Result of FASTA (omim) for
pF1KB7270
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7270, 213 aa
1>>>pF1KB7270 213 - 213 aa - 213 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9949+/-0.0003; mu= 2.2919+/- 0.019
mean_var=144.7930+/-29.773, 0's: 0 Z-trim(121.4): 23 B-trim: 284 in 1/57
Lambda= 0.106586
statistics sampled from 37865 (37888) to 37865 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.444), width: 16
Scan time: 6.380
The best scores are: opt bits E(85289)
NP_001265173 (OMIM: 604761) AN1-type zinc finger p ( 213) 1457 234.6 9.4e-62
NP_001095890 (OMIM: 604761) AN1-type zinc finger p ( 213) 1457 234.6 9.4e-62
NP_005998 (OMIM: 604761) AN1-type zinc finger prot ( 213) 1457 234.6 9.4e-62
NP_001095891 (OMIM: 604761) AN1-type zinc finger p ( 213) 1457 234.6 9.4e-62
NP_001265172 (OMIM: 604761) AN1-type zinc finger p ( 213) 1457 234.6 9.4e-62
NP_001265174 (OMIM: 604761) AN1-type zinc finger p ( 213) 1457 234.6 9.4e-62
NP_001229841 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
NP_001229844 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
NP_001229840 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
NP_061879 (OMIM: 610183) AN1-type zinc finger prot ( 208) 783 130.9 1.5e-30
NP_001229842 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
NP_001229843 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
NP_001229845 (OMIM: 610183) AN1-type zinc finger p ( 208) 783 130.9 1.5e-30
XP_011519986 (OMIM: 610183) PREDICTED: AN1-type zi ( 208) 783 130.9 1.5e-30
NP_001229846 (OMIM: 610183) AN1-type zinc finger p ( 196) 484 84.9 9.6e-17
NP_001229848 (OMIM: 610183) AN1-type zinc finger p ( 181) 482 84.6 1.1e-16
NP_001229847 (OMIM: 610183) AN1-type zinc finger p ( 170) 315 58.9 5.7e-09
NP_068762 (OMIM: 607455) AN1-type zinc finger prot ( 227) 257 50.1 3.5e-06
XP_005249326 (OMIM: 607455) PREDICTED: AN1-type zi ( 205) 211 43.0 0.00043
XP_016866660 (OMIM: 607455) PREDICTED: AN1-type zi ( 211) 194 40.4 0.0027
>>NP_001265173 (OMIM: 604761) AN1-type zinc finger prote (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_001 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_001095890 (OMIM: 604761) AN1-type zinc finger prote (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_001 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_005998 (OMIM: 604761) AN1-type zinc finger protein (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_005 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_001095891 (OMIM: 604761) AN1-type zinc finger prote (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_001 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_001265172 (OMIM: 604761) AN1-type zinc finger prote (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_001 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_001265174 (OMIM: 604761) AN1-type zinc finger prote (213 aa)
initn: 1457 init1: 1457 opt: 1457 Z-score: 1229.6 bits: 234.6 E(85289): 9.4e-62
Smith-Waterman score: 1457; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
130 140 150 160 170 180
190 200 210
pF1KB7 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
:::::::::::::::::::::::::::::::::
NP_001 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
190 200 210
>>NP_001229841 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 830 init1: 415 opt: 783 Z-score: 669.7 bits: 130.9 E(85289): 1.5e-30
Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208)
10 20 30 40 50
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
::::::.. :::::::::::::::::::::::::::::::..: ::.:: .: : :
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
:.: :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :.
NP_001 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
.: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..::
NP_001 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
120 130 140 150 160 170
180 190 200 210
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
.::::: ::: :.:::.:: ::::::::::.::::.:
NP_001 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
180 190 200
>>NP_001229844 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 830 init1: 415 opt: 783 Z-score: 669.7 bits: 130.9 E(85289): 1.5e-30
Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208)
10 20 30 40 50
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
::::::.. :::::::::::::::::::::::::::::::..: ::.:: .: : :
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
:.: :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :.
NP_001 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
.: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..::
NP_001 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
120 130 140 150 160 170
180 190 200 210
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
.::::: ::: :.:::.:: ::::::::::.::::.:
NP_001 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
180 190 200
>>NP_001229840 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 830 init1: 415 opt: 783 Z-score: 669.7 bits: 130.9 E(85289): 1.5e-30
Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208)
10 20 30 40 50
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
::::::.. :::::::::::::::::::::::::::::::..: ::.:: .: : :
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
:.: :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :.
NP_001 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
.: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..::
NP_001 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
120 130 140 150 160 170
180 190 200 210
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
.::::: ::: :.:::.:: ::::::::::.::::.:
NP_001 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
180 190 200
>>NP_061879 (OMIM: 610183) AN1-type zinc finger protein (208 aa)
initn: 830 init1: 415 opt: 783 Z-score: 669.7 bits: 130.9 E(85289): 1.5e-30
Smith-Waterman score: 783; 58.5% identity (76.5% similar) in 217 aa overlap (1-213:1-208)
10 20 30 40 50
pF1KB7 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP
::::::.. :::::::::::::::::::::::::::::::..: ::.:: .: : :
NP_061 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI--SREDKITTPKT
:.: :: .: :. . ..: ::: . . ::. .:.. :. :. :. .. :.
NP_061 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVS----NQSLLSESVASSQLDSTSVDKA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 -EVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCG
.: : .. : ...::: :: :. : :: :::::::::::::::::.:::::..::
NP_061 VPETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCG
120 130 140 150 160 170
180 190 200 210
pF1KB7 LHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
.::::: ::: :.:::.:: ::::::::::.::::.:
NP_061 VHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI
180 190 200
213 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 06:31:14 2016 done: Fri Nov 4 06:31:15 2016
Total Scan time: 6.380 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]