FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7253, 419 aa
  1>>>pF1KB7253     419 - 419 aa - 419 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.0243+/-0.000908; mu= -3.4570+/- 0.055
 mean_var=259.9831+/-52.560, 0's: 0 Z-trim(115.1): 19  B-trim: 169 in 2/51
 Lambda= 0.079543
 statistics sampled from 15895 (15910) to 15895 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.476), width:  16
 Scan time:  1.560

The best scores are:                                      opt bits E(33420)
CCDS10155.1 PYGO1 gene_id:26108|Hs109|chr15        ( 419) 2981 354.9 8.8e-98
CCDS81885.1 PYGO1 gene_id:26108|Hs109|chr15        ( 419) 2883 343.6 2.1e-94
CCDS1075.1 PYGO2 gene_id:90780|Hs109|chr1          ( 406)  556 76.6 5.1e-14


>>CCDS10155.1 PYGO1 gene_id:26108|Hs109|chr15             (419 aa)
 initn: 2981 init1: 2981 opt: 2981  Z-score: 1869.2  bits: 354.9 E(33420): 8.8e-98
Smith-Waterman score: 2981; 100.0% identity (100.0% similar) in 419 aa overlap (1-419:1-419)

               10        20        30        40        50        60
pF1KB7 MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
              310       320       330       340       350       360

              370       380       390       400       410         
pF1KB7 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA
              370       380       390       400       410         

>>CCDS81885.1 PYGO1 gene_id:26108|Hs109|chr15             (419 aa)
 initn: 2883 init1: 2883 opt: 2883  Z-score: 1808.4  bits: 343.6 E(33420): 2.1e-94
Smith-Waterman score: 2883; 97.1% identity (97.6% similar) in 419 aa overlap (1-419:1-419)

               10        20        30        40        50        60
pF1KB7 MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
       : ::.   :      .::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MSAEQEKDPISLKRVRGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
              310       320       330       340       350       360

              370       380       390       400       410         
pF1KB7 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA
              370       380       390       400       410         

>>CCDS1075.1 PYGO2 gene_id:90780|Hs109|chr1               (406 aa)
 initn: 634 init1: 407 opt: 556  Z-score: 365.4  bits: 76.6 E(33420): 5.1e-14
Smith-Waterman score: 874; 37.6% identity (59.2% similar) in 431 aa overlap (3-418:2-405)

               10               20        30        40        50   
pF1KB7 MPAENSPAPAYKVSSHGGD-------SGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLS
         : ..: :  :. . ::        :     :  :.:. ::.::.::.:::::..  :.
CCDS10  MAASAPPPPDKLEGGGGPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLT
                10        20        30        40        50         

            60        70        80        90       100        110  
pF1KB7 EYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFR-MPPHVPP
       :.::::.:  :::::.:::.:...  . :   .. :.::   : :::. .   :  .:::
CCDS10 EFAPPPTPMVDHLVASNPFEDDFG--APKVGVAAPPFLGSPVP-FGGFRVQGGMAGQVPP
      60        70        80          90       100        110      

            120        130       140        150       160       170
pF1KB7 RMSSPYCG-PYSLRNQPHPFPQNPLGMGFNRP-HAFNFGPHDNSSFGNPSYNNALSQNVN
        .:.   : :  :: :: ::: ::.: .:: : .. .. :  : .: .  .:. :.:: .
CCDS10 GYSTGGGGGPQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNFS
        120       130       140       150       160       170      

              180       190       200       210       220       230
pF1KB7 MPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFG
        :. ..  .:. .:.   :. .  ...:  :            .:   .. :  :   ::
CCDS10 PPSGQMMPGPVGGFG---PMISPTMGQPPRAE----------LGPPSLSQRFAQPGAPFG
        180       190          200                 210       220   

              240       250        260       270       280         
pF1KB7 QAKAPPPKQDFTQGATKNTNQNSSAHP-PHLNMDDTVNQSNIELKNVNRNNAVNQENSRS
           : : :   ::   .   :.:  : :  ..    .... .  :   ..:  ::   .
CCDS10 ----PSPLQRPGQG-LPSLPPNTSPFPGPDPGFPGPGGEDGGKPLNPPASTAFPQEPHSG
               230        240       250       260       270        

     290       300       310       320       330           340     
pF1KB7 SSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDP----VYPCGI
       : . :.:.:  .   :.  .  :. :: .    .:..      : :. .:    ::::: 
CCDS10 SPAAAVNGNQPSFPPNSSGRGGGTPDANSLAPPGKAG------GGSGPQPPPGLVYPCGA
      280       290       300       310             320       330  

         350       360       370       380       390       400     
pF1KB7 CTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMR
       : .::::::::::::::::::::: ::::::.::::::.::::::.:: :.  :..: . 
CCDS10 CRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEIQSVY
            340       350       360       370       380       390  

         410         
pF1KB7 TRETFGPSAVGSDA
        :: .:  ....: 
CCDS10 IREGMGQLVAANDG
            400      




419 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Oct 24 21:57:08 2019 done: Thu Oct 24 21:57:08 2019
 Total Scan time:  1.560 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]