1289; 55.7% identity (79.8% similar) in 336 aa overlap (32-362:36-368)
10 20 30 40 50 60
pF1KB7 EPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLV
: . . :::. .:..:: :: :::::
NP_001 EPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLT-FIYFVVCIIGLCGNTLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 IYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGV
:::.::.:::::.:::::::::.:: :.:::::::: : : :::: ..::.:::.::.
NP_001 IYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 NQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADV-
:::::.:::::::.:::::::::..::.:::::.::. . :.: .:: . ::....: .
NP_001 NQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLR
130 140 150 160 170 180
190 200 210 220 230
pF1KB7 --QEG-GTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGC
: : ..:. .:: : : . ::::: .:::..:: .::::::.:..::...:.:::
NP_001 SNQWGRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGS
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 VRRR-SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYAN
.:. ::.:::::: .:: :: :::::. :. ....:. :: :.. :::.:.:::
NP_001 SKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYAN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 SCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAAN
:::::.::.::::::..:::.:::: : ::. :.. .. . :. : .. : ..:. :
NP_001 SCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNE--TTETQRTLLN
310 320 330 340 350 360
360
pF1KB7 GLMQTSKL
: .:::
NP_001 GDLQTSI
364 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 09:46:03 2016 done: Sat Nov 5 09:46:04 2016
Total Scan time: 8.460 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]